# Assembly name: HG03516_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG03516 # Sex: female # Taxid: 9606 # BioSample: SAMN17861241 # BioProject: PRJNA725603 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAGYYT02 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 92x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_018469415.2 # Linked assembly: GCA_018469425.2 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018469495.2 Primary Assembly ## GCA_042038475.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG03516#2#h2tg000001l assembled-molecule 1 Chromosome CM089230.1 <> na Primary Assembly 251426338 na HG03516#2#h2tg000006l assembled-molecule 5 Chromosome CM089231.1 <> na Primary Assembly 183080928 na HG03516#2#h2tg000016l assembled-molecule 7 Chromosome CM089232.1 <> na Primary Assembly 160674976 na HG03516#2#h2tg000026l assembled-molecule 8 Chromosome CM089233.1 <> na Primary Assembly 146859667 na HG03516#2#h2tg000010l assembled-molecule 9 Chromosome CM089234.1 <> na Primary Assembly 132502382 na HG03516#2#h2tg000021l assembled-molecule 11 Chromosome CM089235.1 <> na Primary Assembly 135238904 na HG03516#2#h2tg000004l assembled-molecule 12 Chromosome CM089236.1 <> na Primary Assembly 134294824 na HG03516#2#h2tg000027l assembled-molecule 14 Chromosome CM089237.1 <> na Primary Assembly 103294039 na HG03516#2#h2tg000025l assembled-molecule 15 Chromosome CM089238.1 <> na Primary Assembly 97925850 na HG03516#2#h2tg000020l assembled-molecule 16 Chromosome CM089239.1 <> na Primary Assembly 88754436 na HG03516#2#h2tg000014l assembled-molecule 17 Chromosome CM089240.1 <> na Primary Assembly 83663000 na HG03516#2#h2tg000005l assembled-molecule 19 Chromosome CM089241.1 <> na Primary Assembly 61275517 na HG03516#2#h2tg000019l assembled-molecule 20 Chromosome CM089242.1 <> na Primary Assembly 67251692 na HG03516#2#h2tg000015l assembled-molecule X Chromosome CM089243.1 <> na Primary Assembly 153175449 na HG03516#2#h2tg000002l unplaced-scaffold na na JAGYYT020000001.1 <> na Primary Assembly 104907588 na HG03516#2#h2tg000009l unplaced-scaffold na na JAGYYT020000003.1 <> na Primary Assembly 190991205 na HG03516#2#h2tg000012l unplaced-scaffold na na JAGYYT020000005.1 <> na Primary Assembly 51937516 na HG03516#2#h2tg000013l unplaced-scaffold na na JAGYYT020000006.1 <> na Primary Assembly 92393258 na HG03516#2#h2tg000018l unplaced-scaffold na na JAGYYT020000010.1 <> na Primary Assembly 44449130 na HG03516#2#h2tg000028l unplaced-scaffold na na JAGYYT020000013.1 <> na Primary Assembly 4090917 na HG03516#2#h2tg000030l unplaced-scaffold na na JAGYYT020000014.1 <> na Primary Assembly 200893 na HG03516#2#h2tg000032l unplaced-scaffold na na JAGYYT020000015.1 <> na Primary Assembly 55728 na HG03516#2#h2tg000038l unplaced-scaffold na na JAGYYT020000016.1 <> na Primary Assembly 73913 na HG03516#2#h2tg000039l unplaced-scaffold na na JAGYYT020000017.1 <> na Primary Assembly 73826 na HG03516#2#h2tg000040l unplaced-scaffold na na JAGYYT020000018.1 <> na Primary Assembly 57524 na HG03516#2#h2tg000047l unplaced-scaffold na na JAGYYT020000019.1 <> na Primary Assembly 205080 na HG03516#2#h2tg000055l unplaced-scaffold na na JAGYYT020000020.1 <> na Primary Assembly 114555 na HG03516#2#h2tg000060l unplaced-scaffold na na JAGYYT020000021.1 <> na Primary Assembly 144914 na HG03516#2#h2tg000064l unplaced-scaffold na na JAGYYT020000022.1 <> na Primary Assembly 434970 na HG03516#2#h2tg000066l unplaced-scaffold na na JAGYYT020000023.1 <> na Primary Assembly 115528 na HG03516#2#h2tg000068l unplaced-scaffold na na JAGYYT020000024.1 <> na Primary Assembly 235517 na HG03516#2#h2tg000074l unplaced-scaffold na na JAGYYT020000025.1 <> na Primary Assembly 89855 na HG03516#2#h2tg000075l unplaced-scaffold na na JAGYYT020000026.1 <> na Primary Assembly 67303 na HG03516#2#h2tg000077l unplaced-scaffold na na JAGYYT020000027.1 <> na Primary Assembly 51645 na HG03516#2#h2tg000083l unplaced-scaffold na na JAGYYT020000028.1 <> na Primary Assembly 87775 na HG03516#2#h2tg000003l unplaced-scaffold na na JAGYYT020000030.1 <> na Primary Assembly 59758512 na HG03516#2#h2tg000007l unplaced-scaffold na na JAGYYT020000033.1 <> na Primary Assembly 36682654 na HG03516#2#h2tg000008l unplaced-scaffold na na JAGYYT020000034.1 <> na Primary Assembly 191279967 na HG03516#2#h2tg000011l unplaced-scaffold na na JAGYYT020000035.1 <> na Primary Assembly 112540290 na HG03516#2#h2tg000017l unplaced-scaffold na na JAGYYT020000036.1 <> na Primary Assembly 68229396 na HG03516#2#h2tg000022l unplaced-scaffold na na JAGYYT020000039.1 <> na Primary Assembly 111551517 na HG03516#2#h2tg000023l unplaced-scaffold na na JAGYYT020000040.1 <> na Primary Assembly 21855415 na HG03516#2#h2tg000024l unplaced-scaffold na na JAGYYT020000041.1 <> na Primary Assembly 107241844 na HG03516#2#h2tg000031l unplaced-scaffold na na JAGYYT020000044.1 <> na Primary Assembly 11833375 na HG03516#2#h2tg000033l unplaced-scaffold na na JAGYYT020000045.1 <> na Primary Assembly 2473906 na HG03516#2#h2tg000034l unplaced-scaffold na na JAGYYT020000046.1 <> na Primary Assembly 465756 na HG03516#2#h2tg000035l unplaced-scaffold na na JAGYYT020000047.1 <> na Primary Assembly 3794593 na HG03516#2#h2tg000036l unplaced-scaffold na na JAGYYT020000048.1 <> na Primary Assembly 3267851 na HG03516#2#h2tg000037l unplaced-scaffold na na JAGYYT020000049.1 <> na Primary Assembly 332427 na HG03516#2#h2tg000042l unplaced-scaffold na na JAGYYT020000050.1 <> na Primary Assembly 216093 na HG03516#2#h2tg000043l unplaced-scaffold na na JAGYYT020000051.1 <> na Primary Assembly 221032 na HG03516#2#h2tg000045l unplaced-scaffold na na JAGYYT020000052.1 <> na Primary Assembly 190560 na HG03516#2#h2tg000046l unplaced-scaffold na na JAGYYT020000053.1 <> na Primary Assembly 101612 na HG03516#2#h2tg000048l unplaced-scaffold na na JAGYYT020000054.1 <> na Primary Assembly 943192 na HG03516#2#h2tg000049l unplaced-scaffold na na JAGYYT020000055.1 <> na Primary Assembly 62960 na HG03516#2#h2tg000051l unplaced-scaffold na na JAGYYT020000056.1 <> na Primary Assembly 398094 na HG03516#2#h2tg000052l unplaced-scaffold na na JAGYYT020000057.1 <> na Primary Assembly 73774 na HG03516#2#h2tg000053l unplaced-scaffold na na JAGYYT020000058.1 <> na Primary Assembly 66771 na HG03516#2#h2tg000056l unplaced-scaffold na na JAGYYT020000059.1 <> na Primary Assembly 90990 na HG03516#2#h2tg000058l unplaced-scaffold na na JAGYYT020000060.1 <> na Primary Assembly 393293 na HG03516#2#h2tg000059l unplaced-scaffold na na JAGYYT020000061.1 <> na Primary Assembly 206639 na HG03516#2#h2tg000061l unplaced-scaffold na na JAGYYT020000062.1 <> na Primary Assembly 76321 na HG03516#2#h2tg000065l unplaced-scaffold na na JAGYYT020000063.1 <> na Primary Assembly 50602 na HG03516#2#h2tg000069l unplaced-scaffold na na JAGYYT020000064.1 <> na Primary Assembly 101344 na HG03516#2#h2tg000070l unplaced-scaffold na na JAGYYT020000065.1 <> na Primary Assembly 132793 na HG03516#2#h2tg000071l unplaced-scaffold na na JAGYYT020000066.1 <> na Primary Assembly 52932 na HG03516#2#h2tg000072l unplaced-scaffold na na JAGYYT020000067.1 <> na Primary Assembly 75051 na HG03516#2#h2tg000073l unplaced-scaffold na na JAGYYT020000068.1 <> na Primary Assembly 142200 na HG03516#2#h2tg000076l unplaced-scaffold na na JAGYYT020000069.1 <> na Primary Assembly 89227 na HG03516#2#h2tg000078l unplaced-scaffold na na JAGYYT020000070.1 <> na Primary Assembly 75374 na HG03516#2#h2tg000085l unplaced-scaffold na na JAGYYT020000071.1 <> na Primary Assembly 56996 na HG03516#2#atg000001l_rotated unlocalized-scaffold MT Mitochondrion JAGYYT020000072.1 <> na non-nuclear 16571 na