This directory contains reciprocal-best netted chains for xenTro7-hg38. - xenTro7.hg38.rbest.net.gz: xenTro7-referenced recip.best net to hg38. - xenTro7.hg38.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from xenTro7 to hg38 through the recip.best net. - hg38.xenTro7.rbest.net.gz: hg38-referenced recip.best net. - hg38.xenTro7.rbest.chain.gz: recip.best "liftOver" chains. - directory axtRBestNet/ - reciprocal best alignments in axt file format http://genome.ucsc.edu/goldenPath/help/axt.html