# Assembly name: HG01106_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG01106 # Sex: male # Taxid: 9606 # BioSample: SAMN17861658 # BioProject: PRJNA726229 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAHAMB02 # Assembly method: Hifiasm v. 0.19.7 # Expected final version: no # Genome coverage: 56x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_018471345.2 # Linked assembly: GCA_018471075.2 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018471495.2 Primary Assembly ## GCA_018471505.2 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG01106#2#h2tg000017l assembled-molecule 1 Chromosome CM087963.1 <> na Primary Assembly 247128767 na HG01106#2#h2tg000001l assembled-molecule 2 Chromosome CM087964.1 <> na Primary Assembly 242444077 na HG01106#2#h2tg000013l assembled-molecule 6 Chromosome CM087965.1 <> na Primary Assembly 171143327 na HG01106#2#h2tg000008l assembled-molecule 8 Chromosome CM087966.1 <> na Primary Assembly 144961521 na HG01106#2#h2tg000020l assembled-molecule 9 Chromosome CM087967.1 <> na Primary Assembly 139518261 na HG01106#2#h2tg000006l assembled-molecule 10 Chromosome CM087968.1 <> na Primary Assembly 135354631 na HG01106#2#h2tg000009l assembled-molecule 11 Chromosome CM087969.1 <> na Primary Assembly 134044840 na HG01106#2#h2tg000019l assembled-molecule 12 Chromosome CM087970.1 <> na Primary Assembly 133827105 na HG01106#2#h2tg000012l assembled-molecule 16 Chromosome CM087971.1 <> na Primary Assembly 91160039 na HG01106#2#h2tg000004l assembled-molecule 18 Chromosome CM087972.1 <> na Primary Assembly 80274697 na HG01106#2#h2tg000011l assembled-molecule 20 Chromosome CM087973.1 <> na Primary Assembly 66396633 na HG01106#2#h2tg000002l unplaced-scaffold na na JAHAMB020000001.1 <> na Primary Assembly 182989686 na HG01106#2#h2tg000003l unplaced-scaffold na na JAHAMB020000002.1 <> na Primary Assembly 160908074 na HG01106#2#h2tg000007l unplaced-scaffold na na JAHAMB020000005.1 <> na Primary Assembly 96251199 na HG01106#2#h2tg000010l unplaced-scaffold na na JAHAMB020000007.1 <> na Primary Assembly 33909148 na HG01106#2#h2tg000015l unplaced-scaffold na na JAHAMB020000010.1 <> na Primary Assembly 98385782 na HG01106#2#h2tg000016l unplaced-scaffold na na JAHAMB020000011.1 <> na Primary Assembly 139874722 na HG01106#2#h2tg000018l unplaced-scaffold na na JAHAMB020000013.1 <> na Primary Assembly 90812451 na HG01106#2#h2tg000021l unplaced-scaffold na na JAHAMB020000015.1 <> na Primary Assembly 109892213 na HG01106#2#h2tg000022l unplaced-scaffold na na JAHAMB020000016.1 <> na Primary Assembly 83814851 na HG01106#2#h2tg000023l unplaced-scaffold na na JAHAMB020000017.1 <> na Primary Assembly 26594685 na HG01106#2#h2tg000024l unplaced-scaffold na na JAHAMB020000018.1 <> na Primary Assembly 35415408 na HG01106#2#h2tg000026l unplaced-scaffold na na JAHAMB020000019.1 <> na Primary Assembly 51239493 na HG01106#2#h2tg000027l unplaced-scaffold na na JAHAMB020000020.1 <> na Primary Assembly 46729775 na HG01106#2#h2tg000028l unplaced-scaffold na na JAHAMB020000021.1 <> na Primary Assembly 15023976 na HG01106#2#h2tg000029l unplaced-scaffold na na JAHAMB020000022.1 <> na Primary Assembly 1746465 na HG01106#2#h2tg000030l unplaced-scaffold na na JAHAMB020000023.1 <> na Primary Assembly 1265155 na HG01106#2#h2tg000031l unplaced-scaffold na na JAHAMB020000024.1 <> na Primary Assembly 4936295 na HG01106#2#h2tg000032l unplaced-scaffold na na JAHAMB020000025.1 <> na Primary Assembly 447594 na HG01106#2#h2tg000033l unplaced-scaffold na na JAHAMB020000026.1 <> na Primary Assembly 1124228 na HG01106#2#h2tg000037l unplaced-scaffold na na JAHAMB020000027.1 <> na Primary Assembly 517079 na HG01106#2#h2tg000041l unplaced-scaffold na na JAHAMB020000028.1 <> na Primary Assembly 921809 na HG01106#2#h2tg000043l unplaced-scaffold na na JAHAMB020000029.1 <> na Primary Assembly 86738 na HG01106#2#h2tg000044l unplaced-scaffold na na JAHAMB020000030.1 <> na Primary Assembly 718542 na HG01106#2#h2tg000047l unplaced-scaffold na na JAHAMB020000031.1 <> na Primary Assembly 76305 na HG01106#2#h2tg000048l unplaced-scaffold na na JAHAMB020000032.1 <> na Primary Assembly 247400 na HG01106#2#h2tg000049l unplaced-scaffold na na JAHAMB020000033.1 <> na Primary Assembly 1363136 na HG01106#2#h2tg000050l unplaced-scaffold na na JAHAMB020000034.1 <> na Primary Assembly 171830 na HG01106#2#h2tg000056l unplaced-scaffold na na JAHAMB020000035.1 <> na Primary Assembly 197044 na HG01106#2#h2tg000057l unplaced-scaffold na na JAHAMB020000036.1 <> na Primary Assembly 125063 na HG01106#2#h2tg000064l unplaced-scaffold na na JAHAMB020000037.1 <> na Primary Assembly 178680 na HG01106#2#h2tg000065l unplaced-scaffold na na JAHAMB020000038.1 <> na Primary Assembly 169569 na HG01106#2#h2tg000067l unplaced-scaffold na na JAHAMB020000039.1 <> na Primary Assembly 75787 na HG01106#2#h2tg000068l unplaced-scaffold na na JAHAMB020000040.1 <> na Primary Assembly 326916 na HG01106#2#h2tg000069l unplaced-scaffold na na JAHAMB020000041.1 <> na Primary Assembly 119079 na HG01106#2#h2tg000072l unplaced-scaffold na na JAHAMB020000042.1 <> na Primary Assembly 106206 na HG01106#2#h2tg000074l unplaced-scaffold na na JAHAMB020000043.1 <> na Primary Assembly 94023 na HG01106#2#h2tg000076l unplaced-scaffold na na JAHAMB020000044.1 <> na Primary Assembly 70736 na HG01106#2#h2tg000077l unplaced-scaffold na na JAHAMB020000045.1 <> na Primary Assembly 109789 na HG01106#2#h2tg000078l unplaced-scaffold na na JAHAMB020000046.1 <> na Primary Assembly 76590 na HG01106#2#h2tg000084l unplaced-scaffold na na JAHAMB020000047.1 <> na Primary Assembly 109810 na HG01106#2#h2tg000085l unplaced-scaffold na na JAHAMB020000048.1 <> na Primary Assembly 60152 na HG01106#2#h2tg000088l unplaced-scaffold na na JAHAMB020000049.1 <> na Primary Assembly 93333 na HG01106#2#h2tg000092l unplaced-scaffold na na JAHAMB020000050.1 <> na Primary Assembly 96408 na HG01106#2#h2tg000099l unplaced-scaffold na na JAHAMB020000051.1 <> na Primary Assembly 62119 na HG01106#2#h2tg000103l unplaced-scaffold na na JAHAMB020000052.1 <> na Primary Assembly 57146 na HG01106#2#h2tg000005l unplaced-scaffold na na JAHAMB020000054.1 <> na Primary Assembly 87423544 na HG01106#2#h2tg000014l unplaced-scaffold na na JAHAMB020000057.1 <> na Primary Assembly 52038960 na HG01106#2#h2tg000025l unplaced-scaffold na na JAHAMB020000059.1 <> na Primary Assembly 93671495 na HG01106#2#h2tg000034l unplaced-scaffold na na JAHAMB020000060.1 <> na Primary Assembly 1569608 na HG01106#2#h2tg000035l unplaced-scaffold na na JAHAMB020000061.1 <> na Primary Assembly 2989672 na HG01106#2#h2tg000036l unplaced-scaffold na na JAHAMB020000062.1 <> na Primary Assembly 5319864 na HG01106#2#h2tg000038l unplaced-scaffold na na JAHAMB020000063.1 <> na Primary Assembly 261300 na HG01106#2#h2tg000039l unplaced-scaffold na na JAHAMB020000064.1 <> na Primary Assembly 1541669 na HG01106#2#h2tg000040l unplaced-scaffold na na JAHAMB020000065.1 <> na Primary Assembly 74877 na HG01106#2#h2tg000042l unplaced-scaffold na na JAHAMB020000066.1 <> na Primary Assembly 1307727 na HG01106#2#h2tg000045l unplaced-scaffold na na JAHAMB020000067.1 <> na Primary Assembly 1451684 na HG01106#2#h2tg000046l unplaced-scaffold na na JAHAMB020000068.1 <> na Primary Assembly 1130192 na HG01106#2#h2tg000052l unplaced-scaffold na na JAHAMB020000069.1 <> na Primary Assembly 1909554 na HG01106#2#h2tg000053l unplaced-scaffold na na JAHAMB020000070.1 <> na Primary Assembly 331183 na HG01106#2#h2tg000055l unplaced-scaffold na na JAHAMB020000071.1 <> na Primary Assembly 678138 na HG01106#2#h2tg000058l unplaced-scaffold na na JAHAMB020000072.1 <> na Primary Assembly 52346 na HG01106#2#h2tg000061l unplaced-scaffold na na JAHAMB020000073.1 <> na Primary Assembly 73616 na HG01106#2#h2tg000063l unplaced-scaffold na na JAHAMB020000074.1 <> na Primary Assembly 52154 na HG01106#2#h2tg000066l unplaced-scaffold na na JAHAMB020000075.1 <> na Primary Assembly 57648 na HG01106#2#h2tg000070l unplaced-scaffold na na JAHAMB020000076.1 <> na Primary Assembly 158920 na HG01106#2#h2tg000073l unplaced-scaffold na na JAHAMB020000077.1 <> na Primary Assembly 67344 na HG01106#2#h2tg000079l unplaced-scaffold na na JAHAMB020000078.1 <> na Primary Assembly 271973 na HG01106#2#h2tg000080l unplaced-scaffold na na JAHAMB020000079.1 <> na Primary Assembly 77698 na HG01106#2#h2tg000081l unplaced-scaffold na na JAHAMB020000080.1 <> na Primary Assembly 74593 na HG01106#2#h2tg000082l unplaced-scaffold na na JAHAMB020000081.1 <> na Primary Assembly 103945 na HG01106#2#h2tg000086l unplaced-scaffold na na JAHAMB020000082.1 <> na Primary Assembly 101157 na HG01106#2#h2tg000097l unplaced-scaffold na na JAHAMB020000083.1 <> na Primary Assembly 51913 na HG01106#2#ptg000001l_rc_rotated unlocalized-scaffold MT Mitochondrion JAHAMB020000084.1 <> na non-nuclear 16569 na