[DIR] Parent Directory

This directory contains data generated by the Tenenbaum/SunyAlbany lab as part of the ENCODE project. Further information is available in the SUNY Rip GeneST track description.

Data is RESTRICTED FROM USE in publication until the restriction date noted for the given data file.

There are two files within this directory that contain information about the downloads:

  • files.txt which is a tab-separated file with the name and metadata for each download.
  • md5sum.txt which is a list of the md5sum output for each download.
    • RESTRICTED
    until    		  FileSizeSubmitted  Details
      2011-03-01wgEncodeSunyAlbanyGeneStGm12878Celf1RbpAssocRna.broadPeak.gz  16K  2010-06-01  dataType=GeneSt; cell=GM12878; antibody=CELF1; subId=1237; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=Mil_05621 antibody; view=RbpAssocRna; type=broadPeak; md5sum=49b946d87aaa6680f15de3b2e11e61f4; origAssembly=hg18
      2011-03-01wgEncodeSunyAlbanyGeneStGm12878Elavl1RbpAssocRna.broadPeak.gz  183K  2010-06-01  dataType=GeneSt; cell=GM12878; antibody=ELAVL1; subId=1237; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=SC_5261 antibody; view=RbpAssocRna; type=broadPeak; md5sum=1447a5ba1456dd924ca5a87270194930; origAssembly=hg18
      2011-03-01wgEncodeSunyAlbanyGeneStGm12878Igf2bp1RbpAssocRna.broadPeak.gz  78K  2010-06-01  dataType=GeneSt; cell=GM12878; antibody=IGF2BP1; subId=1237; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=SC_21027 antibody; view=RbpAssocRna; type=broadPeak; md5sum=e023e6e9a47c4c23a710f9a26e5edbdf; origAssembly=hg18
      2011-03-01wgEncodeSunyAlbanyGeneStGm12878Pabpc1RbpAssocRna.broadPeak.gz  187K  2010-06-01  dataType=GeneSt; cell=GM12878; antibody=PABPC1; subId=1237; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=Sig_P6246 antibody; view=RbpAssocRna; type=broadPeak; md5sum=4e4995832057d5f018f2115d678b3bb1; origAssembly=hg18
      2011-03-01wgEncodeSunyAlbanyGeneStGm12878SlbpRbpAssocRna.broadPeak.gz  131K  2010-06-01  dataType=GeneSt; cell=GM12878; antibody=SLBP; subId=1237; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=SC_26522 antibody; view=RbpAssocRna; type=broadPeak; md5sum=4d91058d2426e6bdb18a2f81c9b84661; origAssembly=hg18
      2011-03-01wgEncodeSunyAlbanyGeneStGm12878T7tagRbpAssocRna.broadPeak.gz  273  2010-06-01  dataType=GeneSt; cell=GM12878; antibody=T7Tag; subId=1237; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=Nov_69522 antibody; view=RbpAssocRna; type=broadPeak; md5sum=df2e20b63019a372d14f311640df84e8; origAssembly=hg18
      2011-03-01wgEncodeSunyAlbanyGeneStGm12878RipinputRbpAssocRna.broadPeak.gz  465K  2010-06-01  dataType=GeneSt; cell=GM12878; antibody=ripInput; subId=1237; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=Input; view=RbpAssocRna; type=broadPeak; md5sum=e3b91480a7734a51dbec438137026972; origAssembly=hg18
      2011-09-10wgEncodeSunyAlbanyGeneStH1hescElavl1RbpAssocRna.broadPeak.gz  83K  2010-12-10  dataType=GeneSt; cell=H1-hESC; antibody=ELAVL1; subId=3084; dataVersion=ENCODE Jan 2011 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=SC_5261 antibody; view=RbpAssocRna; type=broadPeak; md5sum=b23cc50b0d90988aa6d30fef2fd079f4
      2011-09-10wgEncodeSunyAlbanyGeneStH1hescT7tagRbpAssocRna.broadPeak.gz  4.2K  2010-12-10  dataType=GeneSt; cell=H1-hESC; antibody=T7Tag; subId=3084; dataVersion=ENCODE Jan 2011 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=Nov_69522,Mil_AB3790 antibodies; view=RbpAssocRna; type=broadPeak; md5sum=00e2781973eebdc4f50dc49beb98294d
      2011-09-10wgEncodeSunyAlbanyGeneStH1hescRipinputRbpAssocRna.broadPeak.gz  628K  2010-12-10  dataType=GeneSt; cell=H1-hESC; antibody=ripInput; subId=3084; dataVersion=ENCODE Jan 2011 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=Input; view=RbpAssocRna; type=broadPeak; md5sum=b59e5f9a4f163905227da05229396fa8
      2011-03-18wgEncodeSunyAlbanyGeneStHelas3Elavl1RbpAssocRna.broadPeak.gz  181K  2010-06-18  dataType=GeneSt; cell=HeLa-S3; antibody=ELAVL1; subId=1613; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=SC_5261 antibody; view=RbpAssocRna; type=broadPeak; md5sum=ae70d890c1df6e0eb0a2c468c9cd17b0; origAssembly=hg18
      2011-03-18wgEncodeSunyAlbanyGeneStHelas3Pabpc1RbpAssocRna.broadPeak.gz  70K  2010-06-18  dataType=GeneSt; cell=HeLa-S3; antibody=PABPC1; subId=1613; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=Sig_P6246 antibody; view=RbpAssocRna; type=broadPeak; md5sum=c2c02dd0491ab93ed460dd2886398551; origAssembly=hg18
      2011-03-18wgEncodeSunyAlbanyGeneStHelas3T7tagRbpAssocRna.broadPeak.gz  69K  2010-06-18  dataType=GeneSt; cell=HeLa-S3; antibody=T7Tag; subId=1613; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=Nov_69522,Mil_AB3790 antibodies; view=RbpAssocRna; type=broadPeak; md5sum=71d6a8a925e883645a063e4e5790dcaa; origAssembly=hg18
      2011-03-01wgEncodeSunyAlbanyGeneStHelas3RipinputRbpAssocRna.broadPeak.gz  509K  2010-06-01  dataType=GeneSt; cell=HeLa-S3; antibody=ripInput; subId=1237; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=Input; view=RbpAssocRna; type=broadPeak; md5sum=e7a4dea7d030e15fc7cde6a913a7ecc6; origAssembly=hg18
      2011-03-18wgEncodeSunyAlbanyGeneStHepg2Elavl1RbpAssocRna.broadPeak.gz  152K  2010-06-18  dataType=GeneSt; cell=HepG2; antibody=ELAVL1; subId=1613; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=SC_5261 antibody; view=RbpAssocRna; type=broadPeak; md5sum=2db4472c5fbc6890759f42184b94501e; origAssembly=hg18
      2011-03-18wgEncodeSunyAlbanyGeneStHepg2Pabpc1RbpAssocRna.broadPeak.gz  99K  2010-06-18  dataType=GeneSt; cell=HepG2; antibody=PABPC1; subId=1613; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=Sig_P6246 antibody; view=RbpAssocRna; type=broadPeak; md5sum=09e0e9ec42c382960fba6bcb718d40a8; origAssembly=hg18
      2011-03-18wgEncodeSunyAlbanyGeneStHepg2T7tagRbpAssocRna.broadPeak.gz  80K  2010-06-18  dataType=GeneSt; cell=HepG2; antibody=T7Tag; subId=1613; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=Nov_69522,Mil_AB3790 antibodies; view=RbpAssocRna; type=broadPeak; md5sum=ce97def32652ef990972f076d1bd9792; origAssembly=hg18
      2011-03-01wgEncodeSunyAlbanyGeneStHepg2RipinputRbpAssocRna.broadPeak.gz  507K  2010-06-01  dataType=GeneSt; cell=HepG2; antibody=ripInput; subId=1237; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=Input; view=RbpAssocRna; type=broadPeak; md5sum=9f1c5ca81ab623a23dcf52cf2cc8554e; origAssembly=hg18
      2011-03-18wgEncodeSunyAlbanyGeneStK562Celf1RbpAssocRna.broadPeak.gz  66K  2010-06-18  dataType=GeneSt; cell=K562; antibody=CELF1; subId=1613; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=Mil_05621 antibody; view=RbpAssocRna; type=broadPeak; md5sum=6667f7be009b56036cfbb95df2e4dc1a; origAssembly=hg18
      2011-03-01wgEncodeSunyAlbanyGeneStK562Elavl1RbpAssocRna.broadPeak.gz  94K  2010-06-01  dataType=GeneSt; cell=K562; antibody=ELAVL1; subId=1237; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=SC_5261 antibody; view=RbpAssocRna; type=broadPeak; md5sum=ced30d9f05c98101e3405e5cbd5109ef; origAssembly=hg18
      2011-03-01wgEncodeSunyAlbanyGeneStK562Pabpc1RbpAssocRna.broadPeak.gz  128K  2010-06-01  dataType=GeneSt; cell=K562; antibody=PABPC1; subId=1237; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=Sig_P6246 antibody; view=RbpAssocRna; type=broadPeak; md5sum=fc9c0ee9465d0850851777741a0eab0f; origAssembly=hg18
      2011-03-01wgEncodeSunyAlbanyGeneStK562SlbpRbpAssocRna.broadPeak.gz  753  2010-06-01  dataType=GeneSt; cell=K562; antibody=SLBP; subId=1237; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=SC_26522,Mil_061376 antibodies; view=RbpAssocRna; type=broadPeak; md5sum=70c347bdb263319e243ceb521de2f349; origAssembly=hg18
      2011-03-01wgEncodeSunyAlbanyGeneStK562T7tagRbpAssocRna.broadPeak.gz  52K  2010-06-01  dataType=GeneSt; cell=K562; antibody=T7Tag; subId=1237; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=Nov_69522 antibody; view=RbpAssocRna; type=broadPeak; md5sum=f1a30ddfe8032ce570070857454b357c; origAssembly=hg18
      2011-03-01wgEncodeSunyAlbanyGeneStK562RipinputRbpAssocRna.broadPeak.gz  526K  2010-06-01  dataType=GeneSt; cell=K562; antibody=ripInput; subId=1237; dataVersion=ENCODE June 2010 Freeze; grant=Tenenbaum; lab=SunyAlbany; labVersion=Input; view=RbpAssocRna; type=broadPeak; md5sum=45b6d107c7df94f0dfba60b6a0847200; origAssembly=hg18
    24 files