Name | Last modified | Size | Description | |
---|---|---|---|---|
Parent Directory | - | |||
README.html | 2020-12-18 07:04 | 2.6K | ||
README.txt | 2023-11-01 13:20 | 2.1K | ||
hg38.ensGene.gtf.gz | 2020-01-10 09:33 | 27M | ||
hg38.knownGene.gtf.gz | 2024-08-19 15:14 | 45M | ||
hg38.ncbiRefSeq.gtf.gz | 2024-09-11 08:29 | 42M | ||
hg38.refGene.gtf.gz | 2020-01-10 09:33 | 23M | ||
md5sum.txt | 2024-09-04 09:52 | 221 | ||
md5sum.txt.2024-09-03 | 2023-08-29 15:26 | 221 | ||
This directory contains GTF files for the main gene transcript sets where available. They are sourced from the following gene model tables: ncbiRefSeq, refGene, ensGene, knownGene
Not all files are available for every assembly. For more information on the source tables see the respective data track description page in the assembly. For example: http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg38&g=refGene
The files are created using the genePredToGtf utility with the additional -utr flag. Utilities can be found in the following directory: http://hgdownload.soe.ucsc.edu/admin/exe/
genePredToGtf -utr hg38 ncbiRefSeq hg38.ncbiRefSeq.gtf