# Assembly name: ASM2146165v1 # Organism name: Schistosoma japonicum (flatworms) # Isolate: SjaV3_Hu # Sex: male # Taxid: 6182 # BioSample: SAMN19770425 # BioProject: PRJNA739049 # Submitter: Fudan University # Date: 2022-01-13 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAHRBV01 # Assembly method: canu v. 2.1 # Expected final version: yes # Genome coverage: 130.0x # Sequencing technology: PacBio Sequel # GenBank assembly accession: GCA_021461655.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_021461675.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name chr1 assembled-molecule 1 Chromosome CM038282.1 <> na Primary Assembly 90601500 na chr2 assembled-molecule 2 Chromosome CM038283.1 <> na Primary Assembly 48838407 na chr3 assembled-molecule 3 Chromosome CM038284.1 <> na Primary Assembly 48034102 na chr4 assembled-molecule 4 Chromosome CM038285.1 <> na Primary Assembly 45248391 na chr5 assembled-molecule 5 Chromosome CM038286.1 <> na Primary Assembly 26832549 na chr6 assembled-molecule 6 Chromosome CM038287.1 <> na Primary Assembly 22864860 na chr7 assembled-molecule 7 Chromosome CM038288.1 <> na Primary Assembly 22146671 na chrZ assembled-molecule Z Chromosome CM038289.1 <> na Primary Assembly 87648737 na superscaf24 unplaced-scaffold na na JAHRBV010000024.1 <> na Primary Assembly 356000 na superscaf25 unplaced-scaffold na na JAHRBV010000025.1 <> na Primary Assembly 247500 na superscaf27 unplaced-scaffold na na JAHRBV010000027.1 <> na Primary Assembly 32891 na superscaf29 unplaced-scaffold na na JAHRBV010000029.1 <> na Primary Assembly 107500 na tig00000048_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000066.1 <> na Primary Assembly 4146 na tig00000048_pilon_pilon_11 unplaced-scaffold na na JAHRBV010000071.1 <> na Primary Assembly 25000 na tig00000048_pilon_pilon_13 unplaced-scaffold na na JAHRBV010000072.1 <> na Primary Assembly 25000 na tig00000048_pilon_pilon_15 unplaced-scaffold na na JAHRBV010000073.1 <> na Primary Assembly 14000 na tig00000048_pilon_pilon_16 unplaced-scaffold na na JAHRBV010000035.1 <> na Primary Assembly 50000 na tig00000048_pilon_pilon_17 unplaced-scaffold na na JAHRBV010000074.1 <> na Primary Assembly 4000 na tig00000048_pilon_pilon_19 unplaced-scaffold na na JAHRBV010000075.1 <> na Primary Assembly 9000 na tig00000048_pilon_pilon_21 unplaced-scaffold na na JAHRBV010000076.1 <> na Primary Assembly 25000 na tig00000048_pilon_pilon_23 unplaced-scaffold na na JAHRBV010000077.1 <> na Primary Assembly 50000 na tig00000048_pilon_pilon_25 unplaced-scaffold na na JAHRBV010000078.1 <> na Primary Assembly 25000 na tig00000048_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000067.1 <> na Primary Assembly 49602 na tig00000048_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000068.1 <> na Primary Assembly 54602 na tig00000048_pilon_pilon_7 unplaced-scaffold na na JAHRBV010000069.1 <> na Primary Assembly 1000 na tig00000048_pilon_pilon_9 unplaced-scaffold na na JAHRBV010000070.1 <> na Primary Assembly 4000 na tig00000240_pilon_pilon unplaced-scaffold na na JAHRBV010000314.1 <> na Primary Assembly 134420 na tig00000259:98512-140978_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000337.1 <> na Primary Assembly 18077 na tig00000329:84754-143029_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000336.1 <> na Primary Assembly 14507 na tig00000622:67343-3315238_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000190.1 <> na Primary Assembly 147363 na tig00001065_pilon_pilon_10 unplaced-scaffold na na JAHRBV010000211.1 <> na Primary Assembly 36256 na tig00001065_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000207.1 <> na Primary Assembly 13484 na tig00001065_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000208.1 <> na Primary Assembly 27000 na tig00001065_pilon_pilon_6 unplaced-scaffold na na JAHRBV010000209.1 <> na Primary Assembly 5516 na tig00001065_pilon_pilon_8 unplaced-scaffold na na JAHRBV010000210.1 <> na Primary Assembly 150000 na tig00001137_pilon_pilon unplaced-scaffold na na JAHRBV010000320.1 <> na Primary Assembly 123041 na tig00001148_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000112.1 <> na Primary Assembly 46513 na tig00001148_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000022.1 <> na Primary Assembly 26487 na tig00001148_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000113.1 <> na Primary Assembly 4000 na tig00001148_pilon_pilon_6 unplaced-scaffold na na JAHRBV010000114.1 <> na Primary Assembly 3000 na tig00001148_pilon_pilon_8 unplaced-scaffold na na JAHRBV010000115.1 <> na Primary Assembly 25000 na tig00001278_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000116.1 <> na Primary Assembly 7895 na tig00001278_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000117.1 <> na Primary Assembly 33000 na tig00001278_pilon_pilon_6 unplaced-scaffold na na JAHRBV010000118.1 <> na Primary Assembly 17091 na tig00001350_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000306.1 <> na Primary Assembly 4549 na tig00001350_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000307.1 <> na Primary Assembly 68000 na tig00001350_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000308.1 <> na Primary Assembly 17095 na tig00001467_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000127.1 <> na Primary Assembly 37398 na tig00001467_pilon_pilon_11 unplaced-scaffold na na JAHRBV010000132.1 <> na Primary Assembly 19056 na tig00001467_pilon_pilon_13 unplaced-scaffold na na JAHRBV010000133.1 <> na Primary Assembly 33000 na tig00001467_pilon_pilon_15 unplaced-scaffold na na JAHRBV010000134.1 <> na Primary Assembly 344255 na tig00001467_pilon_pilon_17 unplaced-scaffold na na JAHRBV010000135.1 <> na Primary Assembly 6000 na tig00001467_pilon_pilon_19 unplaced-scaffold na na JAHRBV010000136.1 <> na Primary Assembly 20056 na tig00001467_pilon_pilon_21 unplaced-scaffold na na JAHRBV010000137.1 <> na Primary Assembly 98000 na tig00001467_pilon_pilon_23 unplaced-scaffold na na JAHRBV010000138.1 <> na Primary Assembly 1000 na tig00001467_pilon_pilon_25 unplaced-scaffold na na JAHRBV010000139.1 <> na Primary Assembly 19000 na tig00001467_pilon_pilon_27 unplaced-scaffold na na JAHRBV010000140.1 <> na Primary Assembly 25000 na tig00001467_pilon_pilon_29 unplaced-scaffold na na JAHRBV010000141.1 <> na Primary Assembly 75000 na tig00001467_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000128.1 <> na Primary Assembly 8056 na tig00001467_pilon_pilon_31 unplaced-scaffold na na JAHRBV010000142.1 <> na Primary Assembly 25000 na tig00001467_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000129.1 <> na Primary Assembly 14000 na tig00001467_pilon_pilon_7 unplaced-scaffold na na JAHRBV010000130.1 <> na Primary Assembly 41000 na tig00001467_pilon_pilon_9 unplaced-scaffold na na JAHRBV010000131.1 <> na Primary Assembly 4944 na tig00001685_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000147.1 <> na Primary Assembly 64875 na tig00001699_pilon_pilon unplaced-scaffold na na JAHRBV010000331.1 <> na Primary Assembly 76140 na tig00001711_pilon_pilon unplaced-scaffold na na JAHRBV010000304.1 <> na Primary Assembly 163497 na tig00001724_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000191.1 <> na Primary Assembly 50227 na tig00001724_pilon_pilon_11 unplaced-scaffold na na JAHRBV010000196.1 <> na Primary Assembly 17000 na tig00001724_pilon_pilon_13 unplaced-scaffold na na JAHRBV010000197.1 <> na Primary Assembly 88000 na tig00001724_pilon_pilon_15 unplaced-scaffold na na JAHRBV010000198.1 <> na Primary Assembly 33000 na tig00001724_pilon_pilon_16 unplaced-scaffold na na JAHRBV010000047.1 <> na Primary Assembly 16000 na tig00001724_pilon_pilon_17 unplaced-scaffold na na JAHRBV010000199.1 <> na Primary Assembly 55000 na tig00001724_pilon_pilon_19 unplaced-scaffold na na JAHRBV010000200.1 <> na Primary Assembly 19383 na tig00001724_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000192.1 <> na Primary Assembly 61478 na tig00001724_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000193.1 <> na Primary Assembly 38105 na tig00001724_pilon_pilon_7 unplaced-scaffold na na JAHRBV010000194.1 <> na Primary Assembly 68895 na tig00001724_pilon_pilon_8 unplaced-scaffold na na JAHRBV010000054.1 <> na Primary Assembly 18000 na tig00001724_pilon_pilon_9 unplaced-scaffold na na JAHRBV010000195.1 <> na Primary Assembly 6000 na tig00001780_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000143.1 <> na Primary Assembly 50000 na tig00001780_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000144.1 <> na Primary Assembly 125000 na tig00001780_pilon_pilon_6 unplaced-scaffold na na JAHRBV010000145.1 <> na Primary Assembly 25000 na tig00001780_pilon_pilon_8 unplaced-scaffold na na JAHRBV010000146.1 <> na Primary Assembly 15050 na tig00001842_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000148.1 <> na Primary Assembly 60957 na tig00001842_pilon_pilon_11 unplaced-scaffold na na JAHRBV010000153.1 <> na Primary Assembly 13000 na tig00001842_pilon_pilon_13 unplaced-scaffold na na JAHRBV010000154.1 <> na Primary Assembly 22000 na tig00001842_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000149.1 <> na Primary Assembly 24056 na tig00001842_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000150.1 <> na Primary Assembly 43000 na tig00001842_pilon_pilon_7 unplaced-scaffold na na JAHRBV010000151.1 <> na Primary Assembly 3000 na tig00001842_pilon_pilon_9 unplaced-scaffold na na JAHRBV010000152.1 <> na Primary Assembly 8000 na tig00001866:0-2149680_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000020.1 <> na Primary Assembly 50000 na tig00001866:0-2149680_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000229.1 <> na Primary Assembly 25000 na tig00001873_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000175.1 <> na Primary Assembly 4976 na tig00001975:82215-1071812_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000250.1 <> na Primary Assembly 6034 na tig00001975:82215-1071812_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000251.1 <> na Primary Assembly 50000 na tig00001975:82215-1071812_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000252.1 <> na Primary Assembly 5000 na tig00001975:82215-1071812_pilon_pilon_7 unplaced-scaffold na na JAHRBV010000253.1 <> na Primary Assembly 9745 na tig00001975:82215-1071812_pilon_pilon_9 unplaced-scaffold na na JAHRBV010000254.1 <> na Primary Assembly 95625 na tig00002159_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000257.1 <> na Primary Assembly 7000 na tig00002159_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000258.1 <> na Primary Assembly 68462 na tig00002159_pilon_pilon_6 unplaced-scaffold na na JAHRBV010000259.1 <> na Primary Assembly 77538 na tig00002159_pilon_pilon_8 unplaced-scaffold na na JAHRBV010000260.1 <> na Primary Assembly 92931 na tig00002168:31156-1898897_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000237.1 <> na Primary Assembly 52043 na tig00002168:31156-1898897_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000238.1 <> na Primary Assembly 25000 na tig00002168:31156-1898897_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000239.1 <> na Primary Assembly 78303 na tig00002174_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000189.1 <> na Primary Assembly 20641 na tig00002244_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000201.1 <> na Primary Assembly 1568 na tig00002244_pilon_pilon_11 unplaced-scaffold na na JAHRBV010000206.1 <> na Primary Assembly 144606 na tig00002244_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000202.1 <> na Primary Assembly 44105 na tig00002244_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000203.1 <> na Primary Assembly 40000 na tig00002244_pilon_pilon_7 unplaced-scaffold na na JAHRBV010000204.1 <> na Primary Assembly 268523 na tig00002244_pilon_pilon_9 unplaced-scaffold na na JAHRBV010000205.1 <> na Primary Assembly 6000 na tig00002250_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000187.1 <> na Primary Assembly 6070 na tig00002250_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000188.1 <> na Primary Assembly 25000 na tig00002339:0-186603_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000299.1 <> na Primary Assembly 52169 na tig00002356_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000335.1 <> na Primary Assembly 20333 na tig00002367_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000214.1 <> na Primary Assembly 81257 na tig00002367_pilon_pilon_11 unplaced-scaffold na na JAHRBV010000218.1 <> na Primary Assembly 25000 na tig00002367_pilon_pilon_13 unplaced-scaffold na na JAHRBV010000219.1 <> na Primary Assembly 3000 na tig00002367_pilon_pilon_15 unplaced-scaffold na na JAHRBV010000220.1 <> na Primary Assembly 25000 na tig00002367_pilon_pilon_17 unplaced-scaffold na na JAHRBV010000221.1 <> na Primary Assembly 25000 na tig00002367_pilon_pilon_19 unplaced-scaffold na na JAHRBV010000222.1 <> na Primary Assembly 50000 na tig00002367_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000215.1 <> na Primary Assembly 7000 na tig00002367_pilon_pilon_7 unplaced-scaffold na na JAHRBV010000216.1 <> na Primary Assembly 25000 na tig00002367_pilon_pilon_9 unplaced-scaffold na na JAHRBV010000217.1 <> na Primary Assembly 25000 na tig00002521_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000329.1 <> na Primary Assembly 12983 na tig00002521_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000330.1 <> na Primary Assembly 1000 na tig00002525_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000015.1 <> na Primary Assembly 19292 na tig00002525_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000016.1 <> na Primary Assembly 9000 na tig00002525_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000017.1 <> na Primary Assembly 12516 na tig00002525_pilon_pilon_7 unplaced-scaffold na na JAHRBV010000018.1 <> na Primary Assembly 2000 na tig00002525_pilon_pilon_9 unplaced-scaffold na na JAHRBV010000019.1 <> na Primary Assembly 20472 na tig00002720_pilon_pilon unplaced-scaffold na na JAHRBV010000032.1 <> na Primary Assembly 107651 na tig00003346_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000261.1 <> na Primary Assembly 54373 na tig00003346_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000262.1 <> na Primary Assembly 26125 na tig00003346_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000263.1 <> na Primary Assembly 90000 na tig00003364_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000301.1 <> na Primary Assembly 21202 na tig00003364_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000052.1 <> na Primary Assembly 22000 na tig00003364_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000302.1 <> na Primary Assembly 29724 na tig00003364_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000303.1 <> na Primary Assembly 42432 na tig00003504:0-409571_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000283.1 <> na Primary Assembly 20744 na tig00003526_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000270.1 <> na Primary Assembly 158017 na tig00003597_pilon_pilon unplaced-scaffold na na JAHRBV010000056.1 <> na Primary Assembly 225035 na tig00003617_pilon_pilon unplaced-scaffold na na JAHRBV010000321.1 <> na Primary Assembly 117583 na tig00003645_pilon_pilon unplaced-scaffold na na JAHRBV010000305.1 <> na Primary Assembly 163303 na tig00003688_pilon_pilon unplaced-scaffold na na JAHRBV010000058.1 <> na Primary Assembly 95781 na tig00003709_pilon_pilon unplaced-scaffold na na JAHRBV010000318.1 <> na Primary Assembly 129826 na tig00003753_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000275.1 <> na Primary Assembly 6000 na tig00003753_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000041.1 <> na Primary Assembly 50000 na tig00003753_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000276.1 <> na Primary Assembly 16000 na tig00003753_pilon_pilon_6 unplaced-scaffold na na JAHRBV010000277.1 <> na Primary Assembly 117000 na tig00003753_pilon_pilon_8 unplaced-scaffold na na JAHRBV010000278.1 <> na Primary Assembly 25000 na tig00003905_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000327.1 <> na Primary Assembly 52310 na tig00003943_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000284.1 <> na Primary Assembly 43152 na tig00003943_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000285.1 <> na Primary Assembly 6000 na tig00003943_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000286.1 <> na Primary Assembly 1000 na tig00004006_pilon_pilon unplaced-scaffold na na JAHRBV010000322.1 <> na Primary Assembly 107768 na tig00004027_pilon_pilon unplaced-scaffold na na JAHRBV010000324.1 <> na Primary Assembly 98787 na tig00004034_pilon_pilon unplaced-scaffold na na JAHRBV010000298.1 <> na Primary Assembly 193960 na tig00004035_pilon_pilon unplaced-scaffold na na JAHRBV010000333.1 <> na Primary Assembly 72731 na tig00004084:35334-255755_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000295.1 <> na Primary Assembly 123126 na tig00004141_pilon_pilon unplaced-scaffold na na JAHRBV010000323.1 <> na Primary Assembly 99792 na tig00004186_pilon_pilon unplaced-scaffold na na JAHRBV010000057.1 <> na Primary Assembly 106726 na tig00004221:0-210124_pilon_pilon unplaced-scaffold na na JAHRBV010000296.1 <> na Primary Assembly 206796 na tig00004232_pilon_pilon unplaced-scaffold na na JAHRBV010000038.1 <> na Primary Assembly 85791 na tig00004259_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000317.1 <> na Primary Assembly 42550 na tig00004294_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000293.1 <> na Primary Assembly 3014 na tig00004294_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000294.1 <> na Primary Assembly 125773 na tig00004360_pilon_pilon unplaced-scaffold na na JAHRBV010000059.1 <> na Primary Assembly 80816 na tig00004379_pilon_pilon unplaced-scaffold na na JAHRBV010000060.1 <> na Primary Assembly 70223 na tig00004409_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000309.1 <> na Primary Assembly 17516 na tig00004409_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000310.1 <> na Primary Assembly 74625 na tig00004428_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000300.1 <> na Primary Assembly 1593 na tig00004578_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000311.1 <> na Primary Assembly 125375 na tig00004578_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000312.1 <> na Primary Assembly 1694 na tig00004670_pilon_pilon unplaced-scaffold na na JAHRBV010000326.1 <> na Primary Assembly 95345 na tig00013654:0-140438_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000313.1 <> na Primary Assembly 93214 na tig00013657_pilon_pilon_10 unplaced-scaffold na na JAHRBV010000065.1 <> na Primary Assembly 70900 na tig00013657_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000061.1 <> na Primary Assembly 23000 na tig00013657_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000033.1 <> na Primary Assembly 25000 na tig00013657_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000062.1 <> na Primary Assembly 4000 na tig00013657_pilon_pilon_6 unplaced-scaffold na na JAHRBV010000063.1 <> na Primary Assembly 16000 na tig00013657_pilon_pilon_7 unplaced-scaffold na na JAHRBV010000034.1 <> na Primary Assembly 50000 na tig00013657_pilon_pilon_8 unplaced-scaffold na na JAHRBV010000064.1 <> na Primary Assembly 7000 na tig00013659_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000273.1 <> na Primary Assembly 37125 na tig00013659_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000274.1 <> na Primary Assembly 171219 na tig00013664_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000090.1 <> na Primary Assembly 5377 na tig00013664_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000030.1 <> na Primary Assembly 74000 na tig00013664_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000091.1 <> na Primary Assembly 14623 na tig00013668:12812-2799265_pilon_pilon_10 unplaced-scaffold na na JAHRBV010000227.1 <> na Primary Assembly 73000 na tig00013668:12812-2799265_pilon_pilon_11 unplaced-scaffold na na JAHRBV010000023.1 <> na Primary Assembly 20000 na tig00013668:12812-2799265_pilon_pilon_12 unplaced-scaffold na na JAHRBV010000228.1 <> na Primary Assembly 21000 na tig00013668:12812-2799265_pilon_pilon_14 unplaced-scaffold na na JAHRBV010000010.1 <> na Primary Assembly 102095 na tig00013668:12812-2799265_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000223.1 <> na Primary Assembly 10000 na tig00013668:12812-2799265_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000224.1 <> na Primary Assembly 7623 na tig00013668:12812-2799265_pilon_pilon_6 unplaced-scaffold na na JAHRBV010000225.1 <> na Primary Assembly 1000 na tig00013668:12812-2799265_pilon_pilon_8 unplaced-scaffold na na JAHRBV010000226.1 <> na Primary Assembly 3433 na tig00013672_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000083.1 <> na Primary Assembly 89006 na tig00013672_pilon_pilon_10 unplaced-scaffold na na JAHRBV010000051.1 <> na Primary Assembly 18000 na tig00013672_pilon_pilon_11 unplaced-scaffold na na JAHRBV010000088.1 <> na Primary Assembly 18000 na tig00013672_pilon_pilon_13 unplaced-scaffold na na JAHRBV010000089.1 <> na Primary Assembly 15461 na tig00013672_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000084.1 <> na Primary Assembly 8538 na tig00013672_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000021.1 <> na Primary Assembly 21000 na tig00013672_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000085.1 <> na Primary Assembly 158462 na tig00013672_pilon_pilon_7 unplaced-scaffold na na JAHRBV010000086.1 <> na Primary Assembly 14000 na tig00013672_pilon_pilon_9 unplaced-scaffold na na JAHRBV010000087.1 <> na Primary Assembly 14000 na tig00013674_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000092.1 <> na Primary Assembly 9539 na tig00013674_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000093.1 <> na Primary Assembly 268029 na tig00013674_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000028.1 <> na Primary Assembly 22000 na tig00013674_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000094.1 <> na Primary Assembly 67971 na tig00013674_pilon_pilon_7 unplaced-scaffold na na JAHRBV010000095.1 <> na Primary Assembly 1706 na tig00013677:0-1256841_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000246.1 <> na Primary Assembly 8298 na tig00013677:0-1256841_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000247.1 <> na Primary Assembly 26000 na tig00013677:0-1256841_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000248.1 <> na Primary Assembly 47000 na tig00013690_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000172.1 <> na Primary Assembly 6923 na tig00013694_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000249.1 <> na Primary Assembly 58264 na tig00013695:44716-533618_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000272.1 <> na Primary Assembly 1736 na tig00013698_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000096.1 <> na Primary Assembly 1702 na tig00013698_pilon_pilon_10 unplaced-scaffold na na JAHRBV010000049.1 <> na Primary Assembly 16000 na tig00013698_pilon_pilon_11 unplaced-scaffold na na JAHRBV010000101.1 <> na Primary Assembly 232000 na tig00013698_pilon_pilon_13 unplaced-scaffold na na JAHRBV010000102.1 <> na Primary Assembly 10493 na tig00013698_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000097.1 <> na Primary Assembly 7000 na tig00013698_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000098.1 <> na Primary Assembly 22000 na tig00013698_pilon_pilon_6 unplaced-scaffold na na JAHRBV010000045.1 <> na Primary Assembly 25000 na tig00013698_pilon_pilon_7 unplaced-scaffold na na JAHRBV010000099.1 <> na Primary Assembly 35000 na tig00013698_pilon_pilon_9 unplaced-scaffold na na JAHRBV010000100.1 <> na Primary Assembly 21000 na tig00013700_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000243.1 <> na Primary Assembly 2000 na tig00013700_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000042.1 <> na Primary Assembly 50000 na tig00013700_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000244.1 <> na Primary Assembly 15000 na tig00013703_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000183.1 <> na Primary Assembly 178755 na tig00013705_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000079.1 <> na Primary Assembly 10000 na tig00013705_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000046.1 <> na Primary Assembly 50000 na tig00013705_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000080.1 <> na Primary Assembly 5000 na tig00013705_pilon_pilon_6 unplaced-scaffold na na JAHRBV010000081.1 <> na Primary Assembly 27944 na tig00013705_pilon_pilon_8 unplaced-scaffold na na JAHRBV010000082.1 <> na Primary Assembly 47030 na tig00013710_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000240.1 <> na Primary Assembly 3000 na tig00013710_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000044.1 <> na Primary Assembly 25000 na tig00013710_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000241.1 <> na Primary Assembly 27000 na tig00013710_pilon_pilon_6 unplaced-scaffold na na JAHRBV010000242.1 <> na Primary Assembly 6000 na tig00013717_pilon_pilon_10 unplaced-scaffold na na JAHRBV010000111.1 <> na Primary Assembly 73484 na tig00013717_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000107.1 <> na Primary Assembly 19000 na tig00013717_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000040.1 <> na Primary Assembly 25000 na tig00013717_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000108.1 <> na Primary Assembly 13000 na tig00013717_pilon_pilon_6 unplaced-scaffold na na JAHRBV010000109.1 <> na Primary Assembly 48484 na tig00013717_pilon_pilon_7 unplaced-scaffold na na JAHRBV010000048.1 <> na Primary Assembly 17516 na tig00013717_pilon_pilon_8 unplaced-scaffold na na JAHRBV010000110.1 <> na Primary Assembly 25000 na tig00013722_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000178.1 <> na Primary Assembly 42227 na tig00013723_pilon_pilon unplaced-scaffold na na JAHRBV010000282.1 <> na Primary Assembly 419055 na tig00013724_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000212.1 <> na Primary Assembly 44100 na tig00013724_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000213.1 <> na Primary Assembly 146462 na tig00013725:51964-300132_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000292.1 <> na Primary Assembly 1028 na tig00013726_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000125.1 <> na Primary Assembly 26623 na tig00013726_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000031.1 <> na Primary Assembly 28000 na tig00013726_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000126.1 <> na Primary Assembly 9377 na tig00013727_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000271.1 <> na Primary Assembly 3972 na tig00013729:0-2053116_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000230.1 <> na Primary Assembly 25000 na tig00013730_pilon_pilon_10 unplaced-scaffold na na JAHRBV010000123.1 <> na Primary Assembly 38609 na tig00013730_pilon_pilon_12 unplaced-scaffold na na JAHRBV010000124.1 <> na Primary Assembly 17056 na tig00013730_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000119.1 <> na Primary Assembly 150000 na tig00013730_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000043.1 <> na Primary Assembly 18000 na tig00013730_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000120.1 <> na Primary Assembly 27056 na tig00013730_pilon_pilon_6 unplaced-scaffold na na JAHRBV010000121.1 <> na Primary Assembly 82335 na tig00013730_pilon_pilon_7 unplaced-scaffold na na JAHRBV010000026.1 <> na Primary Assembly 38000 na tig00013730_pilon_pilon_8 unplaced-scaffold na na JAHRBV010000122.1 <> na Primary Assembly 71609 na tig00013733_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000279.1 <> na Primary Assembly 132001 na tig00013733_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000280.1 <> na Primary Assembly 63000 na tig00013733_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000281.1 <> na Primary Assembly 66679 na tig00013734_pilon_pilon unplaced-scaffold na na JAHRBV010000328.1 <> na Primary Assembly 77678 na tig00013735_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000173.1 <> na Primary Assembly 62321 na tig00013735_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000174.1 <> na Primary Assembly 48637 na tig00013736_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000176.1 <> na Primary Assembly 17138 na tig00013736_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000177.1 <> na Primary Assembly 44349 na tig00013737_pilon_pilon unplaced-scaffold na na JAHRBV010000332.1 <> na Primary Assembly 75188 na tig00013738_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000179.1 <> na Primary Assembly 57651 na tig00013738_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000180.1 <> na Primary Assembly 4487 na tig00013738_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000181.1 <> na Primary Assembly 42513 na tig00013738_pilon_pilon_7 unplaced-scaffold na na JAHRBV010000182.1 <> na Primary Assembly 97000 na tig00013739_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000184.1 <> na Primary Assembly 73546 na tig00013739_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000185.1 <> na Primary Assembly 25000 na tig00013739_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000186.1 <> na Primary Assembly 51246 na tig00013742_pilon_pilon_10 unplaced-scaffold na na JAHRBV010000162.1 <> na Primary Assembly 42000 na tig00013742_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000158.1 <> na Primary Assembly 16125 na tig00013742_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000159.1 <> na Primary Assembly 4125 na tig00013742_pilon_pilon_6 unplaced-scaffold na na JAHRBV010000160.1 <> na Primary Assembly 4000 na tig00013742_pilon_pilon_8 unplaced-scaffold na na JAHRBV010000161.1 <> na Primary Assembly 35000 na tig00013744:45977-909648_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000255.1 <> na Primary Assembly 25000 na tig00013744:45977-909648_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000256.1 <> na Primary Assembly 46267 na tig00013753:60912-382316_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000287.1 <> na Primary Assembly 38125 na tig00013753:60912-382316_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000288.1 <> na Primary Assembly 3250 na tig00013755_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000014.1 <> na Primary Assembly 2831 na tig00013756:53089-317061_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000291.1 <> na Primary Assembly 1009 na tig00013759_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000245.1 <> na Primary Assembly 19745 na tig00013766_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000315.1 <> na Primary Assembly 95252 na tig00013766_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000316.1 <> na Primary Assembly 2441 na tig00013767_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000231.1 <> na Primary Assembly 6056 na tig00013767_pilon_pilon_10 unplaced-scaffold na na JAHRBV010000053.1 <> na Primary Assembly 16000 na tig00013767_pilon_pilon_11 unplaced-scaffold na na JAHRBV010000236.1 <> na Primary Assembly 71765 na tig00013767_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000232.1 <> na Primary Assembly 5000 na tig00013767_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000036.1 <> na Primary Assembly 50000 na tig00013767_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000233.1 <> na Primary Assembly 4000 na tig00013767_pilon_pilon_7 unplaced-scaffold na na JAHRBV010000234.1 <> na Primary Assembly 64000 na tig00013767_pilon_pilon_9 unplaced-scaffold na na JAHRBV010000235.1 <> na Primary Assembly 24000 na tig00013768_pilon_pilon unplaced-scaffold na na JAHRBV010000055.1 <> na Primary Assembly 523671 na tig00013769_pilon_pilon unplaced-scaffold na na JAHRBV010000334.1 <> na Primary Assembly 65692 na tig00083717_pilon_pilon_10 unplaced-scaffold na na JAHRBV010000167.1 <> na Primary Assembly 21484 na tig00083717_pilon_pilon_12 unplaced-scaffold na na JAHRBV010000168.1 <> na Primary Assembly 49000 na tig00083717_pilon_pilon_14 unplaced-scaffold na na JAHRBV010000169.1 <> na Primary Assembly 19516 na tig00083717_pilon_pilon_16 unplaced-scaffold na na JAHRBV010000170.1 <> na Primary Assembly 2000 na tig00083717_pilon_pilon_18 unplaced-scaffold na na JAHRBV010000171.1 <> na Primary Assembly 3841 na tig00083717_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000163.1 <> na Primary Assembly 14000 na tig00083717_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000039.1 <> na Primary Assembly 50000 na tig00083717_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000164.1 <> na Primary Assembly 19000 na tig00083717_pilon_pilon_6 unplaced-scaffold na na JAHRBV010000165.1 <> na Primary Assembly 30516 na tig00083717_pilon_pilon_8 unplaced-scaffold na na JAHRBV010000166.1 <> na Primary Assembly 5000 na tig00083762_pilon_pilon_2 unplaced-scaffold na na JAHRBV010000103.1 <> na Primary Assembly 1000 na tig00083762_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000050.1 <> na Primary Assembly 17000 na tig00083762_pilon_pilon_4 unplaced-scaffold na na JAHRBV010000104.1 <> na Primary Assembly 47000 na tig00083762_pilon_pilon_6 unplaced-scaffold na na JAHRBV010000105.1 <> na Primary Assembly 31609 na tig00083762_pilon_pilon_8 unplaced-scaffold na na JAHRBV010000106.1 <> na Primary Assembly 7753 na tig00083791:0-4766028_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000155.1 <> na Primary Assembly 21798 na tig00083791:0-4766028_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000156.1 <> na Primary Assembly 25000 na tig00083791:0-4766028_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000157.1 <> na Primary Assembly 25000 na tig00083837_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000011.1 <> na Primary Assembly 4708 na tig00083837_pilon_pilon_15 unplaced-scaffold na na JAHRBV010000012.1 <> na Primary Assembly 14484 na tig00083837_pilon_pilon_17 unplaced-scaffold na na JAHRBV010000013.1 <> na Primary Assembly 3159 na tig00083837_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000009.1 <> na Primary Assembly 7000 na tig00083905_pilon_pilon unplaced-scaffold na na JAHRBV010000297.1 <> na Primary Assembly 194651 na tig00083907_pilon_pilon unplaced-scaffold na na JAHRBV010000319.1 <> na Primary Assembly 129703 na tig00083911_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000264.1 <> na Primary Assembly 43763 na tig00083911_pilon_pilon_11 unplaced-scaffold na na JAHRBV010000269.1 <> na Primary Assembly 150793 na tig00083911_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000265.1 <> na Primary Assembly 17318 na tig00083911_pilon_pilon_5 unplaced-scaffold na na JAHRBV010000266.1 <> na Primary Assembly 35750 na tig00083911_pilon_pilon_7 unplaced-scaffold na na JAHRBV010000267.1 <> na Primary Assembly 25125 na tig00083911_pilon_pilon_8 unplaced-scaffold na na JAHRBV010000037.1 <> na Primary Assembly 25000 na tig00083911_pilon_pilon_9 unplaced-scaffold na na JAHRBV010000268.1 <> na Primary Assembly 13754 na tig00083912_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000325.1 <> na Primary Assembly 75724 na tig00083929_pilon_pilon_1 unplaced-scaffold na na JAHRBV010000289.1 <> na Primary Assembly 8362 na tig00083929_pilon_pilon_3 unplaced-scaffold na na JAHRBV010000290.1 <> na Primary Assembly 227011 na