# Assembly name: ASM143527v1 # Organism name: Lactobacillus kefiranofaciens subsp. kefiranofaciens DSM 5016 = JCM 6985 (firmicutes) # Infraspecific name: strain=DSM 5016 # Taxid: 1423827 # BioSample: SAMN02369453 # BioProject: PRJNA222257 # Submitter: Shanghai Majorbio # Date: 2015-11-06 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: AZGG01 # Assembly method: SOAPdenovo v. 2 # Expected final version: yes # Genome coverage: 100x # Sequencing technology: Illumina MiSeq; Illumina HiSeq # Relation to type material: assembly from type material # GenBank assembly accession: GCA_001435275.1 # RefSeq assembly accession: GCF_001435275.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001435285.1 GCF_001435285.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1 unplaced-scaffold na na AZGG01000001.1 = NZ_AZGG01000001.1 Primary Assembly 232554 na Scaffold10 unplaced-scaffold na na AZGG01000010.1 = NZ_AZGG01000010.1 Primary Assembly 61710 na Scaffold100 unplaced-scaffold na na AZGG01000100.1 = NZ_AZGG01000100.1 Primary Assembly 1052 na Scaffold101 unplaced-scaffold na na AZGG01000101.1 = NZ_AZGG01000101.1 Primary Assembly 1009 na Scaffold102 unplaced-scaffold na na AZGG01000102.1 = NZ_AZGG01000102.1 Primary Assembly 935 na Scaffold103 unplaced-scaffold na na AZGG01000103.1 = NZ_AZGG01000103.1 Primary Assembly 886 na Scaffold104 unplaced-scaffold na na AZGG01000104.1 = NZ_AZGG01000104.1 Primary Assembly 832 na Scaffold105 unplaced-scaffold na na AZGG01000105.1 = NZ_AZGG01000105.1 Primary Assembly 793 na Scaffold106 unplaced-scaffold na na AZGG01000106.1 = NZ_AZGG01000106.1 Primary Assembly 779 na Scaffold107 unplaced-scaffold na na AZGG01000107.1 = NZ_AZGG01000107.1 Primary Assembly 750 na Scaffold108 unplaced-scaffold na na AZGG01000108.1 = NZ_AZGG01000108.1 Primary Assembly 713 na Scaffold109 unplaced-scaffold na na AZGG01000109.1 = NZ_AZGG01000109.1 Primary Assembly 657 na Scaffold11 unplaced-scaffold na na AZGG01000011.1 = NZ_AZGG01000011.1 Primary Assembly 58884 na Scaffold110 unplaced-scaffold na na AZGG01000110.1 = NZ_AZGG01000110.1 Primary Assembly 620 na Scaffold111 unplaced-scaffold na na AZGG01000111.1 = NZ_AZGG01000111.1 Primary Assembly 612 na Scaffold112 unplaced-scaffold na na AZGG01000112.1 = NZ_AZGG01000112.1 Primary Assembly 604 na Scaffold113 unplaced-scaffold na na AZGG01000113.1 = NZ_AZGG01000113.1 Primary Assembly 582 na Scaffold114 unplaced-scaffold na na AZGG01000114.1 = NZ_AZGG01000114.1 Primary Assembly 550 na Scaffold115 unplaced-scaffold na na AZGG01000115.1 = NZ_AZGG01000115.1 Primary Assembly 535 na Scaffold116 unplaced-scaffold na na AZGG01000116.1 = NZ_AZGG01000116.1 Primary Assembly 521 na Scaffold117 unplaced-scaffold na na AZGG01000117.1 = NZ_AZGG01000117.1 Primary Assembly 502 na Scaffold118 unplaced-scaffold na na AZGG01000118.1 = NZ_AZGG01000118.1 Primary Assembly 451 na Scaffold119 unplaced-scaffold na na AZGG01000119.1 = NZ_AZGG01000119.1 Primary Assembly 434 na Scaffold12 unplaced-scaffold na na AZGG01000012.1 = NZ_AZGG01000012.1 Primary Assembly 54815 na Scaffold120 unplaced-scaffold na na AZGG01000120.1 = NZ_AZGG01000120.1 Primary Assembly 433 na Scaffold121 unplaced-scaffold na na AZGG01000121.1 = NZ_AZGG01000121.1 Primary Assembly 416 na Scaffold122 unplaced-scaffold na na AZGG01000122.1 = NZ_AZGG01000122.1 Primary Assembly 406 na Scaffold123 unplaced-scaffold na na AZGG01000123.1 = NZ_AZGG01000123.1 Primary Assembly 394 na Scaffold124 unplaced-scaffold na na AZGG01000124.1 = NZ_AZGG01000124.1 Primary Assembly 365 na Scaffold125 unplaced-scaffold na na AZGG01000125.1 = NZ_AZGG01000125.1 Primary Assembly 341 na Scaffold126 unplaced-scaffold na na AZGG01000126.1 = NZ_AZGG01000126.1 Primary Assembly 283 na Scaffold127 unplaced-scaffold na na AZGG01000127.1 = NZ_AZGG01000127.1 Primary Assembly 260 na Scaffold128 unplaced-scaffold na na AZGG01000128.1 = NZ_AZGG01000128.1 Primary Assembly 257 na Scaffold129 unplaced-scaffold na na AZGG01000129.1 = NZ_AZGG01000129.1 Primary Assembly 236 na Scaffold13 unplaced-scaffold na na AZGG01000013.1 = NZ_AZGG01000013.1 Primary Assembly 52712 na Scaffold130 unplaced-scaffold na na AZGG01000130.1 = NZ_AZGG01000130.1 Primary Assembly 235 na Scaffold131 unplaced-scaffold na na AZGG01000131.1 = NZ_AZGG01000131.1 Primary Assembly 217 na Scaffold132 unplaced-scaffold na na AZGG01000132.1 = NZ_AZGG01000132.1 Primary Assembly 216 na Scaffold133 unplaced-scaffold na na AZGG01000133.1 = NZ_AZGG01000133.1 Primary Assembly 204 na Scaffold14 unplaced-scaffold na na AZGG01000014.1 = NZ_AZGG01000014.1 Primary Assembly 48843 na Scaffold15 unplaced-scaffold na na AZGG01000015.1 = NZ_AZGG01000015.1 Primary Assembly 48576 na Scaffold16 unplaced-scaffold na na AZGG01000016.1 = NZ_AZGG01000016.1 Primary Assembly 47222 na Scaffold17 unplaced-scaffold na na AZGG01000017.1 = NZ_AZGG01000017.1 Primary Assembly 41441 na Scaffold18 unplaced-scaffold na na AZGG01000018.1 = NZ_AZGG01000018.1 Primary Assembly 37830 na Scaffold19 unplaced-scaffold na na AZGG01000019.1 = NZ_AZGG01000019.1 Primary Assembly 33869 na Scaffold2 unplaced-scaffold na na AZGG01000002.1 = NZ_AZGG01000002.1 Primary Assembly 187360 na Scaffold20 unplaced-scaffold na na AZGG01000020.1 = NZ_AZGG01000020.1 Primary Assembly 33475 na Scaffold21 unplaced-scaffold na na AZGG01000021.1 = NZ_AZGG01000021.1 Primary Assembly 31350 na Scaffold22 unplaced-scaffold na na AZGG01000022.1 = NZ_AZGG01000022.1 Primary Assembly 30756 na Scaffold23 unplaced-scaffold na na AZGG01000023.1 = NZ_AZGG01000023.1 Primary Assembly 28980 na Scaffold24 unplaced-scaffold na na AZGG01000024.1 = NZ_AZGG01000024.1 Primary Assembly 25487 na Scaffold25 unplaced-scaffold na na AZGG01000025.1 = NZ_AZGG01000025.1 Primary Assembly 24771 na Scaffold26 unplaced-scaffold na na AZGG01000026.1 = NZ_AZGG01000026.1 Primary Assembly 24634 na Scaffold27 unplaced-scaffold na na AZGG01000027.1 = NZ_AZGG01000027.1 Primary Assembly 24139 na Scaffold28 unplaced-scaffold na na AZGG01000028.1 = NZ_AZGG01000028.1 Primary Assembly 22055 na Scaffold29 unplaced-scaffold na na AZGG01000029.1 = NZ_AZGG01000029.1 Primary Assembly 21994 na Scaffold3 unplaced-scaffold na na AZGG01000003.1 = NZ_AZGG01000003.1 Primary Assembly 113237 na Scaffold30 unplaced-scaffold na na AZGG01000030.1 = NZ_AZGG01000030.1 Primary Assembly 20578 na Scaffold31 unplaced-scaffold na na AZGG01000031.1 = NZ_AZGG01000031.1 Primary Assembly 19144 na Scaffold32 unplaced-scaffold na na AZGG01000032.1 = NZ_AZGG01000032.1 Primary Assembly 17773 na Scaffold33 unplaced-scaffold na na AZGG01000033.1 = NZ_AZGG01000033.1 Primary Assembly 17267 na Scaffold34 unplaced-scaffold na na AZGG01000034.1 = NZ_AZGG01000034.1 Primary Assembly 17252 na Scaffold35 unplaced-scaffold na na AZGG01000035.1 = NZ_AZGG01000035.1 Primary Assembly 13892 na Scaffold36 unplaced-scaffold na na AZGG01000036.1 = NZ_AZGG01000036.1 Primary Assembly 13544 na Scaffold37 unplaced-scaffold na na AZGG01000037.1 = NZ_AZGG01000037.1 Primary Assembly 13181 na Scaffold38 unplaced-scaffold na na AZGG01000038.1 = NZ_AZGG01000038.1 Primary Assembly 12975 na Scaffold39 unplaced-scaffold na na AZGG01000039.1 = NZ_AZGG01000039.1 Primary Assembly 12832 na Scaffold4 unplaced-scaffold na na AZGG01000004.1 = NZ_AZGG01000004.1 Primary Assembly 96646 na Scaffold40 unplaced-scaffold na na AZGG01000040.1 = NZ_AZGG01000040.1 Primary Assembly 12751 na Scaffold41 unplaced-scaffold na na AZGG01000041.1 = NZ_AZGG01000041.1 Primary Assembly 12489 na Scaffold42 unplaced-scaffold na na AZGG01000042.1 = NZ_AZGG01000042.1 Primary Assembly 11865 na Scaffold43 unplaced-scaffold na na AZGG01000043.1 = NZ_AZGG01000043.1 Primary Assembly 11672 na Scaffold44 unplaced-scaffold na na AZGG01000044.1 = NZ_AZGG01000044.1 Primary Assembly 11550 na Scaffold45 unplaced-scaffold na na AZGG01000045.1 = NZ_AZGG01000045.1 Primary Assembly 11159 na Scaffold46 unplaced-scaffold na na AZGG01000046.1 = NZ_AZGG01000046.1 Primary Assembly 10903 na Scaffold47 unplaced-scaffold na na AZGG01000047.1 = NZ_AZGG01000047.1 Primary Assembly 10369 na Scaffold48 unplaced-scaffold na na AZGG01000048.1 = NZ_AZGG01000048.1 Primary Assembly 10306 na Scaffold49 unplaced-scaffold na na AZGG01000049.1 = NZ_AZGG01000049.1 Primary Assembly 10239 na Scaffold5 unplaced-scaffold na na AZGG01000005.1 = NZ_AZGG01000005.1 Primary Assembly 91370 na Scaffold50 unplaced-scaffold na na AZGG01000050.1 = NZ_AZGG01000050.1 Primary Assembly 9318 na Scaffold51 unplaced-scaffold na na AZGG01000051.1 = NZ_AZGG01000051.1 Primary Assembly 8920 na Scaffold52 unplaced-scaffold na na AZGG01000052.1 = NZ_AZGG01000052.1 Primary Assembly 8780 na Scaffold53 unplaced-scaffold na na AZGG01000053.1 = NZ_AZGG01000053.1 Primary Assembly 8746 na Scaffold54 unplaced-scaffold na na AZGG01000054.1 = NZ_AZGG01000054.1 Primary Assembly 8256 na Scaffold55 unplaced-scaffold na na AZGG01000055.1 = NZ_AZGG01000055.1 Primary Assembly 7762 na Scaffold56 unplaced-scaffold na na AZGG01000056.1 = NZ_AZGG01000056.1 Primary Assembly 7648 na Scaffold57 unplaced-scaffold na na AZGG01000057.1 = NZ_AZGG01000057.1 Primary Assembly 7271 na Scaffold58 unplaced-scaffold na na AZGG01000058.1 = NZ_AZGG01000058.1 Primary Assembly 7062 na Scaffold59 unplaced-scaffold na na AZGG01000059.1 = NZ_AZGG01000059.1 Primary Assembly 6899 na Scaffold6 unplaced-scaffold na na AZGG01000006.1 = NZ_AZGG01000006.1 Primary Assembly 74811 na Scaffold60 unplaced-scaffold na na AZGG01000060.1 = NZ_AZGG01000060.1 Primary Assembly 6837 na Scaffold61 unplaced-scaffold na na AZGG01000061.1 = NZ_AZGG01000061.1 Primary Assembly 6581 na Scaffold62 unplaced-scaffold na na AZGG01000062.1 = NZ_AZGG01000062.1 Primary Assembly 6425 na Scaffold63 unplaced-scaffold na na AZGG01000063.1 = NZ_AZGG01000063.1 Primary Assembly 6295 na Scaffold64 unplaced-scaffold na na AZGG01000064.1 = NZ_AZGG01000064.1 Primary Assembly 6289 na Scaffold65 unplaced-scaffold na na AZGG01000065.1 = NZ_AZGG01000065.1 Primary Assembly 6100 na Scaffold66 unplaced-scaffold na na AZGG01000066.1 = NZ_AZGG01000066.1 Primary Assembly 5921 na Scaffold67 unplaced-scaffold na na AZGG01000067.1 = NZ_AZGG01000067.1 Primary Assembly 5842 na Scaffold68 unplaced-scaffold na na AZGG01000068.1 = NZ_AZGG01000068.1 Primary Assembly 5603 na Scaffold69 unplaced-scaffold na na AZGG01000069.1 = NZ_AZGG01000069.1 Primary Assembly 5187 na Scaffold7 unplaced-scaffold na na AZGG01000007.1 = NZ_AZGG01000007.1 Primary Assembly 69413 na Scaffold70 unplaced-scaffold na na AZGG01000070.1 = NZ_AZGG01000070.1 Primary Assembly 5010 na Scaffold71 unplaced-scaffold na na AZGG01000071.1 = NZ_AZGG01000071.1 Primary Assembly 4651 na Scaffold72 unplaced-scaffold na na AZGG01000072.1 = NZ_AZGG01000072.1 Primary Assembly 4482 na Scaffold73 unplaced-scaffold na na AZGG01000073.1 = NZ_AZGG01000073.1 Primary Assembly 4375 na Scaffold74 unplaced-scaffold na na AZGG01000074.1 = NZ_AZGG01000074.1 Primary Assembly 4051 na Scaffold75 unplaced-scaffold na na AZGG01000075.1 = NZ_AZGG01000075.1 Primary Assembly 4046 na Scaffold76 unplaced-scaffold na na AZGG01000076.1 = NZ_AZGG01000076.1 Primary Assembly 3198 na Scaffold77 unplaced-scaffold na na AZGG01000077.1 = NZ_AZGG01000077.1 Primary Assembly 3067 na Scaffold78 unplaced-scaffold na na AZGG01000078.1 = NZ_AZGG01000078.1 Primary Assembly 2773 na Scaffold79 unplaced-scaffold na na AZGG01000079.1 = NZ_AZGG01000079.1 Primary Assembly 2731 na Scaffold8 unplaced-scaffold na na AZGG01000008.1 = NZ_AZGG01000008.1 Primary Assembly 67701 na Scaffold80 unplaced-scaffold na na AZGG01000080.1 = NZ_AZGG01000080.1 Primary Assembly 2547 na Scaffold81 unplaced-scaffold na na AZGG01000081.1 = NZ_AZGG01000081.1 Primary Assembly 2478 na Scaffold82 unplaced-scaffold na na AZGG01000082.1 = NZ_AZGG01000082.1 Primary Assembly 2448 na Scaffold83 unplaced-scaffold na na AZGG01000083.1 = NZ_AZGG01000083.1 Primary Assembly 2373 na Scaffold84 unplaced-scaffold na na AZGG01000084.1 = NZ_AZGG01000084.1 Primary Assembly 2301 na Scaffold85 unplaced-scaffold na na AZGG01000085.1 = NZ_AZGG01000085.1 Primary Assembly 2293 na Scaffold86 unplaced-scaffold na na AZGG01000086.1 = NZ_AZGG01000086.1 Primary Assembly 2202 na Scaffold87 unplaced-scaffold na na AZGG01000087.1 = NZ_AZGG01000087.1 Primary Assembly 2179 na Scaffold88 unplaced-scaffold na na AZGG01000088.1 = NZ_AZGG01000088.1 Primary Assembly 2127 na Scaffold89 unplaced-scaffold na na AZGG01000089.1 = NZ_AZGG01000089.1 Primary Assembly 2104 na Scaffold9 unplaced-scaffold na na AZGG01000009.1 = NZ_AZGG01000009.1 Primary Assembly 62130 na Scaffold90 unplaced-scaffold na na AZGG01000090.1 = NZ_AZGG01000090.1 Primary Assembly 2045 na Scaffold91 unplaced-scaffold na na AZGG01000091.1 = NZ_AZGG01000091.1 Primary Assembly 1940 na Scaffold92 unplaced-scaffold na na AZGG01000092.1 = NZ_AZGG01000092.1 Primary Assembly 1913 na Scaffold93 unplaced-scaffold na na AZGG01000093.1 = NZ_AZGG01000093.1 Primary Assembly 1649 na Scaffold94 unplaced-scaffold na na AZGG01000094.1 = NZ_AZGG01000094.1 Primary Assembly 1468 na Scaffold95 unplaced-scaffold na na AZGG01000095.1 = NZ_AZGG01000095.1 Primary Assembly 1423 na Scaffold96 unplaced-scaffold na na AZGG01000096.1 = NZ_AZGG01000096.1 Primary Assembly 1333 na Scaffold97 unplaced-scaffold na na AZGG01000097.1 = NZ_AZGG01000097.1 Primary Assembly 1307 na Scaffold98 unplaced-scaffold na na AZGG01000098.1 = NZ_AZGG01000098.1 Primary Assembly 1190 na Scaffold99 unplaced-scaffold na na AZGG01000099.1 = NZ_AZGG01000099.1 Primary Assembly 1187 na