This directory contains a dump of the UCSC genome annotation 
database for the Build 2 Version 1 (panTro2) chimp Arachne 
assembly produced by the Chimp Genome Sequencing Consortium. 

Files included in this directory (updated nightly):

  - *.sql files: the MySQL commands used to create the tables.  See 
    http://genome.ucsc.edu/goldenPath/gbdDescriptions.html for 
    descriptions of the tables.

  - *.txt.gz files: the database tables in a tab-delimited format 
    compressed with gzip. 

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If you plan to download a large file or multiple files from this 
directory, we recommend that you use ftp rather than downloading the 
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, 
then go to the directory goldenPath/panTro2/database/. To download 
multiple files, use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory) 

All the annotations in this directory are freely usable for any purpose.  
The chimpanzee sequence is made freely available before scientific 
publication with the following understanding: 

1. The data may be freely downloaded, used in analyses, and repackaged 
   in databases. 
2. Users are free to use the data in scientific papers analyzing 
   particular genes and regions if the providers of these data are 
   properly acknowledged. See http://genome.ucsc.edu/goldenPath/credits.html
   for credit information.
3. The centers producing the data reserve the right to publish the initial
   large-scale analyses of the data set, including large-scale identification 
   of regions of evolutionary conservation and large-scale genomic assembly.
   Large-scale refers to regions with size on the order of a chromosome (that 
   is, 30 Mb or more). 
4. Any redistribution of the data should carry this notice.