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wgEncodeRikenCageA549CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3422; labExpId=K16; bioRep=021WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapAlnRep1; type=bai; md5sum=6a1f2a4043e6ee827db74e49b69212f2; size=4.8M
wgEncodeRikenCageA549CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3426; labExpId=K17; bioRep=022WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapAlnRep2; type=bam; md5sum=19b5a4f9929fe434cb11983a93433584; size=295M
wgEncodeRikenCageA549CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3426; labExpId=K17; bioRep=022WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapAlnRep2; type=bai; md5sum=8382e9f1decfbe90bc25c2b19a8572a6; size=4.7M
wgEncodeRikenCageA549CellPapMinusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3481; geoSampleAccession=GSM849359; labExpId=K16; bioRep=021WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapMinusSignalRep1; type=bigWig; md5sum=cb45e712458ae6c29623d0e1cf7bc5b2; size=65M
wgEncodeRikenCageA549CellPapMinusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3482; geoSampleAccession=GSM849359; labExpId=K17; bioRep=022WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapMinusSignalRep2; type=bigWig; md5sum=cac38e9a81172791a918cdfb5c6775f3; size=53M
wgEncodeRikenCageA549CellPapPlusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3481; geoSampleAccession=GSM849359; labExpId=K16; bioRep=021WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapPlusSignalRep1; type=bigWig; md5sum=189929e27bbae8fbc603a66fd646e238; size=67M
wgEncodeRikenCageA549CellPapPlusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3482; geoSampleAccession=GSM849359; labExpId=K17; bioRep=022WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapPlusSignalRep2; type=bigWig; md5sum=286cb07c282eb64f4204349d61fa3678; size=55M
wgEncodeRikenCageA549CellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3422; geoSampleAccession=GSM849359; labExpId=K16; bioRep=021WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=56fb9223f20ea47d8fc9ac986de14d0f; size=522M
wgEncodeRikenCageA549CellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3426; geoSampleAccession=GSM849359; labExpId=K17; bioRep=022WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=ba92c4b67807582aa6a9572073e69ee3; size=368M
wgEncodeRikenCageA549CellPapTssGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=A549; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4517; geoSampleAccession=GSM849359; labExpId=K16,K17; bioRep=021WC,022WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=cae06fe184558274964cc7a34164bf89; size=3.0M
wgEncodeRikenCageA549CellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=A549; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849359; labExpId=K16,K17; bioRep=021WC,022WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapTssHmm; type=bedRnaElements; md5sum=90b1f1f807c5b5bbf416814185427425; size=1.7M
wgEncodeRikenCageAg04450CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3421; labExpId=K12; bioRep=017WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapAlnRep1; type=bam; md5sum=b4e3933531d3d4ba91680a2d19cbd497; size=530M
wgEncodeRikenCageAg04450CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3421; labExpId=K12; bioRep=017WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapAlnRep1; type=bai; md5sum=fde66c3c3d6613bfb9f142b84fc6f0af; size=4.9M
wgEncodeRikenCageAg04450CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3427; labExpId=K13; bioRep=018WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapAlnRep2; type=bam; md5sum=6137d7782b16a37eea79cf2580ffbce5; size=456M
wgEncodeRikenCageAg04450CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3427; labExpId=K13; bioRep=018WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapAlnRep2; type=bai; md5sum=1b5991705c53711377cfc1aed5da1729; size=4.9M
wgEncodeRikenCageAg04450CellPapMinusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3479; geoSampleAccession=GSM849358; labExpId=K12; bioRep=017WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapMinusSignalRep1; type=bigWig; md5sum=f0a6517e60934654068bdc9e403abb1e; size=68M
wgEncodeRikenCageAg04450CellPapMinusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3480; geoSampleAccession=GSM849358; labExpId=K13; bioRep=018WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapMinusSignalRep2; type=bigWig; md5sum=a5a9e730880d6f3d05f9bcbf476ed337; size=62M
wgEncodeRikenCageAg04450CellPapPlusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3479; geoSampleAccession=GSM849358; labExpId=K12; bioRep=017WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapPlusSignalRep1; type=bigWig; md5sum=3655e816beecbbf279250e30a9691b66; size=70M
wgEncodeRikenCageAg04450CellPapPlusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3480; geoSampleAccession=GSM849358; labExpId=K13; bioRep=018WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapPlusSignalRep2; type=bigWig; md5sum=3582ebe3e115d576f987a5f5b61e04e4; size=64M
wgEncodeRikenCageAg04450CellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3421; geoSampleAccession=GSM849358; labExpId=K12; bioRep=017WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=73716d9b241a824ecc1a80539fe326ae; size=669M
wgEncodeRikenCageAg04450CellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3427; geoSampleAccession=GSM849358; labExpId=K13; bioRep=018WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=74ba9d09a4c64ef086ba64317fd149e6; size=563M
wgEncodeRikenCageAg04450CellPapTssGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=AG04450; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4520; geoSampleAccession=GSM849358; labExpId=K12,K13; bioRep=017WC,018WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=cd8c202675587912e01c8ca4c2b24344; size=3.1M
wgEncodeRikenCageAg04450CellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=AG04450; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849358; labExpId=K12,K13; bioRep=017WC,018WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapTssHmm; type=bedRnaElements; md5sum=d2c02648c526bee76c4e0de95c40d6cc; size=2.1M
wgEncodeRikenCageBjCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3428; labExpId=K18; bioRep=037WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapAlnRep1; type=bam; md5sum=a1132dad095044a9d2db183fdb09e3ff; size=418M
wgEncodeRikenCageBjCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3428; labExpId=K18; bioRep=037WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapAlnRep1; type=bai; md5sum=32292329cf614ce8fae8161ae5e4f385; size=4.8M
wgEncodeRikenCageBjCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3429; labExpId=K19; bioRep=038WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapAlnRep2; type=bam; md5sum=f4f7f44b1ac7044c8e9a886cccd5c391; size=421M
wgEncodeRikenCageBjCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3429; labExpId=K19; bioRep=038WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapAlnRep2; type=bai; md5sum=4967ce59a18a9317d9aca85351ca78ca; size=5.0M
wgEncodeRikenCageBjCellPapMinusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3483; geoSampleAccession=GSM849328; labExpId=K18; bioRep=037WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapMinusSignalRep1; type=bigWig; md5sum=364067cd07ff38b75ad2e65b2d244d31; size=59M
wgEncodeRikenCageBjCellPapMinusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3484; geoSampleAccession=GSM849328; labExpId=K19; bioRep=038WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapMinusSignalRep2; type=bigWig; md5sum=af499c5f6e76233e78ab0c07f9676b51; size=63M
wgEncodeRikenCageBjCellPapPlusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3483; geoSampleAccession=GSM849328; labExpId=K18; bioRep=037WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapPlusSignalRep1; type=bigWig; md5sum=f8a208df77bad82c559a9c79454b27cc; size=61M
wgEncodeRikenCageBjCellPapPlusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3484; geoSampleAccession=GSM849328; labExpId=K19; bioRep=038WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapPlusSignalRep2; type=bigWig; md5sum=e8984fe76c3bf0b9808485aca37169dc; size=65M
wgEncodeRikenCageBjCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3428; geoSampleAccession=GSM849328; labExpId=K18; bioRep=037WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=2bdeccb1e52715ccbffc0e2da5f5676d; size=516M
wgEncodeRikenCageBjCellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3429; geoSampleAccession=GSM849328; labExpId=K19; bioRep=038WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=40c7327ec23ce4d16f20d584fe981b87; size=500M
wgEncodeRikenCageBjCellPapTssGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=BJ; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4498; geoSampleAccession=GSM849328; labExpId=K18,K19; bioRep=037WC,038WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=77f308b9e1745c719328d6a96f030278; size=3.0M
wgEncodeRikenCageBjCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=BJ; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849328; labExpId=K18,K19; bioRep=037WC,038WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapTssHmm; type=bedRnaElements; md5sum=88225b49eca770419d470bb2a8092559; size=1.7M
wgEncodeRikenCageGm12878CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3946; labExpId=J72; bioRep=003WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapAlnRep1; type=bam; md5sum=ea9f4c22893c4742e10c7a650eb708b1; size=598M
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wgEncodeRikenCageGm12878CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3951; labExpId=J73; bioRep=004WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapAlnRep2; type=bam; md5sum=1f7c9c2db92bf0c340342d3b79c2bb56; size=651M
wgEncodeRikenCageGm12878CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3951; labExpId=J73; bioRep=004WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapAlnRep2; type=bai; md5sum=31c490fd5faccc8052d5c164607be4ab; size=5.1M
wgEncodeRikenCageGm12878CellPapMinusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3946; geoSampleAccession=GSM849368; labExpId=J72; bioRep=003WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapMinusSignalRep1; type=bigWig; md5sum=8cd60821188d81a0fff923b913a2f156; size=13M
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wgEncodeRikenCageGm12878CellPapPlusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3946; geoSampleAccession=GSM849368; labExpId=J72; bioRep=003WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapPlusSignalRep1; type=bigWig; md5sum=6b3c771491b80a0c2a79d908a5e1f60b; size=15M
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wgEncodeRikenCageGm12878CellPapRawDataRep1.fastq.tgz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=2389; geoSampleAccession=GSM849368; labExpId=J72; bioRep=003WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=d6c970a05ebafc50f8f109e9e8a515b0; size=730M
wgEncodeRikenCageGm12878CellPapRawDataRep2.fastq.tgz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=2394; geoSampleAccession=GSM849368; labExpId=J73; bioRep=004WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=b62e0151d40da03be7d5d2a31238a23c; size=791M
wgEncodeRikenCageGm12878CellPapTssGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=GM12878; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4531; geoSampleAccession=GSM849368; labExpId=J72,J73; bioRep=003WC,004WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=42dad26024f54a14d89c8ac0a4a89192; size=3.1M
wgEncodeRikenCageGm12878CellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=GM12878; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849368; labExpId=J72,J73; bioRep=003WC,004WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapTssHmm; type=bedRnaElements; md5sum=16b7f46fc29362165e8898e0f2852057; size=5.7M
wgEncodeRikenCageGm12878CytosolLongnonpolyaAln.bam	objStatus=renamed; project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; replicate=0; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateResubmitted=2010-06-21; dateUnrestricted=2009-12-09; subId=1797; bioRep=Generation 0; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageGm12878CytosolLongnonpolyaAln; type=bam; md5sum=ce61eeed6ffb7b9ea07c9e912a2aa65d; size=571M
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wgEncodeRikenCageGm12878CytosolPamAln.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateResubmitted=2010-06-21; dateUnrestricted=2009-12-09; subId=1797; labExpId=I27; bioRep=gen0104C; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageGm12878CytosolPamAln; type=bam; md5sum=ce61eeed6ffb7b9ea07c9e912a2aa65d; size=571M
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wgEncodeRikenCageGm12878CytosolPamMinusSignal.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateResubmitted=2010-06-21; dateUnrestricted=2009-12-09; subId=1797; geoSampleAccession=GSM849329; labExpId=I27; bioRep=gen0104C; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageGm12878CytosolPamMinusSignal; type=bigWig; md5sum=16f881e10265380521e309683375cf3d; size=12M
wgEncodeRikenCageGm12878CytosolPamPlusSignal.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateResubmitted=2010-06-21; dateUnrestricted=2009-12-09; subId=1797; geoSampleAccession=GSM849329; labExpId=I27; bioRep=gen0104C; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageGm12878CytosolPamPlusSignal; type=bigWig; md5sum=5fec08d3900bf7c1c20a9b35689f5663; size=12M
wgEncodeRikenCageGm12878CytosolPamRawData.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateUnrestricted=2009-12-09; subId=2433; geoSampleAccession=GSM849329; labExpId=I27; bioRep=gen0104C; type=fastq; md5sum=156618e589854a9454497754f0b0b003; size=562M
wgEncodeRikenCageGm12878CytosolPamTssGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4526; geoSampleAccession=GSM849329; labExpId=I27; bioRep=gen0104C; type=gtf; md5sum=327f9a60e47cefc8ad0ce78122d9f472; size=2.6M
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wgEncodeRikenCageNhekNucleusPapTssGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001154; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4529; geoSampleAccession=GSM849361; labExpId=K09; bioRep=027N; seqPlatform=Illumina_GA2x; type=gtf; md5sum=a4359018a31ea1259a6fad197a869d8c; size=2.8M
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wgEncodeRikenCageProstateCellLongnonpolyaAln.bam	objStatus=renamed; project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=prostate; localization=cell; rnaExtract=longNonPolyA; replicate=0; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1813; bioRep=Generation 0; softwareVersion=Delve version 0.9; tableName=wgEncodeRikenCageProstateCellLongnonpolyaAln; type=bam; md5sum=1d926e84501daaf20f7cde1c46108b77; size=625M
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wgEncodeRikenCageProstateCellPamMinusSignal.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=prostate; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1813; geoSampleAccession=GSM849336; labExpId=I09; bioRep=gen0159WC; softwareVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageProstateCellPamMinusSignal; type=bigWig; md5sum=78471d5d5a867cd1642a09261f239926; size=17M
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wgEncodeRikenCageSknshraCellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-05-31; dateUnrestricted=2012-03-02; subId=4167; geoSampleAccession=GSM849362; labExpId=K14; bioRep=019WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapPlusRawRep1; type=bigWig; md5sum=aba33e70ca776b71c380a163f692c867; size=11M
wgEncodeRikenCageSknshraCellPapPlusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3339; geoSampleAccession=GSM849362; labExpId=K15; bioRep=020WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapPlusSignalRep2; type=bigWig; md5sum=19083c96c5056b16a4345fb333e68b2a; size=65M
wgEncodeRikenCageSknshraCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3423; geoSampleAccession=GSM849362; labExpId=K14; bioRep=019WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=32f189b19f433b49d0c7179945493373; size=513M
wgEncodeRikenCageSknshraCellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3339; geoSampleAccession=GSM849362; labExpId=K15; bioRep=020WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=2a25a6a95dc0aff867be7c50bd8ecded; size=454M
wgEncodeRikenCageSknshraCellPapTssGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4524; geoSampleAccession=GSM849362; labExpId=K14,K15; bioRep=019WC,020WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=5cfcfa3ed99060207aa475c2e0db341d; size=3.1M
wgEncodeRikenCageSknshraCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849362; labExpId=K14,K15; bioRep=019WC,020WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapTssHmm; type=bedRnaElements; md5sum=85a826f3bb0ae4fa64ab1fb890532b74; size=1.9M