# Assembly name: UKP13.v0 # Organism name: Cryptosporidium parvum (apicomplexans) # Infraspecific name: strain=UKP13 # Taxid: 5807 # BioSample: SAMN08383021 # BioProject: PRJNA315505 # Submitter: Public Health Wales (Microbiology) # Date: 2019-03-11 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: PVQD01 # Assembly method: SPAdes v. 3.5.0 # Expected final version: no # Genome coverage: 91.0x # Sequencing technology: Illumina HiSeq # Excluded from RefSeq: genome length too small # GenBank assembly accession: GCA_004337945.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_004337965.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scf_1 unplaced-scaffold na na PVQD01000001.1 <> na Primary Assembly 1358970 na scf_10 unplaced-scaffold na na PVQD01000010.1 <> na Primary Assembly 162446 na scf_100 unplaced-scaffold na na PVQD01000099.1 <> na Primary Assembly 810 na scf_101 unplaced-scaffold na na PVQD01000100.1 <> na Primary Assembly 834 na scf_102 unplaced-scaffold na na PVQD01000101.1 <> na Primary Assembly 432 na scf_103 unplaced-scaffold na na PVQD01000102.1 <> na Primary Assembly 667 na scf_104 unplaced-scaffold na na PVQD01000103.1 <> na Primary Assembly 905 na scf_105 unplaced-scaffold na na PVQD01000104.1 <> na Primary Assembly 673 na scf_106 unplaced-scaffold na na PVQD01000105.1 <> na Primary Assembly 1003 na scf_107 unplaced-scaffold na na PVQD01000106.1 <> na Primary Assembly 1218 na scf_108 unplaced-scaffold na na PVQD01000107.1 <> na Primary Assembly 1496 na scf_11 unplaced-scaffold na na PVQD01000011.1 <> na Primary Assembly 177630 na scf_12 unplaced-scaffold na na PVQD01000012.1 <> na Primary Assembly 120496 na scf_13 unplaced-scaffold na na PVQD01000013.1 <> na Primary Assembly 89835 na scf_14 unplaced-scaffold na na PVQD01000014.1 <> na Primary Assembly 62130 na scf_15 unplaced-scaffold na na PVQD01000015.1 <> na Primary Assembly 79478 na scf_16 unplaced-scaffold na na PVQD01000016.1 <> na Primary Assembly 9695 na scf_17 unplaced-scaffold na na PVQD01000017.1 <> na Primary Assembly 5318 na scf_18 unplaced-scaffold na na PVQD01000018.1 <> na Primary Assembly 6549 na scf_19 unplaced-scaffold na na PVQD01000019.1 <> na Primary Assembly 2530 na scf_2 unplaced-scaffold na na PVQD01000002.1 <> na Primary Assembly 1203378 na scf_20 unplaced-scaffold na na PVQD01000020.1 <> na Primary Assembly 500 na scf_21 unplaced-scaffold na na PVQD01000021.1 <> na Primary Assembly 501 na scf_22 unplaced-scaffold na na PVQD01000022.1 <> na Primary Assembly 409 na scf_23 unplaced-scaffold na na PVQD01000023.1 <> na Primary Assembly 503 na scf_24 unplaced-scaffold na na PVQD01000024.1 <> na Primary Assembly 503 na scf_25 unplaced-scaffold na na PVQD01000025.1 <> na Primary Assembly 384 na scf_26 unplaced-scaffold na na PVQD01000026.1 <> na Primary Assembly 507 na scf_27 unplaced-scaffold na na PVQD01000027.1 <> na Primary Assembly 379 na scf_28 unplaced-scaffold na na PVQD01000028.1 <> na Primary Assembly 289 na scf_29 unplaced-scaffold na na PVQD01000029.1 <> na Primary Assembly 510 na scf_3 unplaced-scaffold na na PVQD01000003.1 <> na Primary Assembly 1146512 na scf_30 unplaced-scaffold na na PVQD01000030.1 <> na Primary Assembly 493 na scf_31 unplaced-scaffold na na PVQD01000031.1 <> na Primary Assembly 488 na scf_32 unplaced-scaffold na na PVQD01000032.1 <> na Primary Assembly 317 na scf_33 unplaced-scaffold na na PVQD01000033.1 <> na Primary Assembly 435 na scf_34 unplaced-scaffold na na PVQD01000034.1 <> na Primary Assembly 517 na scf_35 unplaced-scaffold na na PVQD01000035.1 <> na Primary Assembly 423 na scf_36 unplaced-scaffold na na PVQD01000036.1 <> na Primary Assembly 451 na scf_37 unplaced-scaffold na na PVQD01000037.1 <> na Primary Assembly 515 na scf_38 unplaced-scaffold na na PVQD01000038.1 <> na Primary Assembly 387 na scf_39 unplaced-scaffold na na PVQD01000039.1 <> na Primary Assembly 492 na scf_4 unplaced-scaffold na na PVQD01000004.1 <> na Primary Assembly 1025362 na scf_40 unplaced-scaffold na na PVQD01000040.1 <> na Primary Assembly 404 na scf_41 unplaced-scaffold na na PVQD01000041.1 <> na Primary Assembly 335 na scf_42 unplaced-scaffold na na PVQD01000042.1 <> na Primary Assembly 535 na scf_43 unplaced-scaffold na na PVQD01000043.1 <> na Primary Assembly 536 na scf_44 unplaced-scaffold na na PVQD01000044.1 <> na Primary Assembly 450 na scf_45 unplaced-scaffold na na PVQD01000045.1 <> na Primary Assembly 330 na scf_46 unplaced-scaffold na na PVQD01000046.1 <> na Primary Assembly 341 na scf_47 unplaced-scaffold na na PVQD01000047.1 <> na Primary Assembly 341 na scf_48 unplaced-scaffold na na PVQD01000048.1 <> na Primary Assembly 528 na scf_49 unplaced-scaffold na na PVQD01000049.1 <> na Primary Assembly 554 na scf_5 unplaced-scaffold na na PVQD01000005.1 <> na Primary Assembly 905142 na scf_50 unplaced-scaffold na na PVQD01000050.1 <> na Primary Assembly 350 na scf_51 unplaced-scaffold na na PVQD01000051.1 <> na Primary Assembly 375 na scf_52 unplaced-scaffold na na PVQD01000052.1 <> na Primary Assembly 1013 na scf_53 unplaced-scaffold na na PVQD01000053.1 <> na Primary Assembly 509 na scf_54 unplaced-scaffold na na PVQD01000054.1 <> na Primary Assembly 562 na scf_55 unplaced-scaffold na na PVQD01000055.1 <> na Primary Assembly 562 na scf_56 unplaced-scaffold na na PVQD01000056.1 <> na Primary Assembly 496 na scf_57 unplaced-scaffold na na PVQD01000057.1 <> na Primary Assembly 558 na scf_58 unplaced-scaffold na na PVQD01000058.1 <> na Primary Assembly 569 na scf_59 unplaced-scaffold na na PVQD01000059.1 <> na Primary Assembly 572 na scf_6 unplaced-scaffold na na PVQD01000006.1 <> na Primary Assembly 886239 na scf_60 unplaced-scaffold na na PVQD01000060.1 <> na Primary Assembly 576 na scf_61 unplaced-scaffold na na PVQD01000061.1 <> na Primary Assembly 579 na scf_62 unplaced-scaffold na na PVQD01000062.1 <> na Primary Assembly 580 na scf_63 unplaced-scaffold na na PVQD01000063.1 <> na Primary Assembly 437 na scf_64 unplaced-scaffold na na PVQD01000064.1 <> na Primary Assembly 281 na scf_65 unplaced-scaffold na na PVQD01000065.1 <> na Primary Assembly 573 na scf_66 unplaced-scaffold na na PVQD01000066.1 <> na Primary Assembly 585 na scf_67 unplaced-scaffold na na PVQD01000067.1 <> na Primary Assembly 597 na scf_68 unplaced-scaffold na na PVQD01000068.1 <> na Primary Assembly 266 na scf_69 unplaced-scaffold na na PVQD01000069.1 <> na Primary Assembly 607 na scf_7 unplaced-scaffold na na PVQD01000007.1 <> na Primary Assembly 818520 na scf_70 unplaced-scaffold na na PVQD01000070.1 <> na Primary Assembly 426 na scf_71 unplaced-scaffold na na PVQD01000071.1 <> na Primary Assembly 609 na scf_72 unplaced-scaffold na na PVQD01000072.1 <> na Primary Assembly 613 na scf_74 unplaced-scaffold na na PVQD01000073.1 <> na Primary Assembly 624 na scf_75 unplaced-scaffold na na PVQD01000074.1 <> na Primary Assembly 382 na scf_76 unplaced-scaffold na na PVQD01000075.1 <> na Primary Assembly 615 na scf_77 unplaced-scaffold na na PVQD01000076.1 <> na Primary Assembly 675 na scf_78 unplaced-scaffold na na PVQD01000077.1 <> na Primary Assembly 744 na scf_79 unplaced-scaffold na na PVQD01000078.1 <> na Primary Assembly 615 na scf_8 unplaced-scaffold na na PVQD01000008.1 <> na Primary Assembly 583214 na scf_80 unplaced-scaffold na na PVQD01000079.1 <> na Primary Assembly 674 na scf_81 unplaced-scaffold na na PVQD01000080.1 <> na Primary Assembly 683 na scf_82 unplaced-scaffold na na PVQD01000081.1 <> na Primary Assembly 584 na scf_83 unplaced-scaffold na na PVQD01000082.1 <> na Primary Assembly 686 na scf_84 unplaced-scaffold na na PVQD01000083.1 <> na Primary Assembly 633 na scf_85 unplaced-scaffold na na PVQD01000084.1 <> na Primary Assembly 595 na scf_86 unplaced-scaffold na na PVQD01000085.1 <> na Primary Assembly 696 na scf_87 unplaced-scaffold na na PVQD01000086.1 <> na Primary Assembly 695 na scf_88 unplaced-scaffold na na PVQD01000087.1 <> na Primary Assembly 700 na scf_89 unplaced-scaffold na na PVQD01000088.1 <> na Primary Assembly 592 na scf_9 unplaced-scaffold na na PVQD01000009.1 <> na Primary Assembly 336863 na scf_90 unplaced-scaffold na na PVQD01000089.1 <> na Primary Assembly 765 na scf_91 unplaced-scaffold na na PVQD01000090.1 <> na Primary Assembly 612 na scf_92 unplaced-scaffold na na PVQD01000091.1 <> na Primary Assembly 467 na scf_93 unplaced-scaffold na na PVQD01000092.1 <> na Primary Assembly 742 na scf_94 unplaced-scaffold na na PVQD01000093.1 <> na Primary Assembly 728 na scf_95 unplaced-scaffold na na PVQD01000094.1 <> na Primary Assembly 393 na scf_96 unplaced-scaffold na na PVQD01000095.1 <> na Primary Assembly 750 na scf_97 unplaced-scaffold na na PVQD01000096.1 <> na Primary Assembly 747 na scf_98 unplaced-scaffold na na PVQD01000097.1 <> na Primary Assembly 788 na scf_99 unplaced-scaffold na na PVQD01000098.1 <> na Primary Assembly 494 na