# Assembly name: HG01109_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG01109 # Sex: female # Taxid: 9606 # BioSample: SAMN12162846 # BioProject: PRJNA727363 # Submitter: UCSC Genomics Institute # Date: 2024-10-17 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAHEOZ02 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 41x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_018504365.2 # Linked assembly: GCA_018504645.2 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018504385.2 Primary Assembly ## GCA_018504435.2 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG01109#2#h2tg000006l assembled-molecule 2 Chromosome CM092073.1 <> na Primary Assembly 241369328 na HG01109#2#h2tg000020l assembled-molecule 5 Chromosome CM092074.1 <> na Primary Assembly 182936472 na HG01109#2#h2tg000019l assembled-molecule 6 Chromosome CM092075.1 <> na Primary Assembly 172025397 na HG01109#2#h2tg000001l assembled-molecule 7 Chromosome CM092076.1 <> na Primary Assembly 161384569 na HG01109#2#h2tg000004l assembled-molecule 8 Chromosome CM092077.1 <> na Primary Assembly 145897286 na HG01109#2#h2tg000010l assembled-molecule 9 Chromosome CM092078.1 <> na Primary Assembly 139045498 na HG01109#2#h2tg000005l assembled-molecule 10 Chromosome CM092079.1 <> na Primary Assembly 134295924 na HG01109#2#h2tg000007l assembled-molecule 11 Chromosome CM092080.1 <> na Primary Assembly 134671460 na HG01109#2#h2tg000011l assembled-molecule 12 Chromosome CM092081.1 <> na Primary Assembly 133120182 na HG01109#2#h2tg000008l assembled-molecule 17 Chromosome CM092082.1 <> na Primary Assembly 84387795 na HG01109#2#h2tg000022l assembled-molecule 19 Chromosome CM092083.1 <> na Primary Assembly 61914030 na HG01109#2#h2tg000021l assembled-molecule 20 Chromosome CM092084.1 <> na Primary Assembly 66819775 na HG01109#2#h2tg000002l unplaced-scaffold na na JAHEOZ020000001.1 <> na Primary Assembly 139254334 na HG01109#2#h2tg000003l unplaced-scaffold na na JAHEOZ020000002.1 <> na Primary Assembly 93252780 na HG01109#2#h2tg000009l unplaced-scaffold na na JAHEOZ020000005.1 <> na Primary Assembly 98144731 na HG01109#2#h2tg000013l unplaced-scaffold na na JAHEOZ020000008.1 <> na Primary Assembly 40081089 na HG01109#2#h2tg000015l unplaced-scaffold na na JAHEOZ020000009.1 <> na Primary Assembly 82288247 na HG01109#2#h2tg000016l unplaced-scaffold na na JAHEOZ020000010.1 <> na Primary Assembly 7473503 na HG01109#2#h2tg000017l unplaced-scaffold na na JAHEOZ020000011.1 <> na Primary Assembly 105491724 na HG01109#2#h2tg000023l unplaced-scaffold na na JAHEOZ020000014.1 <> na Primary Assembly 29420543 na HG01109#2#h2tg000025l unplaced-scaffold na na JAHEOZ020000015.1 <> na Primary Assembly 30666487 na HG01109#2#h2tg000027l unplaced-scaffold na na JAHEOZ020000016.1 <> na Primary Assembly 44329130 na HG01109#2#h2tg000029l unplaced-scaffold na na JAHEOZ020000017.1 <> na Primary Assembly 98822562 na HG01109#2#h2tg000030l unplaced-scaffold na na JAHEOZ020000018.1 <> na Primary Assembly 43337666 na HG01109#2#h2tg000032l unplaced-scaffold na na JAHEOZ020000019.1 <> na Primary Assembly 9198891 na HG01109#2#h2tg000034l unplaced-scaffold na na JAHEOZ020000020.1 <> na Primary Assembly 45569505 na HG01109#2#h2tg000036l unplaced-scaffold na na JAHEOZ020000021.1 <> na Primary Assembly 1401822 na HG01109#2#h2tg000037l unplaced-scaffold na na JAHEOZ020000022.1 <> na Primary Assembly 7823339 na HG01109#2#h2tg000040l unplaced-scaffold na na JAHEOZ020000023.1 <> na Primary Assembly 5452536 na HG01109#2#h2tg000041l unplaced-scaffold na na JAHEOZ020000024.1 <> na Primary Assembly 153279 na HG01109#2#h2tg000042l unplaced-scaffold na na JAHEOZ020000025.1 <> na Primary Assembly 179599 na HG01109#2#h2tg000043l unplaced-scaffold na na JAHEOZ020000026.1 <> na Primary Assembly 955679 na HG01109#2#h2tg000045l unplaced-scaffold na na JAHEOZ020000027.1 <> na Primary Assembly 1121923 na HG01109#2#h2tg000047l unplaced-scaffold na na JAHEOZ020000028.1 <> na Primary Assembly 167640 na HG01109#2#h2tg000049l unplaced-scaffold na na JAHEOZ020000029.1 <> na Primary Assembly 4255628 na HG01109#2#h2tg000053l unplaced-scaffold na na JAHEOZ020000030.1 <> na Primary Assembly 944940 na HG01109#2#h2tg000054l unplaced-scaffold na na JAHEOZ020000031.1 <> na Primary Assembly 2263162 na HG01109#2#h2tg000058l unplaced-scaffold na na JAHEOZ020000032.1 <> na Primary Assembly 620892 na HG01109#2#h2tg000061l unplaced-scaffold na na JAHEOZ020000033.1 <> na Primary Assembly 110475 na HG01109#2#h2tg000069l unplaced-scaffold na na JAHEOZ020000034.1 <> na Primary Assembly 200281 na HG01109#2#h2tg000071l unplaced-scaffold na na JAHEOZ020000035.1 <> na Primary Assembly 84200 na HG01109#2#h2tg000072l unplaced-scaffold na na JAHEOZ020000036.1 <> na Primary Assembly 78204 na HG01109#2#h2tg000074l unplaced-scaffold na na JAHEOZ020000037.1 <> na Primary Assembly 446460 na HG01109#2#h2tg000076l unplaced-scaffold na na JAHEOZ020000038.1 <> na Primary Assembly 56241 na HG01109#2#h2tg000077l unplaced-scaffold na na JAHEOZ020000039.1 <> na Primary Assembly 88830 na HG01109#2#h2tg000078l unplaced-scaffold na na JAHEOZ020000040.1 <> na Primary Assembly 53314 na HG01109#2#h2tg000079l unplaced-scaffold na na JAHEOZ020000041.1 <> na Primary Assembly 80381 na HG01109#2#h2tg000080l unplaced-scaffold na na JAHEOZ020000042.1 <> na Primary Assembly 211974 na HG01109#2#h2tg000081l unplaced-scaffold na na JAHEOZ020000043.1 <> na Primary Assembly 107202 na HG01109#2#h2tg000083l unplaced-scaffold na na JAHEOZ020000044.1 <> na Primary Assembly 147009 na HG01109#2#h2tg000085l unplaced-scaffold na na JAHEOZ020000045.1 <> na Primary Assembly 51209 na HG01109#2#h2tg000086l unplaced-scaffold na na JAHEOZ020000046.1 <> na Primary Assembly 58979 na HG01109#2#h2tg000087l unplaced-scaffold na na JAHEOZ020000047.1 <> na Primary Assembly 172113 na HG01109#2#h2tg000088l unplaced-scaffold na na JAHEOZ020000048.1 <> na Primary Assembly 407496 na HG01109#2#h2tg000102l unplaced-scaffold na na JAHEOZ020000049.1 <> na Primary Assembly 84572 na HG01109#2#h2tg000103l unplaced-scaffold na na JAHEOZ020000050.1 <> na Primary Assembly 145621 na HG01109#2#h2tg000105l unplaced-scaffold na na JAHEOZ020000051.1 <> na Primary Assembly 50271 na HG01109#2#h2tg000108l unplaced-scaffold na na JAHEOZ020000052.1 <> na Primary Assembly 119022 na HG01109#2#h2tg000117l unplaced-scaffold na na JAHEOZ020000053.1 <> na Primary Assembly 69967 na HG01109#2#h2tg000118l unplaced-scaffold na na JAHEOZ020000054.1 <> na Primary Assembly 236589 na HG01109#2#h2tg000122l unplaced-scaffold na na JAHEOZ020000055.1 <> na Primary Assembly 81232 na HG01109#2#h2tg000123l unplaced-scaffold na na JAHEOZ020000056.1 <> na Primary Assembly 94462 na HG01109#2#h2tg000125l unplaced-scaffold na na JAHEOZ020000057.1 <> na Primary Assembly 77106 na HG01109#2#h2tg000128l unplaced-scaffold na na JAHEOZ020000058.1 <> na Primary Assembly 73969 na HG01109#2#h2tg000129l unplaced-scaffold na na JAHEOZ020000059.1 <> na Primary Assembly 65301 na HG01109#2#h2tg000131l unplaced-scaffold na na JAHEOZ020000060.1 <> na Primary Assembly 100213 na HG01109#2#h2tg000132l unplaced-scaffold na na JAHEOZ020000061.1 <> na Primary Assembly 57737 na HG01109#2#h2tg000134l unplaced-scaffold na na JAHEOZ020000062.1 <> na Primary Assembly 83763 na HG01109#2#h2tg000143l unplaced-scaffold na na JAHEOZ020000063.1 <> na Primary Assembly 159014 na HG01109#2#h2tg000149l unplaced-scaffold na na JAHEOZ020000064.1 <> na Primary Assembly 62835 na HG01109#2#h2tg000160l unplaced-scaffold na na JAHEOZ020000065.1 <> na Primary Assembly 73599 na HG01109#2#h2tg000164l unplaced-scaffold na na JAHEOZ020000066.1 <> na Primary Assembly 57422 na HG01109#2#h2tg000012l unplaced-scaffold na na JAHEOZ020000071.1 <> na Primary Assembly 121629157 na HG01109#2#h2tg000014l unplaced-scaffold na na JAHEOZ020000072.1 <> na Primary Assembly 61723480 na HG01109#2#h2tg000018l unplaced-scaffold na na JAHEOZ020000073.1 <> na Primary Assembly 124648340 na HG01109#2#h2tg000024l unplaced-scaffold na na JAHEOZ020000076.1 <> na Primary Assembly 59787532 na HG01109#2#h2tg000026l unplaced-scaffold na na JAHEOZ020000077.1 <> na Primary Assembly 51502794 na HG01109#2#h2tg000028l unplaced-scaffold na na JAHEOZ020000078.1 <> na Primary Assembly 18696365 na HG01109#2#h2tg000031l unplaced-scaffold na na JAHEOZ020000079.1 <> na Primary Assembly 2346211 na HG01109#2#h2tg000033l unplaced-scaffold na na JAHEOZ020000080.1 <> na Primary Assembly 1008107 na HG01109#2#h2tg000035l unplaced-scaffold na na JAHEOZ020000081.1 <> na Primary Assembly 17798797 na HG01109#2#h2tg000038l unplaced-scaffold na na JAHEOZ020000082.1 <> na Primary Assembly 2853781 na HG01109#2#h2tg000039l unplaced-scaffold na na JAHEOZ020000083.1 <> na Primary Assembly 1455439 na HG01109#2#h2tg000044l unplaced-scaffold na na JAHEOZ020000084.1 <> na Primary Assembly 1482896 na HG01109#2#h2tg000046l unplaced-scaffold na na JAHEOZ020000085.1 <> na Primary Assembly 1359267 na HG01109#2#h2tg000048l unplaced-scaffold na na JAHEOZ020000086.1 <> na Primary Assembly 459282 na HG01109#2#h2tg000051l unplaced-scaffold na na JAHEOZ020000087.1 <> na Primary Assembly 347161 na HG01109#2#h2tg000056l unplaced-scaffold na na JAHEOZ020000088.1 <> na Primary Assembly 2945225 na HG01109#2#h2tg000057l unplaced-scaffold na na JAHEOZ020000089.1 <> na Primary Assembly 84597 na HG01109#2#h2tg000059l unplaced-scaffold na na JAHEOZ020000090.1 <> na Primary Assembly 2235577 na HG01109#2#h2tg000062l unplaced-scaffold na na JAHEOZ020000091.1 <> na Primary Assembly 155123 na HG01109#2#h2tg000064l unplaced-scaffold na na JAHEOZ020000092.1 <> na Primary Assembly 143602 na HG01109#2#h2tg000065l unplaced-scaffold na na JAHEOZ020000093.1 <> na Primary Assembly 58125 na HG01109#2#h2tg000068l unplaced-scaffold na na JAHEOZ020000094.1 <> na Primary Assembly 77122 na HG01109#2#h2tg000070l unplaced-scaffold na na JAHEOZ020000095.1 <> na Primary Assembly 265816 na HG01109#2#h2tg000075l unplaced-scaffold na na JAHEOZ020000096.1 <> na Primary Assembly 218867 na HG01109#2#h2tg000082l unplaced-scaffold na na JAHEOZ020000097.1 <> na Primary Assembly 234923 na HG01109#2#h2tg000084l unplaced-scaffold na na JAHEOZ020000098.1 <> na Primary Assembly 395917 na HG01109#2#h2tg000090l unplaced-scaffold na na JAHEOZ020000099.1 <> na Primary Assembly 378211 na HG01109#2#h2tg000096l unplaced-scaffold na na JAHEOZ020000100.1 <> na Primary Assembly 79555 na HG01109#2#h2tg000097l unplaced-scaffold na na JAHEOZ020000101.1 <> na Primary Assembly 434782 na HG01109#2#h2tg000099l unplaced-scaffold na na JAHEOZ020000102.1 <> na Primary Assembly 496420 na HG01109#2#h2tg000100l unplaced-scaffold na na JAHEOZ020000103.1 <> na Primary Assembly 150422 na HG01109#2#h2tg000101l unplaced-scaffold na na JAHEOZ020000104.1 <> na Primary Assembly 89222 na HG01109#2#h2tg000104l unplaced-scaffold na na JAHEOZ020000105.1 <> na Primary Assembly 102348 na HG01109#2#h2tg000110l unplaced-scaffold na na JAHEOZ020000106.1 <> na Primary Assembly 185870 na HG01109#2#h2tg000111l unplaced-scaffold na na JAHEOZ020000107.1 <> na Primary Assembly 94184 na HG01109#2#h2tg000112l unplaced-scaffold na na JAHEOZ020000108.1 <> na Primary Assembly 119225 na HG01109#2#h2tg000114l unplaced-scaffold na na JAHEOZ020000109.1 <> na Primary Assembly 146309 na HG01109#2#h2tg000115l unplaced-scaffold na na JAHEOZ020000110.1 <> na Primary Assembly 262784 na HG01109#2#h2tg000121l unplaced-scaffold na na JAHEOZ020000111.1 <> na Primary Assembly 50983 na HG01109#2#h2tg000130l unplaced-scaffold na na JAHEOZ020000112.1 <> na Primary Assembly 137033 na HG01109#2#h2tg000136l unplaced-scaffold na na JAHEOZ020000113.1 <> na Primary Assembly 95374 na HG01109#2#h2tg000137l unplaced-scaffold na na JAHEOZ020000114.1 <> na Primary Assembly 121515 na HG01109#2#h2tg000138l unplaced-scaffold na na JAHEOZ020000115.1 <> na Primary Assembly 52557 na HG01109#2#h2tg000145l unplaced-scaffold na na JAHEOZ020000116.1 <> na Primary Assembly 73676 na HG01109#2#h2tg000146l unplaced-scaffold na na JAHEOZ020000117.1 <> na Primary Assembly 66237 na HG01109#2#h2tg000153l unplaced-scaffold na na JAHEOZ020000118.1 <> na Primary Assembly 52432 na HG01109#2#h2tg000155l unplaced-scaffold na na JAHEOZ020000119.1 <> na Primary Assembly 107923 na HG01109#2#h2tg000157l unplaced-scaffold na na JAHEOZ020000120.1 <> na Primary Assembly 57496 na HG01109#2#atg000002l_rotated unlocalized-scaffold MT Mitochondrion JAHEOZ020000121.1 <> na non-nuclear 16567 na