This directory contains reciprocal-best netted chains for hg19-capHir1.

 - hg19.capHir1.rbest.net.gz: hg19-referenced recip.best net to capHir1.
 - hg19.capHir1.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from hg19 to capHir1 through the recip.best net.

 - capHir1.hg19.rbest.net.gz: capHir1-referenced recip.best net.
 - capHir1.hg19.rbest.chain.gz: recip.best "liftOver" chains.