The repeat files provided for this assembly were generated using RepeatMasker. Smit, AFA, Hubley, R & Green, P., RepeatMasker version 4.1.4 1996-2010 . VERSION: RepeatMasker version 4.1.4 Search Engine: NCBI/RMBLAST [ 2.13.0+ ] ##################################### # LIBPATH: # /hive/data/staging/data/RepeatMasker221107/Libraries # /cluster/home/hiram/.RepeatMaskerCache # /hive/data/genomes/asmHubs/genbankBuild/GCA/018/150/745/GCA_018150745.1_ASM1815074v1/trackData/repeatMasker/run.cluster/RM_14797.FriMay120014242023 ##################################### Using Master RepeatMasker Database: /hive/data/staging/data/RepeatMasker221107/Libraries/RepeatMaskerLib.h5 Title : Dfam Version : 3.6 Date : 2022-04-12 Families : 733,031 Species/Taxa Search: bocainensis subgroup [NCBI Taxonomy ID: 32366] Lineage: root;cellular organisms;Eukaryota;Opisthokonta;Metazoa; Eumetazoa;Bilateria;Protostomia;Ecdysozoa;Panarthropoda; Arthropoda;Mandibulata;Pancrustacea;Hexapoda;Insecta; Dicondylia;Pterygota ;Neoptera;Endopterygota; Diptera;Brachycera;Muscomorpha;Eremoneura;Cyclorrhapha; Schizophora;Acalyptratae;Ephydroidea;Drosophilidae; Drosophilinae;Drosophilini;Drosophila 196 families in ancestor taxa; 0 lineage-specific families RepeatMasker version 4.1.4 # RMRBMeta.embl library version: CC RELEASE 20181026; * # RepeatMasker engine: -engine rmblast -pa 1 # RepeatMasker library options: -species 'bocainensis subgroup' PARAMETERS: /hive/data/staging/data/RepeatMasker221107/RepeatMasker -engine rmblast -pa 1 -align -species 'bocainensis subgroup'