This directory contains reciprocal-best netted chains for hg19-gorGor5. - hg19.gorGor5.rbest.net.gz: hg19-referenced recip.best net to gorGor5. - hg19.gorGor5.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from hg19 to gorGor5 through the recip.best net. - gorGor5.hg19.rbest.net.gz: gorGor5-referenced recip.best net. - gorGor5.hg19.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/*.hg19.gorGor5.net.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html