This directory contains reciprocal-best netted chains for micMur2-tarSyr2.

 - micMur2.tarSyr2.rbest.net.gz: micMur2-referenced recip.best net to tarSyr2.
 - micMur2.tarSyr2.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from micMur2 to tarSyr2 through the recip.best net.

 - tarSyr2.micMur2.rbest.net.gz: tarSyr2-referenced recip.best net.
 - tarSyr2.micMur2.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/ directory contains reciprocal best alignments in axt format