# Assembly name: HG01109_pat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG01109 # Sex: female # Taxid: 9606 # BioSample: SAMN12162846 # BioProject: PRJNA727362 # Submitter: UCSC Genomics Institute # Date: 2024-10-17 # Assembly type: haploid (paternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAHEPA02 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 41x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_018504645.2 # Linked assembly: GCA_018504365.2 (maternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018504775.2 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG01109#1#h1tg000008l assembled-molecule 2 Chromosome CM092085.1 <> na Primary Assembly 242287352 na HG01109#1#h1tg000002l assembled-molecule 4 Chromosome CM092086.1 <> na Primary Assembly 190106173 na HG01109#1#h1tg000007l assembled-molecule 6 Chromosome CM092087.1 <> na Primary Assembly 171851687 na HG01109#1#h1tg000009l assembled-molecule 7 Chromosome CM092088.1 <> na Primary Assembly 158940567 na HG01109#1#h1tg000020l assembled-molecule 8 Chromosome CM092089.1 <> na Primary Assembly 145712508 na HG01109#1#h1tg000004l assembled-molecule 9 Chromosome CM092090.1 <> na Primary Assembly 134252357 na HG01109#1#h1tg000005l assembled-molecule 10 Chromosome CM092091.1 <> na Primary Assembly 134373067 na HG01109#1#h1tg000023l assembled-molecule 12 Chromosome CM092092.1 <> na Primary Assembly 133576281 na HG01109#1#h1tg000006l assembled-molecule 16 Chromosome CM092093.1 <> na Primary Assembly 90267772 na HG01109#1#h1tg000018l assembled-molecule 17 Chromosome CM092094.1 <> na Primary Assembly 83517129 na HG01109#1#h1tg000029l assembled-molecule 19 Chromosome CM092095.1 <> na Primary Assembly 61422232 na HG01109#1#h1tg000013l assembled-molecule 20 Chromosome CM092096.1 <> na Primary Assembly 66830472 na HG01109#1#h1tg000003l unplaced-scaffold na na JAHEPA020000001.1 <> na Primary Assembly 111063775 na HG01109#1#h1tg000014l unplaced-scaffold na na JAHEPA020000003.1 <> na Primary Assembly 92900355 na HG01109#1#h1tg000015l unplaced-scaffold na na JAHEPA020000004.1 <> na Primary Assembly 95241757 na HG01109#1#h1tg000016l unplaced-scaffold na na JAHEPA020000005.1 <> na Primary Assembly 98067334 na HG01109#1#h1tg000017l unplaced-scaffold na na JAHEPA020000006.1 <> na Primary Assembly 124011618 na HG01109#1#h1tg000022l unplaced-scaffold na na JAHEPA020000009.1 <> na Primary Assembly 34621103 na HG01109#1#h1tg000028l unplaced-scaffold na na JAHEPA020000010.1 <> na Primary Assembly 96636001 na HG01109#1#h1tg000030l unplaced-scaffold na na JAHEPA020000011.1 <> na Primary Assembly 12656933 na HG01109#1#h1tg000031l unplaced-scaffold na na JAHEPA020000012.1 <> na Primary Assembly 44110797 na HG01109#1#h1tg000034l unplaced-scaffold na na JAHEPA020000013.1 <> na Primary Assembly 66450 na HG01109#1#h1tg000035l unplaced-scaffold na na JAHEPA020000014.1 <> na Primary Assembly 1019560 na HG01109#1#h1tg000037l unplaced-scaffold na na JAHEPA020000015.1 <> na Primary Assembly 6548359 na HG01109#1#h1tg000038l unplaced-scaffold na na JAHEPA020000016.1 <> na Primary Assembly 3716988 na HG01109#1#h1tg000040l unplaced-scaffold na na JAHEPA020000017.1 <> na Primary Assembly 1331749 na HG01109#1#h1tg000041l unplaced-scaffold na na JAHEPA020000018.1 <> na Primary Assembly 164684 na HG01109#1#h1tg000042l unplaced-scaffold na na JAHEPA020000019.1 <> na Primary Assembly 5373856 na HG01109#1#h1tg000043l unplaced-scaffold na na JAHEPA020000020.1 <> na Primary Assembly 7386792 na HG01109#1#h1tg000044l unplaced-scaffold na na JAHEPA020000021.1 <> na Primary Assembly 1673743 na HG01109#1#h1tg000047l unplaced-scaffold na na JAHEPA020000022.1 <> na Primary Assembly 1047166 na HG01109#1#h1tg000050l unplaced-scaffold na na JAHEPA020000023.1 <> na Primary Assembly 197077 na HG01109#1#h1tg000054l unplaced-scaffold na na JAHEPA020000024.1 <> na Primary Assembly 395378 na HG01109#1#h1tg000055l unplaced-scaffold na na JAHEPA020000025.1 <> na Primary Assembly 276355 na HG01109#1#h1tg000058l unplaced-scaffold na na JAHEPA020000026.1 <> na Primary Assembly 255576 na HG01109#1#h1tg000060l unplaced-scaffold na na JAHEPA020000027.1 <> na Primary Assembly 135043 na HG01109#1#h1tg000063l unplaced-scaffold na na JAHEPA020000028.1 <> na Primary Assembly 1396432 na HG01109#1#h1tg000067l unplaced-scaffold na na JAHEPA020000029.1 <> na Primary Assembly 60512 na HG01109#1#h1tg000068l unplaced-scaffold na na JAHEPA020000030.1 <> na Primary Assembly 1103375 na HG01109#1#h1tg000071l unplaced-scaffold na na JAHEPA020000031.1 <> na Primary Assembly 175718 na HG01109#1#h1tg000073l unplaced-scaffold na na JAHEPA020000032.1 <> na Primary Assembly 236379 na HG01109#1#h1tg000074l unplaced-scaffold na na JAHEPA020000033.1 <> na Primary Assembly 263553 na HG01109#1#h1tg000075l unplaced-scaffold na na JAHEPA020000034.1 <> na Primary Assembly 52655 na HG01109#1#h1tg000078l unplaced-scaffold na na JAHEPA020000035.1 <> na Primary Assembly 472094 na HG01109#1#h1tg000081l unplaced-scaffold na na JAHEPA020000036.1 <> na Primary Assembly 87389 na HG01109#1#h1tg000086l unplaced-scaffold na na JAHEPA020000037.1 <> na Primary Assembly 130959 na HG01109#1#h1tg000090l unplaced-scaffold na na JAHEPA020000038.1 <> na Primary Assembly 66693 na HG01109#1#h1tg000093l unplaced-scaffold na na JAHEPA020000039.1 <> na Primary Assembly 63547 na HG01109#1#h1tg000098l unplaced-scaffold na na JAHEPA020000040.1 <> na Primary Assembly 425936 na HG01109#1#h1tg000099l unplaced-scaffold na na JAHEPA020000041.1 <> na Primary Assembly 57613 na HG01109#1#h1tg000101l unplaced-scaffold na na JAHEPA020000042.1 <> na Primary Assembly 51587 na HG01109#1#h1tg000102l unplaced-scaffold na na JAHEPA020000043.1 <> na Primary Assembly 310767 na HG01109#1#h1tg000103l unplaced-scaffold na na JAHEPA020000044.1 <> na Primary Assembly 177591 na HG01109#1#h1tg000111l unplaced-scaffold na na JAHEPA020000045.1 <> na Primary Assembly 195846 na HG01109#1#h1tg000125l unplaced-scaffold na na JAHEPA020000046.1 <> na Primary Assembly 53676 na HG01109#1#h1tg000133l unplaced-scaffold na na JAHEPA020000047.1 <> na Primary Assembly 61366 na HG01109#1#h1tg000136l unplaced-scaffold na na JAHEPA020000048.1 <> na Primary Assembly 93096 na HG01109#1#h1tg000137l unplaced-scaffold na na JAHEPA020000049.1 <> na Primary Assembly 66734 na HG01109#1#h1tg000139l unplaced-scaffold na na JAHEPA020000050.1 <> na Primary Assembly 74626 na HG01109#1#h1tg000140l unplaced-scaffold na na JAHEPA020000051.1 <> na Primary Assembly 50447 na HG01109#1#h1tg000146l unplaced-scaffold na na JAHEPA020000052.1 <> na Primary Assembly 77503 na HG01109#1#h1tg000148l unplaced-scaffold na na JAHEPA020000053.1 <> na Primary Assembly 65278 na HG01109#1#h1tg000149l unplaced-scaffold na na JAHEPA020000054.1 <> na Primary Assembly 51881 na HG01109#1#h1tg000001l unplaced-scaffold na na JAHEPA020000055.1 <> na Primary Assembly 101769362 na HG01109#1#h1tg000010l unplaced-scaffold na na JAHEPA020000062.1 <> na Primary Assembly 85650688 na HG01109#1#h1tg000011l unplaced-scaffold na na JAHEPA020000063.1 <> na Primary Assembly 24081415 na HG01109#1#h1tg000012l unplaced-scaffold na na JAHEPA020000064.1 <> na Primary Assembly 40905547 na HG01109#1#h1tg000019l unplaced-scaffold na na JAHEPA020000066.1 <> na Primary Assembly 12854517 na HG01109#1#h1tg000021l unplaced-scaffold na na JAHEPA020000067.1 <> na Primary Assembly 106693778 na HG01109#1#h1tg000024l unplaced-scaffold na na JAHEPA020000069.1 <> na Primary Assembly 14429074 na HG01109#1#h1tg000025l unplaced-scaffold na na JAHEPA020000070.1 <> na Primary Assembly 71090094 na HG01109#1#h1tg000026l unplaced-scaffold na na JAHEPA020000071.1 <> na Primary Assembly 61889232 na HG01109#1#h1tg000027l unplaced-scaffold na na JAHEPA020000072.1 <> na Primary Assembly 18656826 na HG01109#1#h1tg000032l unplaced-scaffold na na JAHEPA020000074.1 <> na Primary Assembly 213278 na HG01109#1#h1tg000033l unplaced-scaffold na na JAHEPA020000075.1 <> na Primary Assembly 647624 na HG01109#1#h1tg000036l unplaced-scaffold na na JAHEPA020000076.1 <> na Primary Assembly 1829977 na HG01109#1#h1tg000039l unplaced-scaffold na na JAHEPA020000077.1 <> na Primary Assembly 4028864 na HG01109#1#h1tg000045l unplaced-scaffold na na JAHEPA020000078.1 <> na Primary Assembly 921754 na HG01109#1#h1tg000046l unplaced-scaffold na na JAHEPA020000079.1 <> na Primary Assembly 1112803 na HG01109#1#h1tg000048l unplaced-scaffold na na JAHEPA020000080.1 <> na Primary Assembly 703252 na HG01109#1#h1tg000049l unplaced-scaffold na na JAHEPA020000081.1 <> na Primary Assembly 701773 na HG01109#1#h1tg000053l unplaced-scaffold na na JAHEPA020000082.1 <> na Primary Assembly 1451849 na HG01109#1#h1tg000056l unplaced-scaffold na na JAHEPA020000083.1 <> na Primary Assembly 171628 na HG01109#1#h1tg000057l unplaced-scaffold na na JAHEPA020000084.1 <> na Primary Assembly 79435 na HG01109#1#h1tg000059l unplaced-scaffold na na JAHEPA020000085.1 <> na Primary Assembly 591751 na HG01109#1#h1tg000061l unplaced-scaffold na na JAHEPA020000086.1 <> na Primary Assembly 136609 na HG01109#1#h1tg000062l unplaced-scaffold na na JAHEPA020000087.1 <> na Primary Assembly 153313 na HG01109#1#h1tg000064l unplaced-scaffold na na JAHEPA020000088.1 <> na Primary Assembly 203043 na HG01109#1#h1tg000065l unplaced-scaffold na na JAHEPA020000089.1 <> na Primary Assembly 1664504 na HG01109#1#h1tg000066l unplaced-scaffold na na JAHEPA020000090.1 <> na Primary Assembly 379509 na HG01109#1#h1tg000076l unplaced-scaffold na na JAHEPA020000091.1 <> na Primary Assembly 263238 na HG01109#1#h1tg000077l unplaced-scaffold na na JAHEPA020000092.1 <> na Primary Assembly 395136 na HG01109#1#h1tg000079l unplaced-scaffold na na JAHEPA020000093.1 <> na Primary Assembly 345405 na HG01109#1#h1tg000080l unplaced-scaffold na na JAHEPA020000094.1 <> na Primary Assembly 130443 na HG01109#1#h1tg000082l unplaced-scaffold na na JAHEPA020000095.1 <> na Primary Assembly 107654 na HG01109#1#h1tg000083l unplaced-scaffold na na JAHEPA020000096.1 <> na Primary Assembly 99779 na HG01109#1#h1tg000085l unplaced-scaffold na na JAHEPA020000097.1 <> na Primary Assembly 85034 na HG01109#1#h1tg000088l unplaced-scaffold na na JAHEPA020000098.1 <> na Primary Assembly 716066 na HG01109#1#h1tg000094l unplaced-scaffold na na JAHEPA020000099.1 <> na Primary Assembly 52560 na HG01109#1#h1tg000095l unplaced-scaffold na na JAHEPA020000100.1 <> na Primary Assembly 113057 na HG01109#1#h1tg000097l unplaced-scaffold na na JAHEPA020000101.1 <> na Primary Assembly 59343 na HG01109#1#h1tg000100l unplaced-scaffold na na JAHEPA020000102.1 <> na Primary Assembly 153210 na HG01109#1#h1tg000105l unplaced-scaffold na na JAHEPA020000103.1 <> na Primary Assembly 301017 na HG01109#1#h1tg000108l unplaced-scaffold na na JAHEPA020000104.1 <> na Primary Assembly 235442 na HG01109#1#h1tg000110l unplaced-scaffold na na JAHEPA020000105.1 <> na Primary Assembly 63424 na HG01109#1#h1tg000112l unplaced-scaffold na na JAHEPA020000106.1 <> na Primary Assembly 169708 na HG01109#1#h1tg000113l unplaced-scaffold na na JAHEPA020000107.1 <> na Primary Assembly 72470 na HG01109#1#h1tg000118l unplaced-scaffold na na JAHEPA020000108.1 <> na Primary Assembly 230508 na HG01109#1#h1tg000120l unplaced-scaffold na na JAHEPA020000109.1 <> na Primary Assembly 89882 na HG01109#1#h1tg000121l unplaced-scaffold na na JAHEPA020000110.1 <> na Primary Assembly 74578 na HG01109#1#h1tg000122l unplaced-scaffold na na JAHEPA020000111.1 <> na Primary Assembly 88794 na HG01109#1#h1tg000123l unplaced-scaffold na na JAHEPA020000112.1 <> na Primary Assembly 91505 na HG01109#1#h1tg000127l unplaced-scaffold na na JAHEPA020000113.1 <> na Primary Assembly 55847 na HG01109#1#h1tg000128l unplaced-scaffold na na JAHEPA020000114.1 <> na Primary Assembly 50343 na HG01109#1#h1tg000129l unplaced-scaffold na na JAHEPA020000115.1 <> na Primary Assembly 58592 na HG01109#1#h1tg000130l unplaced-scaffold na na JAHEPA020000116.1 <> na Primary Assembly 53786 na HG01109#1#h1tg000134l unplaced-scaffold na na JAHEPA020000117.1 <> na Primary Assembly 94576 na HG01109#1#h1tg000138l unplaced-scaffold na na JAHEPA020000118.1 <> na Primary Assembly 333621 na HG01109#1#h1tg000142l unplaced-scaffold na na JAHEPA020000119.1 <> na Primary Assembly 89783 na