# Assembly name: CSKR.v2 # Organism name: Clonorchis sinensis (oriental liver fluke) # Isolate: Cs-k2 # Taxid: 79923 # BioSample: SAMN07109486 # BioProject: PRJNA386618 # Submitter: The University of Melbourne # Date: 2021-04-12 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: NIRI02 # Assembly method: 3DDNA v. MAY-2020 # Expected final version: yes # Genome coverage: 200.0x # Sequencing technology: HiC and Oxford Nanopore # RefSeq category: Reference Genome # GenBank assembly accession: GCA_003604175.2 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003604185.2 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name niri01200014 assembled-molecule 1 Chromosome CM030369.1 <> na Primary Assembly 222349635 na niri01200056 assembled-molecule 2 Chromosome CM030370.1 <> na Primary Assembly 168711085 na niri01200017 assembled-molecule 3 Chromosome CM030371.1 <> na Primary Assembly 37397366 na niri01200068 assembled-molecule 4 Chromosome CM030372.1 <> na Primary Assembly 32902426 na niri01200048 assembled-molecule 5 Chromosome CM030373.1 <> na Primary Assembly 32400773 na niri01200006 assembled-molecule 6 Chromosome CM030374.1 <> na Primary Assembly 30531388 na niri01200042 assembled-molecule 7 Chromosome CM030375.1 <> na Primary Assembly 29611599 na niri01200001 unplaced-scaffold na na NIRI02000001.1 <> na Primary Assembly 11000 na niri01200037 unplaced-scaffold na na NIRI02000002.1 <> na Primary Assembly 63769 na niri01200073 unplaced-scaffold na na NIRI02000003.1 <> na Primary Assembly 27738 na niri01200032 unplaced-scaffold na na NIRI02000004.1 <> na Primary Assembly 125111 na niri01200027 unplaced-scaffold na na NIRI02000006.1 <> na Primary Assembly 10622 na niri01200063 unplaced-scaffold na na NIRI02000007.1 <> na Primary Assembly 45103 na niri01200022 unplaced-scaffold na na NIRI02000008.1 <> na Primary Assembly 81385 na niri01200058 unplaced-scaffold na na NIRI02000009.1 <> na Primary Assembly 33142 na niri01200053 unplaced-scaffold na na NIRI02000011.1 <> na Primary Assembly 129983 na niri01200012 unplaced-scaffold na na NIRI02000012.1 <> na Primary Assembly 17000 na niri01200007 unplaced-scaffold na na NIRI02000014.1 <> na Primary Assembly 141762 na niri01200043 unplaced-scaffold na na NIRI02000015.1 <> na Primary Assembly 11047 na niri01200002 unplaced-scaffold na na NIRI02000016.1 <> na Primary Assembly 34158 na niri01200038 unplaced-scaffold na na NIRI02000017.1 <> na Primary Assembly 13104 na niri01200074 unplaced-scaffold na na NIRI02000018.1 <> na Primary Assembly 22699 na niri01200033 unplaced-scaffold na na NIRI02000019.1 <> na Primary Assembly 52074 na niri01200069 unplaced-scaffold na na NIRI02000020.1 <> na Primary Assembly 36049 na niri01200028 unplaced-scaffold na na NIRI02000021.1 <> na Primary Assembly 16953 na niri01200064 unplaced-scaffold na na NIRI02000022.1 <> na Primary Assembly 21735 na niri01200023 unplaced-scaffold na na NIRI02000023.1 <> na Primary Assembly 51024 na niri01200059 unplaced-scaffold na na NIRI02000024.1 <> na Primary Assembly 54013 na niri01200018 unplaced-scaffold na na NIRI02000025.1 <> na Primary Assembly 72779 na niri01200054 unplaced-scaffold na na NIRI02000026.1 <> na Primary Assembly 113027 na niri01200013 unplaced-scaffold na na NIRI02000027.1 <> na Primary Assembly 11067 na niri01200049 unplaced-scaffold na na NIRI02000028.1 <> na Primary Assembly 35062 na niri01200008 unplaced-scaffold na na NIRI02000029.1 <> na Primary Assembly 107316 na niri01200044 unplaced-scaffold na na NIRI02000030.1 <> na Primary Assembly 142076 na niri01200003 unplaced-scaffold na na NIRI02000031.1 <> na Primary Assembly 17125 na niri01200039 unplaced-scaffold na na NIRI02000032.1 <> na Primary Assembly 33168 na niri01200075 unplaced-scaffold na na NIRI02000033.1 <> na Primary Assembly 11569 na niri01200034 unplaced-scaffold na na NIRI02000034.1 <> na Primary Assembly 195000 na niri01200070 unplaced-scaffold na na NIRI02000035.1 <> na Primary Assembly 102323 na niri01200029 unplaced-scaffold na na NIRI02000036.1 <> na Primary Assembly 27113 na niri01200065 unplaced-scaffold na na NIRI02000037.1 <> na Primary Assembly 34075 na niri01200024 unplaced-scaffold na na NIRI02000038.1 <> na Primary Assembly 19970 na niri01200060 unplaced-scaffold na na NIRI02000039.1 <> na Primary Assembly 213605 na niri01200019 unplaced-scaffold na na NIRI02000040.1 <> na Primary Assembly 39078 na niri01200055 unplaced-scaffold na na NIRI02000041.1 <> na Primary Assembly 32510 na niri01200050 unplaced-scaffold na na NIRI02000043.1 <> na Primary Assembly 26109 na niri01200009 unplaced-scaffold na na NIRI02000044.1 <> na Primary Assembly 13316 na niri01200045 unplaced-scaffold na na NIRI02000045.1 <> na Primary Assembly 10571 na niri01200004 unplaced-scaffold na na NIRI02000046.1 <> na Primary Assembly 20397 na niri01200040 unplaced-scaffold na na NIRI02000047.1 <> na Primary Assembly 14696 na niri01200076 unplaced-scaffold na na NIRI02000048.1 <> na Primary Assembly 23181 na niri01200035 unplaced-scaffold na na NIRI02000049.1 <> na Primary Assembly 15350 na niri01200071 unplaced-scaffold na na NIRI02000050.1 <> na Primary Assembly 64155 na niri01200030 unplaced-scaffold na na NIRI02000051.1 <> na Primary Assembly 13571 na niri01200066 unplaced-scaffold na na NIRI02000052.1 <> na Primary Assembly 49310 na niri01200025 unplaced-scaffold na na NIRI02000053.1 <> na Primary Assembly 31352 na niri01200061 unplaced-scaffold na na NIRI02000054.1 <> na Primary Assembly 49000 na niri01200020 unplaced-scaffold na na NIRI02000055.1 <> na Primary Assembly 28989 na niri01200015 unplaced-scaffold na na NIRI02000057.1 <> na Primary Assembly 17459 na niri01200051 unplaced-scaffold na na NIRI02000058.1 <> na Primary Assembly 11076 na niri01200010 unplaced-scaffold na na NIRI02000059.1 <> na Primary Assembly 272126 na niri01200046 unplaced-scaffold na na NIRI02000060.1 <> na Primary Assembly 145818 na niri01200005 unplaced-scaffold na na NIRI02000061.1 <> na Primary Assembly 205921 na niri01200041 unplaced-scaffold na na NIRI02000062.1 <> na Primary Assembly 11371 na niri01200077 unplaced-scaffold na na NIRI02000063.1 <> na Primary Assembly 24998 na niri01200036 unplaced-scaffold na na NIRI02000064.1 <> na Primary Assembly 57354 na niri01200072 unplaced-scaffold na na NIRI02000065.1 <> na Primary Assembly 73982 na niri01200031 unplaced-scaffold na na NIRI02000066.1 <> na Primary Assembly 13324 na niri01200067 unplaced-scaffold na na NIRI02000067.1 <> na Primary Assembly 25897 na niri01200026 unplaced-scaffold na na NIRI02000068.1 <> na Primary Assembly 15066 na niri01200062 unplaced-scaffold na na NIRI02000069.1 <> na Primary Assembly 30412 na niri01200021 unplaced-scaffold na na NIRI02000070.1 <> na Primary Assembly 352059 na niri01200057 unplaced-scaffold na na NIRI02000071.1 <> na Primary Assembly 26742 na niri01200016 unplaced-scaffold na na NIRI02000072.1 <> na Primary Assembly 11907 na niri01200052 unplaced-scaffold na na NIRI02000073.1 <> na Primary Assembly 23916 na niri01200011 unplaced-scaffold na na NIRI02000074.1 <> na Primary Assembly 112742 na niri01200047 unplaced-scaffold na na NIRI02000075.1 <> na Primary Assembly 202949 na niri01200078 unplaced-scaffold na na NIRI02000078.1 <> na Primary Assembly 19172 na