# Assembly name: HG00438_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG00438 # Sex: female # Taxid: 9606 # BioSample: SAMN17861652 # BioProject: PRJNA726273 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAHBCA02 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 77x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_018471515.2 # Linked assembly: GCA_018472595.2 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018471565.2 Primary Assembly ## GCA_018471575.2 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG00438#2#h2tg000017l assembled-molecule 1 Chromosome CM089186.1 <> na Primary Assembly 247331540 na HG00438#2#h2tg000004l assembled-molecule 2 Chromosome CM089187.1 <> na Primary Assembly 242807507 na HG00438#2#h2tg000003l assembled-molecule 3 Chromosome CM089188.1 <> na Primary Assembly 200822259 na HG00438#2#h2tg000001l assembled-molecule 4 Chromosome CM089189.1 <> na Primary Assembly 193612530 na HG00438#2#h2tg000007l assembled-molecule 5 Chromosome CM089190.1 <> na Primary Assembly 182704358 na HG00438#2#h2tg000009l assembled-molecule 6 Chromosome CM089191.1 <> na Primary Assembly 172218104 na HG00438#2#h2tg000010l assembled-molecule 7 Chromosome CM089192.1 <> na Primary Assembly 161755390 na HG00438#2#h2tg000013l assembled-molecule 8 Chromosome CM089193.1 <> na Primary Assembly 146844925 na HG00438#2#h2tg000002l assembled-molecule 10 Chromosome CM089194.1 <> na Primary Assembly 136335305 na HG00438#2#h2tg000011l assembled-molecule 11 Chromosome CM089195.1 <> na Primary Assembly 135230561 na HG00438#2#h2tg000020l assembled-molecule 12 Chromosome CM089196.1 <> na Primary Assembly 134385830 na HG00438#2#h2tg000008l assembled-molecule 16 Chromosome CM089197.1 <> na Primary Assembly 90327988 na HG00438#2#h2tg000006l assembled-molecule 17 Chromosome CM089198.1 <> na Primary Assembly 83847225 na HG00438#2#h2tg000023l assembled-molecule 18 Chromosome CM089199.1 <> na Primary Assembly 79840629 na HG00438#2#h2tg000015l assembled-molecule 19 Chromosome CM089200.1 <> na Primary Assembly 61370089 na HG00438#2#h2tg000014l assembled-molecule 20 Chromosome CM089201.1 <> na Primary Assembly 68311558 na HG00438#2#h2tg000016l assembled-molecule 21 Chromosome CM089202.1 <> na Primary Assembly 43337056 na HG00438#2#h2tg000005l unplaced-scaffold na na JAHBCA020000004.1 <> na Primary Assembly 76448402 na HG00438#2#h2tg000012l unplaced-scaffold na na JAHBCA020000008.1 <> na Primary Assembly 60135339 na HG00438#2#h2tg000019l unplaced-scaffold na na JAHBCA020000011.1 <> na Primary Assembly 45861560 na HG00438#2#h2tg000022l unplaced-scaffold na na JAHBCA020000013.1 <> na Primary Assembly 104717675 na HG00438#2#h2tg000024l unplaced-scaffold na na JAHBCA020000015.1 <> na Primary Assembly 97203760 na HG00438#2#h2tg000026l unplaced-scaffold na na JAHBCA020000016.1 <> na Primary Assembly 146393 na HG00438#2#h2tg000027l unplaced-scaffold na na JAHBCA020000017.1 <> na Primary Assembly 1349163 na HG00438#2#h2tg000029l unplaced-scaffold na na JAHBCA020000018.1 <> na Primary Assembly 4308169 na HG00438#2#h2tg000033l unplaced-scaffold na na JAHBCA020000019.1 <> na Primary Assembly 67077 na HG00438#2#h2tg000034l unplaced-scaffold na na JAHBCA020000020.1 <> na Primary Assembly 703696 na HG00438#2#h2tg000037l unplaced-scaffold na na JAHBCA020000021.1 <> na Primary Assembly 89120 na HG00438#2#h2tg000038l unplaced-scaffold na na JAHBCA020000022.1 <> na Primary Assembly 55039 na HG00438#2#h2tg000042l unplaced-scaffold na na JAHBCA020000023.1 <> na Primary Assembly 177394 na HG00438#2#h2tg000044l unplaced-scaffold na na JAHBCA020000024.1 <> na Primary Assembly 192200 na HG00438#2#h2tg000045l unplaced-scaffold na na JAHBCA020000025.1 <> na Primary Assembly 338885 na HG00438#2#h2tg000046l unplaced-scaffold na na JAHBCA020000026.1 <> na Primary Assembly 199278 na HG00438#2#h2tg000047l unplaced-scaffold na na JAHBCA020000027.1 <> na Primary Assembly 67964 na HG00438#2#h2tg000048l unplaced-scaffold na na JAHBCA020000028.1 <> na Primary Assembly 114937 na HG00438#2#h2tg000049l unplaced-scaffold na na JAHBCA020000029.1 <> na Primary Assembly 742889 na HG00438#2#h2tg000051l unplaced-scaffold na na JAHBCA020000030.1 <> na Primary Assembly 83984 na HG00438#2#h2tg000055l unplaced-scaffold na na JAHBCA020000031.1 <> na Primary Assembly 84519 na HG00438#2#h2tg000057l unplaced-scaffold na na JAHBCA020000032.1 <> na Primary Assembly 74731 na HG00438#2#h2tg000063l unplaced-scaffold na na JAHBCA020000033.1 <> na Primary Assembly 85269 na HG00438#2#h2tg000065l unplaced-scaffold na na JAHBCA020000034.1 <> na Primary Assembly 98876 na HG00438#2#h2tg000066l unplaced-scaffold na na JAHBCA020000035.1 <> na Primary Assembly 152719 na HG00438#2#h2tg000068l unplaced-scaffold na na JAHBCA020000036.1 <> na Primary Assembly 103299 na HG00438#2#h2tg000069l unplaced-scaffold na na JAHBCA020000037.1 <> na Primary Assembly 128709 na HG00438#2#h2tg000071l unplaced-scaffold na na JAHBCA020000038.1 <> na Primary Assembly 236285 na HG00438#2#h2tg000075l unplaced-scaffold na na JAHBCA020000039.1 <> na Primary Assembly 219943 na HG00438#2#h2tg000076l unplaced-scaffold na na JAHBCA020000040.1 <> na Primary Assembly 57317 na HG00438#2#h2tg000080l unplaced-scaffold na na JAHBCA020000041.1 <> na Primary Assembly 63134 na HG00438#2#h2tg000018l unplaced-scaffold na na JAHBCA020000049.1 <> na Primary Assembly 90612704 na HG00438#2#h2tg000021l unplaced-scaffold na na JAHBCA020000050.1 <> na Primary Assembly 53873734 na HG00438#2#h2tg000025l unplaced-scaffold na na JAHBCA020000051.1 <> na Primary Assembly 93061199 na HG00438#2#h2tg000028l unplaced-scaffold na na JAHBCA020000052.1 <> na Primary Assembly 1326604 na HG00438#2#h2tg000030l unplaced-scaffold na na JAHBCA020000053.1 <> na Primary Assembly 4716812 na HG00438#2#h2tg000032l unplaced-scaffold na na JAHBCA020000054.1 <> na Primary Assembly 2986724 na HG00438#2#h2tg000035l unplaced-scaffold na na JAHBCA020000055.1 <> na Primary Assembly 4065458 na HG00438#2#h2tg000036l unplaced-scaffold na na JAHBCA020000056.1 <> na Primary Assembly 1553377 na HG00438#2#h2tg000039l unplaced-scaffold na na JAHBCA020000057.1 <> na Primary Assembly 68400 na HG00438#2#h2tg000040l unplaced-scaffold na na JAHBCA020000058.1 <> na Primary Assembly 212462 na HG00438#2#h2tg000041l unplaced-scaffold na na JAHBCA020000059.1 <> na Primary Assembly 141971 na HG00438#2#h2tg000050l unplaced-scaffold na na JAHBCA020000060.1 <> na Primary Assembly 136273 na HG00438#2#h2tg000052l unplaced-scaffold na na JAHBCA020000061.1 <> na Primary Assembly 65871 na HG00438#2#h2tg000053l unplaced-scaffold na na JAHBCA020000062.1 <> na Primary Assembly 282039 na HG00438#2#h2tg000054l unplaced-scaffold na na JAHBCA020000063.1 <> na Primary Assembly 78367 na HG00438#2#h2tg000056l unplaced-scaffold na na JAHBCA020000064.1 <> na Primary Assembly 135791 na HG00438#2#h2tg000058l unplaced-scaffold na na JAHBCA020000065.1 <> na Primary Assembly 279268 na HG00438#2#h2tg000059l unplaced-scaffold na na JAHBCA020000066.1 <> na Primary Assembly 75526 na HG00438#2#h2tg000061l unplaced-scaffold na na JAHBCA020000067.1 <> na Primary Assembly 65475 na HG00438#2#h2tg000062l unplaced-scaffold na na JAHBCA020000068.1 <> na Primary Assembly 127315 na HG00438#2#h2tg000064l unplaced-scaffold na na JAHBCA020000069.1 <> na Primary Assembly 51546 na HG00438#2#h2tg000067l unplaced-scaffold na na JAHBCA020000070.1 <> na Primary Assembly 74225 na HG00438#2#h2tg000070l unplaced-scaffold na na JAHBCA020000071.1 <> na Primary Assembly 165478 na HG00438#2#h2tg000072l unplaced-scaffold na na JAHBCA020000072.1 <> na Primary Assembly 70256 na HG00438#2#h2tg000073l unplaced-scaffold na na JAHBCA020000073.1 <> na Primary Assembly 65209 na HG00438#2#h2tg000074l unplaced-scaffold na na JAHBCA020000074.1 <> na Primary Assembly 52510 na HG00438#2#h2tg000077l unplaced-scaffold na na JAHBCA020000075.1 <> na Primary Assembly 113302 na HG00438#2#atg000003l_rc_rotated unlocalized-scaffold MT Mitochondrion JAHBCA020000076.1 <> na non-nuclear 16569 na