[DIR] Parent Directory

This directory contains data generated by the Gingeras/RIKEN lab as part of the ENCODE project. Further information is available in the RIKEN CAGE track description.

Data is RESTRICTED FROM USE in publication until the restriction date noted for the given data file.

There are two files within this directory that contain information about the downloads:

  • files.txt which is a tab-separated file with the name and metadata for each download.
  • md5sum.txt which is a list of the md5sum output for each download.
    • RESTRICTED
    until    		  FileSizeSubmitted  Details
      2009-12-09wgEncodeRikenCageGm12878CytosolLongnonpolyaAln.bam.bai  5.5M  2009-03-09  dataType=Cage; cell=GM12878; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1797; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bai; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-12-09wgEncodeRikenCageGm12878CytosolLongnonpolyaAln.bam  571M  2009-03-09  dataType=Cage; cell=GM12878; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1797; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bam; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-12-09wgEncodeRikenCageGm12878CytosolLongnonpolyaMinusClusters.bigWig  12M  2009-03-09  dataType=Cage; cell=GM12878; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1797; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=MinusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-12-09wgEncodeRikenCageGm12878CytosolLongnonpolyaPlusClusters.bigWig  12M  2009-03-09  dataType=Cage; cell=GM12878; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1797; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=PlusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-12-09wgEncodeRikenCageGm12878CytosolLongnonpolyaRawData.fastq.gz  562M  2009-03-09  dataType=Cage; cell=GM12878; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=2433; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=Generation 0; dccRep=1; origAssembly=hg18
      2011-06-21wgEncodeRikenCageGm12878NucleusLongnonpolyaAlnRep1.bam.bai  3.4M  2010-09-21  dataType=Cage; cell=GM12878; rnaExtract=longNonPolyA; localization=nucleus; replicate=1; labExpId=J59; subId=2350; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; dccRep=1; origAssembly=hg19
      2011-06-21wgEncodeRikenCageGm12878NucleusLongnonpolyaAlnRep1.bam  50M  2010-09-21  dataType=Cage; cell=GM12878; rnaExtract=longNonPolyA; localization=nucleus; replicate=1; labExpId=J59; subId=2350; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; dccRep=1; origAssembly=hg19
      2011-06-21wgEncodeRikenCageGm12878NucleusLongnonpolyaMinusClustersRep1.bigWig  1.0M  2010-09-21  dataType=Cage; cell=GM12878; rnaExtract=longNonPolyA; localization=nucleus; replicate=1; labExpId=J59; subId=2350; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; dccRep=1; origAssembly=hg19
      2011-06-21wgEncodeRikenCageGm12878NucleusLongnonpolyaPlusClustersRep1.bigWig  1012K  2010-09-21  dataType=Cage; cell=GM12878; rnaExtract=longNonPolyA; localization=nucleus; replicate=1; labExpId=J59; subId=2350; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; dccRep=1; origAssembly=hg19
      2009-12-09wgEncodeRikenCageGm12878NucleusLongnonpolyaRawDataRep1.fastq.gz  76M  2009-03-09  dataType=Cage; cell=GM12878; rnaExtract=longNonPolyA; localization=nucleus; replicate=1; labExpId=J59; subId=2350; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; dccRep=1; origAssembly=hg19
      2010-10-13wgEncodeRikenCageGm12878NucleolusTotalAln.bam.bai  5.6M  2010-01-14  dataType=Cage; cell=GM12878; rnaExtract=total; localization=nucleolus; replicate=0; subId=2125; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=Generation 0; dateReSubmitted=2010-08-23; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageGm12878NucleolusTotalAln.bam  1.1G  2010-01-14  dataType=Cage; cell=GM12878; rnaExtract=total; localization=nucleolus; replicate=0; subId=2125; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=Generation 0; dateReSubmitted=2010-08-23; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageGm12878NucleolusTotalMinusClusters.bigWig  18M  2010-01-14  dataType=Cage; cell=GM12878; rnaExtract=total; localization=nucleolus; replicate=0; subId=2125; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-08-23; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageGm12878NucleolusTotalPlusClusters.bigWig  19M  2010-01-14  dataType=Cage; cell=GM12878; rnaExtract=total; localization=nucleolus; replicate=0; subId=2125; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-08-23; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageGm12878NucleolusTotalRawData.fastq.gz  1.2G  2010-01-14  dataType=Cage; cell=GM12878; rnaExtract=total; localization=nucleolus; replicate=0; subId=2433; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=Generation 0; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageH1hescCellLongnonpolyaAln.bam.bai  5.2M  2010-01-13  dataType=Cage; cell=H1-hESC; rnaExtract=longNonPolyA; localization=cell; replicate=0; subId=1799; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; softwareVersion=Delve version 0.9; view=Alignments; type=bai; bioRep=Generation 0; dateReSubmitted=2010-09-22; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageH1hescCellLongnonpolyaAln.bam  728M  2010-01-13  dataType=Cage; cell=H1-hESC; rnaExtract=longNonPolyA; localization=cell; replicate=0; subId=1799; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; softwareVersion=Delve version 0.9; view=Alignments; type=bam; bioRep=Generation 0; dateReSubmitted=2010-09-22; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageH1hescCellLongnonpolyaMinusClusters.bigWig  6.5M  2010-01-13  dataType=Cage; cell=H1-hESC; rnaExtract=longNonPolyA; localization=cell; replicate=0; subId=1799; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; softwareVersion=bedtools v2.7.1; view=MinusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-09-22; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageH1hescCellLongnonpolyaPlusClusters.bigWig  9.2M  2010-01-13  dataType=Cage; cell=H1-hESC; rnaExtract=longNonPolyA; localization=cell; replicate=0; subId=1799; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; softwareVersion=bedtools v2.7.1; view=PlusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-09-22; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageH1hescCellLongnonpolyaRawData.fastq.gz  933M  2010-01-13  dataType=Cage; cell=H1-hESC; rnaExtract=longNonPolyA; localization=cell; replicate=0; subId=2433; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=Generation 0; dccRep=1; origAssembly=hg18
      2011-06-21wgEncodeRikenCageH1hescCellPapAlnRep1.bam.bai  5.0M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J74; subId=2380; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=005WC; dccRep=1; labProtocolId=005WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescCellPapAlnRep1.bam  665M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J74; subId=2380; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=005WC; dccRep=1; labProtocolId=005WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescCellPapMinusClustersRep1.bigWig  5.9M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J74; subId=2380; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=005WC; dccRep=1; labProtocolId=005WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescCellPapPlusClustersRep1.bigWig  6.0M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J74; subId=2380; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=005WC; dccRep=1; labProtocolId=005WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescCellPapRawDataRep1.fastq.gz  805M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J74; subId=2380; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=005WC; dccRep=1; labProtocolId=005WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescCellPapAlnRep2.bam.bai  5.2M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J75; subId=2370; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=006WC; dccRep=2; labProtocolId=006WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescCellPapAlnRep2.bam  639M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J75; subId=2370; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=006WC; dccRep=2; labProtocolId=006WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescCellPapMinusClustersRep2.bigWig  6.8M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J75; subId=2370; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=006WC; dccRep=2; labProtocolId=006WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescCellPapPlusClustersRep2.bigWig  9.2M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J75; subId=2370; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=006WC; dccRep=2; labProtocolId=006WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescCellPapRawDataRep2.fastq.gz  765M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J75; subId=2370; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=006WC; dccRep=2; labProtocolId=006WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescCytosolPapAlnRep2.bam.bai  4.9M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J86; subId=2379; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=006C; dccRep=2; labProtocolId=006C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescCytosolPapAlnRep2.bam  628M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J86; subId=2379; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=006C; dccRep=2; labProtocolId=006C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescCytosolPapMinusClustersRep2.bigWig  5.1M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J86; subId=2379; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=006C; dccRep=2; labProtocolId=006C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescCytosolPapPlusClustersRep2.bigWig  5.2M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J86; subId=2379; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=006C; dccRep=2; labProtocolId=006C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescCytosolPapRawDataRep2.fastq.gz  787M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J86; subId=2379; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=006C; dccRep=2; labProtocolId=006C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescNucleusPapAlnRep2.bam.bai  5.4M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J95; subId=2360; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=006N; dccRep=2; labProtocolId=006N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescNucleusPapAlnRep2.bam  671M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J95; subId=2360; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=006N; dccRep=2; labProtocolId=006N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescNucleusPapMinusClustersRep2.bigWig  13M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J95; subId=2360; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=006N; dccRep=2; labProtocolId=006N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescNucleusPapPlusClustersRep2.bigWig  13M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J95; subId=2360; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=006N; dccRep=2; labProtocolId=006N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageH1hescNucleusPapRawDataRep2.fastq.gz  775M  2010-09-21  dataType=Cage; cell=H1-hESC; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J95; subId=2360; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=006N; dccRep=2; labProtocolId=006N+cage; origAssembly=hg19
      2010-10-13wgEncodeRikenCageHuvecCytosolLongnonpolyaAln.bam.bai  5.5M  2010-01-13  dataType=Cage; cell=HUVEC; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1800; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bai; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHuvecCytosolLongnonpolyaAln.bam  885M  2010-01-13  dataType=Cage; cell=HUVEC; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1800; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bam; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHuvecCytosolLongnonpolyaMinusClusters.bigWig  13M  2010-01-13  dataType=Cage; cell=HUVEC; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1800; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=MinusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHuvecCytosolLongnonpolyaPlusClusters.bigWig  13M  2010-01-13  dataType=Cage; cell=HUVEC; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1800; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=PlusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHuvecCytosolLongnonpolyaRawData.fastq.gz  499M  2010-01-13  dataType=Cage; cell=HUVEC; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=2433; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=Generation 0; dccRep=1; origAssembly=hg18
      2011-06-21wgEncodeRikenCageHuvecCellPapAlnRep1.bam.bai  4.8M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J78; subId=2376; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=009WC; dccRep=1; labProtocolId=009WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCellPapAlnRep1.bam  618M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J78; subId=2376; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=009WC; dccRep=1; labProtocolId=009WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCellPapMinusClustersRep1.bigWig  7.2M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J78; subId=2376; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=009WC; dccRep=1; labProtocolId=009WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCellPapPlusClustersRep1.bigWig  5.4M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J78; subId=2376; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=009WC; dccRep=1; labProtocolId=009WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCellPapRawDataRep1.fastq.gz  770M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J78; subId=2376; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=009WC; dccRep=1; labProtocolId=009WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCellPapAlnRep2.bam.bai  5.0M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J79; subId=2388; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=010WC; dccRep=2; labProtocolId=010WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCellPapAlnRep2.bam  626M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J79; subId=2388; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=010WC; dccRep=2; labProtocolId=010WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCellPapMinusClustersRep2.bigWig  7.7M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J79; subId=2388; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=010WC; dccRep=2; labProtocolId=010WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCellPapPlusClustersRep2.bigWig  6.0M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J79; subId=2388; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=010WC; dccRep=2; labProtocolId=010WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCellPapRawDataRep2.fastq.gz  824M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J79; subId=2388; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=010WC; dccRep=2; labProtocolId=010WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCytosolPapAlnRep3.bam.bai  5.2M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cytosol; replicate=3; labExpId=K03; subId=2368; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=029C; dccRep=1; labProtocolId=029C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCytosolPapAlnRep3.bam  658M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cytosol; replicate=3; labExpId=K03; subId=2368; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=029C; dccRep=1; labProtocolId=029C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCytosolPapMinusClustersRep3.bigWig  5.8M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cytosol; replicate=3; labExpId=K03; subId=2368; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=029C; dccRep=1; labProtocolId=029C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCytosolPapPlusClustersRep3.bigWig  5.8M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cytosol; replicate=3; labExpId=K03; subId=2368; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=029C; dccRep=1; labProtocolId=029C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCytosolPapRawDataRep3.fastq.gz  802M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cytosol; replicate=3; labExpId=K03; subId=2368; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=029C; dccRep=1; labProtocolId=029C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCytosolPapAlnRep4.bam.bai  5.1M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cytosol; replicate=4; labExpId=K04; subId=2354; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=030C; dccRep=2; labProtocolId=030C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCytosolPapAlnRep4.bam  689M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cytosol; replicate=4; labExpId=K04; subId=2354; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=030C; dccRep=2; labProtocolId=030C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCytosolPapMinusClustersRep4.bigWig  5.6M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cytosol; replicate=4; labExpId=K04; subId=2354; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=030C; dccRep=2; labProtocolId=030C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCytosolPapPlusClustersRep4.bigWig  5.8M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cytosol; replicate=4; labExpId=K04; subId=2354; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=030C; dccRep=2; labProtocolId=030C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecCytosolPapRawDataRep4.fastq.gz  825M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=cytosol; replicate=4; labExpId=K04; subId=2354; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=030C; dccRep=2; labProtocolId=030C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecNucleusPapAlnRep3.bam.bai  5.6M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=nucleus; replicate=3; labExpId=K05; subId=2377; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=029N; dccRep=1; labProtocolId=029N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecNucleusPapAlnRep3.bam  825M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=nucleus; replicate=3; labExpId=K05; subId=2377; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=029N; dccRep=1; labProtocolId=029N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecNucleusPapMinusClustersRep3.bigWig  18M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=nucleus; replicate=3; labExpId=K05; subId=2377; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=029N; dccRep=1; labProtocolId=029N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecNucleusPapPlusClustersRep3.bigWig  19M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=nucleus; replicate=3; labExpId=K05; subId=2377; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=029N; dccRep=1; labProtocolId=029N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecNucleusPapRawDataRep3.fastq.gz  844M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=nucleus; replicate=3; labExpId=K05; subId=2377; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=029N; dccRep=1; labProtocolId=029N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecNucleusPapAlnRep4.bam.bai  5.5M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=nucleus; replicate=4; labExpId=K06; subId=2356; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=030N; dccRep=2; labProtocolId=030N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecNucleusPapAlnRep4.bam  785M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=nucleus; replicate=4; labExpId=K06; subId=2356; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=030N; dccRep=2; labProtocolId=030N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecNucleusPapMinusClustersRep4.bigWig  17M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=nucleus; replicate=4; labExpId=K06; subId=2356; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=030N; dccRep=2; labProtocolId=030N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecNucleusPapPlusClustersRep4.bigWig  17M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=nucleus; replicate=4; labExpId=K06; subId=2356; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=030N; dccRep=2; labProtocolId=030N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHuvecNucleusPapRawDataRep4.fastq.gz  813M  2010-09-21  dataType=Cage; cell=HUVEC; rnaExtract=longPolyA; localization=nucleus; replicate=4; labExpId=K06; subId=2356; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=030N; dccRep=2; labProtocolId=030N+cage; origAssembly=hg19
      2011-07-29wgEncodeRikenCageHelas3CytosolLongnonpolyaAln.bam.bai  4.0M  2010-10-29  dataType=Cage; cell=HeLa-S3; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; labExpId=J56; subId=2784; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=Generation 0; dccRep=1; labProtocolId=; origAssembly=hg18
      2011-07-29wgEncodeRikenCageHelas3CytosolLongnonpolyaAln.bam  216M  2010-10-29  dataType=Cage; cell=HeLa-S3; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; labExpId=J56; subId=2784; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=Generation 0; dccRep=1; labProtocolId=; origAssembly=hg18
      2011-07-29wgEncodeRikenCageHelas3CytosolLongnonpolyaMinusClusters.bigWig  1.6M  2010-10-29  dataType=Cage; cell=HeLa-S3; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; labExpId=J56; subId=2784; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusClusters; type=bigWig; bioRep=Generation 0; dccRep=1; labProtocolId=; origAssembly=hg18
      2011-07-29wgEncodeRikenCageHelas3CytosolLongnonpolyaPlusClusters.bigWig  1.6M  2010-10-29  dataType=Cage; cell=HeLa-S3; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; labExpId=J56; subId=2784; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusClusters; type=bigWig; bioRep=Generation 0; dccRep=1; labProtocolId=; origAssembly=hg18
      2011-07-29wgEncodeRikenCageHelas3CytosolLongnonpolyaRawData.fastq.gz  824M  2010-10-29  dataType=Cage; cell=HeLa-S3; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; labExpId=J56; subId=2784; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=Generation 0; dccRep=1; labProtocolId=; origAssembly=hg18
      2011-06-21wgEncodeRikenCageHelas3CellPapAlnRep1.bam.bai  4.9M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J80; subId=2363; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=011WC; dccRep=1; labProtocolId=011WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CellPapAlnRep1.bam  634M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J80; subId=2363; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=011WC; dccRep=1; labProtocolId=011WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CellPapMinusClustersRep1.bigWig  5.4M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J80; subId=2363; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=011WC; dccRep=1; labProtocolId=011WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CellPapPlusClustersRep1.bigWig  7.4M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J80; subId=2363; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=011WC; dccRep=1; labProtocolId=011WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CellPapRawDataRep1.fastq.gz  814M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J80; subId=2363; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=011WC; dccRep=1; labProtocolId=011WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CellPapAlnRep2.bam.bai  4.9M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J81; subId=2374; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=012WC; dccRep=2; labProtocolId=012WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CellPapAlnRep2.bam  613M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J81; subId=2374; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=012WC; dccRep=2; labProtocolId=012WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CellPapMinusClustersRep2.bigWig  5.3M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J81; subId=2374; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=012WC; dccRep=2; labProtocolId=012WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CellPapPlusClustersRep2.bigWig  5.3M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J81; subId=2374; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=012WC; dccRep=2; labProtocolId=012WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CellPapRawDataRep2.fastq.gz  807M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J81; subId=2374; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=012WC; dccRep=2; labProtocolId=012WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CytosolPapAlnRep1.bam.bai  4.7M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cytosol; replicate=1; labExpId=J87; subId=2364; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=011C; dccRep=1; labProtocolId=011C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CytosolPapAlnRep1.bam  543M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cytosol; replicate=1; labExpId=J87; subId=2364; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=011C; dccRep=1; labProtocolId=011C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CytosolPapMinusClustersRep1.bigWig  4.4M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cytosol; replicate=1; labExpId=J87; subId=2364; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=011C; dccRep=1; labProtocolId=011C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CytosolPapPlusClustersRep1.bigWig  4.5M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cytosol; replicate=1; labExpId=J87; subId=2364; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=011C; dccRep=1; labProtocolId=011C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CytosolPapRawDataRep1.fastq.gz  674M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cytosol; replicate=1; labExpId=J87; subId=2364; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=011C; dccRep=1; labProtocolId=011C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CytosolPapAlnRep2.bam.bai  4.3M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J88; subId=2355; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=012C; dccRep=2; labProtocolId=012C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CytosolPapAlnRep2.bam  582M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J88; subId=2355; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=012C; dccRep=2; labProtocolId=012C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CytosolPapMinusClustersRep2.bigWig  3.8M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J88; subId=2355; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=012C; dccRep=2; labProtocolId=012C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CytosolPapPlusClustersRep2.bigWig  3.8M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J88; subId=2355; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=012C; dccRep=2; labProtocolId=012C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3CytosolPapRawDataRep2.fastq.gz  750M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J88; subId=2355; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=012C; dccRep=2; labProtocolId=012C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3NucleusPapAlnRep1.bam.bai  5.2M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=nucleus; replicate=1; labExpId=J96; subId=2386; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=011N; dccRep=1; labProtocolId=011N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3NucleusPapAlnRep1.bam  474M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=nucleus; replicate=1; labExpId=J96; subId=2386; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=011N; dccRep=1; labProtocolId=011N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3NucleusPapMinusClustersRep1.bigWig  9.1M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=nucleus; replicate=1; labExpId=J96; subId=2386; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=011N; dccRep=1; labProtocolId=011N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3NucleusPapPlusClustersRep1.bigWig  9.2M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=nucleus; replicate=1; labExpId=J96; subId=2386; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=011N; dccRep=1; labProtocolId=011N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3NucleusPapRawDataRep1.fastq.gz  546M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=nucleus; replicate=1; labExpId=J96; subId=2386; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=011N; dccRep=1; labProtocolId=011N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3NucleusPapAlnRep2.bam.bai  5.3M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J97; subId=2384; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=012N; dccRep=2; labProtocolId=012N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3NucleusPapAlnRep2.bam  545M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J97; subId=2384; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=012N; dccRep=2; labProtocolId=012N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3NucleusPapMinusClustersRep2.bigWig  9.9M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J97; subId=2384; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=012N; dccRep=2; labProtocolId=012N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3NucleusPapPlusClustersRep2.bigWig  11M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J97; subId=2384; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=012N; dccRep=2; labProtocolId=012N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHelas3NucleusPapRawDataRep2.fastq.gz  901M  2010-09-21  dataType=Cage; cell=HeLa-S3; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J97; subId=2384; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=012N; dccRep=2; labProtocolId=012N+cage; origAssembly=hg19
      2011-07-29wgEncodeRikenCageHelas3NucleolusTotalAln.bam.bai  3.6M  2010-10-29  dataType=Cage; cell=HeLa-S3; rnaExtract=total; localization=nucleolus; replicate=0; labExpId=J58; subId=2783; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=Generation 0; dccRep=1; labProtocolId=; origAssembly=hg18
      2011-07-29wgEncodeRikenCageHelas3NucleolusTotalAln.bam  227M  2010-10-29  dataType=Cage; cell=HeLa-S3; rnaExtract=total; localization=nucleolus; replicate=0; labExpId=J58; subId=2783; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=Generation 0; dccRep=1; labProtocolId=; origAssembly=hg18
      2011-07-29wgEncodeRikenCageHelas3NucleolusTotalMinusClusters.bigWig  1.3M  2010-10-29  dataType=Cage; cell=HeLa-S3; rnaExtract=total; localization=nucleolus; replicate=0; labExpId=J58; subId=2783; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusClusters; type=bigWig; bioRep=Generation 0; dccRep=1; labProtocolId=; origAssembly=hg18
      2011-07-29wgEncodeRikenCageHelas3NucleolusTotalPlusClusters.bigWig  1.3M  2010-10-29  dataType=Cage; cell=HeLa-S3; rnaExtract=total; localization=nucleolus; replicate=0; labExpId=J58; subId=2783; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusClusters; type=bigWig; bioRep=Generation 0; dccRep=1; labProtocolId=; origAssembly=hg18
      2011-07-29wgEncodeRikenCageHelas3NucleolusTotalRawData.fastq.gz  1.1G  2010-10-29  dataType=Cage; cell=HeLa-S3; rnaExtract=total; localization=nucleolus; replicate=0; labExpId=J58; subId=2783; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=Generation 0; dccRep=1; labProtocolId=; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHepg2CytosolLongnonpolyaAln.bam.bai  5.5M  2010-01-13  dataType=Cage; cell=HepG2; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1801; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bai; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHepg2CytosolLongnonpolyaAln.bam  417M  2010-01-13  dataType=Cage; cell=HepG2; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1801; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bam; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHepg2CytosolLongnonpolyaMinusClusters.bigWig  8.2M  2010-01-13  dataType=Cage; cell=HepG2; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1801; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=MinusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHepg2CytosolLongnonpolyaPlusClusters.bigWig  12M  2010-01-13  dataType=Cage; cell=HepG2; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1801; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=PlusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHepg2CytosolLongnonpolyaRawData.fastq.gz  534M  2010-01-14  dataType=Cage; cell=HepG2; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=2433; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=Generation 0; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHepg2NucleusLongnonpolyaAln.bam.bai  5.7M  2010-01-13  dataType=Cage; cell=HepG2; rnaExtract=longNonPolyA; localization=nucleus; replicate=0; subId=1802; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bai; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHepg2NucleusLongnonpolyaAln.bam  805M  2010-01-13  dataType=Cage; cell=HepG2; rnaExtract=longNonPolyA; localization=nucleus; replicate=0; subId=1802; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bam; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHepg2NucleusLongnonpolyaMinusClusters.bigWig  27M  2010-01-13  dataType=Cage; cell=HepG2; rnaExtract=longNonPolyA; localization=nucleus; replicate=0; subId=1802; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=MinusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHepg2NucleusLongnonpolyaPlusClusters.bigWig  28M  2010-01-13  dataType=Cage; cell=HepG2; rnaExtract=longNonPolyA; localization=nucleus; replicate=0; subId=1802; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=PlusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHepg2NucleusLongnonpolyaRawData.fastq.gz  779M  2010-01-14  dataType=Cage; cell=HepG2; rnaExtract=longNonPolyA; localization=nucleus; replicate=0; subId=2433; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=Generation 0; dccRep=1; origAssembly=hg18
      2011-06-21wgEncodeRikenCageHepg2CellPapAlnRep1.bam.bai  5.3M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=K01; subId=2381; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=013WC; dccRep=1; labProtocolId=013WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CellPapAlnRep1.bam  681M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=K01; subId=2381; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=013WC; dccRep=1; labProtocolId=013WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CellPapMinusClustersRep1.bigWig  9.8M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=K01; subId=2381; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=013WC; dccRep=1; labProtocolId=013WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CellPapPlusClustersRep1.bigWig  11M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=K01; subId=2381; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=013WC; dccRep=1; labProtocolId=013WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CellPapRawDataRep1.fastq.gz  812M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=K01; subId=2381; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=013WC; dccRep=1; labProtocolId=013WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CellPapAlnRep2.bam.bai  5.2M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=K02; subId=2378; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=014WC; dccRep=2; fileiIndex=wgEncodeRikenCageHepg2CellPapAlnRep2.bam.bai; labProtocolId=014WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CellPapAlnRep2.bam  677M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=K02; subId=2378; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=014WC; dccRep=2; fileiIndex=wgEncodeRikenCageHepg2CellPapAlnRep2.bam.bai; labProtocolId=014WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CellPapMinusClustersRep2.bigWig  9.7M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=K02; subId=2378; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=014WC; dccRep=2; labProtocolId=014WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CellPapPlusClustersRep2.bigWig  9.4M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=K02; subId=2378; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=014WC; dccRep=2; labProtocolId=014WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CellPapRawDataRep2.fastq.gz  813M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=K02; subId=2378; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=014WC; dccRep=2; labProtocolId=014WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CytosolPapAlnRep1.bam.bai  4.6M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cytosol; replicate=1; labExpId=J89; subId=2357; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=013C; dccRep=1; labProtocolId=013C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CytosolPapAlnRep1.bam  517M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cytosol; replicate=1; labExpId=J89; subId=2357; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=013C; dccRep=1; labProtocolId=013C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CytosolPapMinusClustersRep1.bigWig  4.1M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cytosol; replicate=1; labExpId=J89; subId=2357; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=013C; dccRep=1; labProtocolId=013C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CytosolPapPlusClustersRep1.bigWig  4.2M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cytosol; replicate=1; labExpId=J89; subId=2357; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=013C; dccRep=1; labProtocolId=013C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CytosolPapRawDataRep1.fastq.gz  656M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cytosol; replicate=1; labExpId=J89; subId=2357; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=013C; dccRep=1; labProtocolId=013C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CytosolPapAlnRep2.bam.bai  4.8M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J90; subId=2369; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=014C; dccRep=2; labProtocolId=014C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CytosolPapAlnRep2.bam  600M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J90; subId=2369; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=014C; dccRep=2; labProtocolId=014C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CytosolPapMinusClustersRep2.bigWig  4.6M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J90; subId=2369; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=014C; dccRep=2; labProtocolId=014C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CytosolPapPlusClustersRep2.bigWig  4.7M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J90; subId=2369; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=014C; dccRep=2; labProtocolId=014C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2CytosolPapRawDataRep2.fastq.gz  748M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J90; subId=2369; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=014C; dccRep=2; labProtocolId=014C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2NucleusPapAlnRep1.bam.bai  5.2M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=nucleus; replicate=1; labExpId=J98; subId=2375; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=013N; dccRep=1; labProtocolId=013N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2NucleusPapAlnRep1.bam  578M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=nucleus; replicate=1; labExpId=J98; subId=2375; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=013N; dccRep=1; labProtocolId=013N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2NucleusPapMinusClustersRep1.bigWig  12M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=nucleus; replicate=1; labExpId=J98; subId=2375; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=013N; dccRep=1; labProtocolId=013N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2NucleusPapPlusClustersRep1.bigWig  12M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=nucleus; replicate=1; labExpId=J98; subId=2375; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=013N; dccRep=1; labProtocolId=013N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2NucleusPapRawDataRep1.fastq.gz  674M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=nucleus; replicate=1; labExpId=J98; subId=2375; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=013N; dccRep=1; labProtocolId=013N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2NucleusPapAlnRep2.bam.bai  5.2M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J99; subId=2366; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=014N; dccRep=2; labProtocolId=014N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2NucleusPapAlnRep2.bam  612M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J99; subId=2366; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=014N; dccRep=2; labProtocolId=014N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2NucleusPapMinusClustersRep2.bigWig  11M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J99; subId=2366; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=014N; dccRep=2; labProtocolId=014N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2NucleusPapPlusClustersRep2.bigWig  11M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J99; subId=2366; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=014N; dccRep=2; labProtocolId=014N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageHepg2NucleusPapRawDataRep2.fastq.gz  717M  2010-09-21  dataType=Cage; cell=HepG2; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J99; subId=2366; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=014N; dccRep=2; labProtocolId=014N+cage; origAssembly=hg19
      2010-10-13wgEncodeRikenCageHepg2NucleolusTotalAln.bam.bai  5.6M  2010-01-13  dataType=Cage; cell=HepG2; rnaExtract=total; localization=nucleolus; replicate=0; subId=2124; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=Generation 0; dateReSubmitted=2010-08-23; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHepg2NucleolusTotalAln.bam  1.3G  2010-01-13  dataType=Cage; cell=HepG2; rnaExtract=total; localization=nucleolus; replicate=0; subId=2124; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=Generation 0; dateReSubmitted=2010-08-23; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHepg2NucleolusTotalMinusClusters.bigWig  20M  2010-01-13  dataType=Cage; cell=HepG2; rnaExtract=total; localization=nucleolus; replicate=0; subId=2124; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-08-23; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHepg2NucleolusTotalPlusClusters.bigWig  20M  2010-01-13  dataType=Cage; cell=HepG2; rnaExtract=total; localization=nucleolus; replicate=0; subId=2124; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-08-23; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageHepg2NucleolusTotalRawData.fastq.gz  1.5G  2010-01-14  dataType=Cage; cell=HepG2; rnaExtract=total; localization=nucleolus; replicate=0; subId=2433; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=Generation 0; dccRep=1; origAssembly=hg18
      2009-09-09wgEncodeRikenCageK562CytosolLongnonpolyaMinusClusters.bigWig  4.0M  2008-12-09  dataType=Cage; cell=K562; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1805; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; softwareVersion=bedtools v2.7.1; view=MinusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-09-22; dccRep=1; origAssembly=hg18
      2009-09-09wgEncodeRikenCageK562CytosolLongnonpolyaPlusClusters.bigWig  3.5M  2008-12-09  dataType=Cage; cell=K562; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1805; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; softwareVersion=bedtools v2.7.1; view=PlusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-09-22; dccRep=1; origAssembly=hg18
      2009-09-09wgEncodeRikenCageK562CytosolLongnonpolyaAln.bam.bai  5.0M  2008-12-09  dataType=Cage; cell=K562; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1805; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; softwareVersion=bowtie version 0.12.5; view=Alignments; type=bai; bioRep=Generation 0; dateReSubmitted=2010-09-22; dccRep=1; origAssembly=hg18
      2009-09-09wgEncodeRikenCageK562CytosolLongnonpolyaAln.bam  329M  2008-12-09  dataType=Cage; cell=K562; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1805; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; softwareVersion=bowtie version 0.12.5; view=Alignments; type=bam; bioRep=Generation 0; dateReSubmitted=2010-09-22; dccRep=1; origAssembly=hg18
      2009-09-09wgEncodeRikenCageK562CytosolLongnonpolyaRawData.csfasta.gz  319M  2008-12-09  dataType=Cage; cell=K562; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=2438; dataVersion=ENCODE Jan 2011 Freeze; dateResubmitted=2010-09-24; grant=Gingeras; lab=RIKEN; view=RawData; type=csfasta; bioRep=Generation 0; dccRep=1; origAssembly=hg18
      2009-09-09wgEncodeRikenCageK562CytosolLongnonpolyaRawData2.csqual.gz  685M  2008-12-09  dataType=Cage; cell=K562; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=2438; dataVersion=ENCODE Jan 2011 Freeze; dateResubmitted=2010-09-24; grant=Gingeras; lab=RIKEN; view=RawData2; type=csqual; bioRep=Generation 0; dccRep=1; origAssembly=hg18
      2009-09-09wgEncodeRikenCageK562NucleusLongnonpolyaAln.bam.bai  5.5M  2008-12-09  dataType=Cage; cell=K562; rnaExtract=longNonPolyA; localization=nucleus; replicate=0; subId=2127; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=Generation 0; dateReSubmitted=2010-08-26; dccRep=1; origAssembly=hg18
      2009-09-09wgEncodeRikenCageK562NucleusLongnonpolyaAln.bam  477M  2008-12-09  dataType=Cage; cell=K562; rnaExtract=longNonPolyA; localization=nucleus; replicate=0; subId=2127; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=Generation 0; dateReSubmitted=2010-08-26; dccRep=1; origAssembly=hg18
      2009-09-09wgEncodeRikenCageK562NucleusLongnonpolyaMinusClusters.bigWig  16M  2008-12-09  dataType=Cage; cell=K562; rnaExtract=longNonPolyA; localization=nucleus; replicate=0; subId=2127; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-08-26; dccRep=1; origAssembly=hg18
      2009-09-09wgEncodeRikenCageK562NucleusLongnonpolyaPlusClusters.bigWig  14M  2008-12-09  dataType=Cage; cell=K562; rnaExtract=longNonPolyA; localization=nucleus; replicate=0; subId=2127; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-08-26; dccRep=1; origAssembly=hg18
      2009-09-09wgEncodeRikenCageK562NucleusLongnonpolyaRawData.csfasta.gz  395M  2008-12-09  dataType=Cage; cell=K562; rnaExtract=longNonPolyA; localization=nucleus; replicate=0; subId=2438; dataVersion=ENCODE Jan 2011 Freeze; dateResubmitted=2010-09-24; grant=Gingeras; lab=RIKEN; view=RawData; type=csfasta; bioRep=Generation 0; dccRep=1; origAssembly=hg18
      2009-09-09wgEncodeRikenCageK562NucleusLongnonpolyaRawData2.csqual.gz  845M  2008-12-09  dataType=Cage; cell=K562; rnaExtract=longNonPolyA; localization=nucleus; replicate=0; subId=2438; dataVersion=ENCODE Jan 2011 Freeze; dateResubmitted=2010-09-24; grant=Gingeras; lab=RIKEN; view=RawData2; type=csqual; bioRep=Generation 0; dccRep=1; origAssembly=hg18
      2009-11-19wgEncodeRikenCageK562PolysomeLongnonpolyaAln.bam.bai  5.4M  2009-02-19  dataType=Cage; cell=K562; rnaExtract=longNonPolyA; localization=polysome; replicate=0; subId=1810; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bai; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-11-19wgEncodeRikenCageK562PolysomeLongnonpolyaAln.bam  400M  2009-02-19  dataType=Cage; cell=K562; rnaExtract=longNonPolyA; localization=polysome; replicate=0; subId=1810; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bam; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-11-19wgEncodeRikenCageK562PolysomeLongnonpolyaMinusClusters.bigWig  11M  2009-02-19  dataType=Cage; cell=K562; rnaExtract=longNonPolyA; localization=polysome; replicate=0; subId=1810; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=MinusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-11-19wgEncodeRikenCageK562PolysomeLongnonpolyaPlusClusters.bigWig  14M  2009-02-19  dataType=Cage; cell=K562; rnaExtract=longNonPolyA; localization=polysome; replicate=0; subId=1810; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=PlusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-11-19wgEncodeRikenCageK562PolysomeLongnonpolyaRawData.fastq.gz  132M  2009-02-19  dataType=Cage; cell=K562; rnaExtract=longNonPolyA; localization=polysome; replicate=0; subId=2433; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=Generation 0; dccRep=1; origAssembly=hg18
      2011-06-21wgEncodeRikenCageK562CellPapAlnRep1.bam.bai  4.9M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J70; subId=2359; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=001WC; dccRep=1; labProtocolId=001WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CellPapAlnRep1.bam  539M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J70; subId=2359; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=001WC; dccRep=1; labProtocolId=001WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CellPapMinusClustersRep1.bigWig  5.5M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J70; subId=2359; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=001WC; dccRep=1; labProtocolId=001WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CellPapPlusClustersRep1.bigWig  5.6M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J70; subId=2359; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=001WC; dccRep=1; labProtocolId=001WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CellPapRawDataRep1.fastq.gz  677M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J70; subId=2359; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=001WC; dccRep=1; labProtocolId=001WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CellPapAlnRep2.bam.bai  4.8M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J71; subId=2362; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=002WC; dccRep=2; labProtocolId=002WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CellPapAlnRep2.bam  577M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J71; subId=2362; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=002WC; dccRep=2; labProtocolId=002WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CellPapMinusClustersRep2.bigWig  5.3M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J71; subId=2362; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=002WC; dccRep=2; labProtocolId=002WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CellPapPlusClustersRep2.bigWig  5.3M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J71; subId=2362; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=002WC; dccRep=2; labProtocolId=002WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CellPapRawDataRep2.fastq.gz  742M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J71; subId=2362; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=002WC; dccRep=2; labProtocolId=002WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CytosolPapAlnRep1.bam.bai  4.6M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cytosol; replicate=1; labExpId=J82; subId=2371; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=001C; dccRep=1; labProtocolId=001C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CytosolPapAlnRep1.bam  626M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cytosol; replicate=1; labExpId=J82; subId=2371; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=001C; dccRep=1; labProtocolId=001C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CytosolPapMinusClustersRep1.bigWig  4.4M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cytosol; replicate=1; labExpId=J82; subId=2371; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=001C; dccRep=1; labProtocolId=001C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CytosolPapPlusClustersRep1.bigWig  4.4M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cytosol; replicate=1; labExpId=J82; subId=2371; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=001C; dccRep=1; labProtocolId=001C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CytosolPapRawDataRep1.fastq.gz  806M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cytosol; replicate=1; labExpId=J82; subId=2371; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=001C; dccRep=1; labProtocolId=001C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CytosolPapAlnRep2.bam.bai  4.3M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J83; subId=2383; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=002C; dccRep=2; labProtocolId=002C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CytosolPapAlnRep2.bam  488M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J83; subId=2383; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=002C; dccRep=2; labProtocolId=002C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CytosolPapMinusClustersRep2.bigWig  3.6M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J83; subId=2383; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=002C; dccRep=2; labProtocolId=002C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CytosolPapPlusClustersRep2.bigWig  3.6M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J83; subId=2383; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=002C; dccRep=2; labProtocolId=002C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562CytosolPapRawDataRep2.fastq.gz  644M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cytosol; replicate=2; labExpId=J83; subId=2383; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=002C; dccRep=2; labProtocolId=002C+cage; origAssembly=hg19
      2009-11-09wgEncodeRikenCageK562CytosolPapAln.bam.bai  5.4M  2009-02-04  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cytosol; replicate=0; subId=1806; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bai; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-11-09wgEncodeRikenCageK562CytosolPapAln.bam  432M  2009-02-04  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cytosol; replicate=0; subId=1806; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bam; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-11-09wgEncodeRikenCageK562CytosolPapMinusClusters.bigWig  11M  2009-02-04  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cytosol; replicate=0; subId=1806; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=MinusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-11-09wgEncodeRikenCageK562CytosolPapPlusClusters.bigWig  11M  2009-02-04  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cytosol; replicate=0; subId=1806; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=PlusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-11-04wgEncodeRikenCageK562CytosolPapRawData.fastq.gz  199M  2009-02-04  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=cytosol; replicate=0; subId=2433; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=Generation 0; dateReubmitted=2010-09-23; dccRep=1; origAssembly=hg18
      2011-06-21wgEncodeRikenCageK562NucleusPapAlnRep1.bam.bai  5.1M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=nucleus; replicate=1; labExpId=J91; subId=2367; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=001N; dccRep=1; labProtocolId=001N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562NucleusPapAlnRep1.bam  620M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=nucleus; replicate=1; labExpId=J91; subId=2367; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=001N; dccRep=1; labProtocolId=001N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562NucleusPapMinusClustersRep1.bigWig  9.3M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=nucleus; replicate=1; labExpId=J91; subId=2367; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=001N; dccRep=1; labProtocolId=001N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562NucleusPapPlusClustersRep1.bigWig  9.9M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=nucleus; replicate=1; labExpId=J91; subId=2367; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=001N; dccRep=1; labProtocolId=001N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562NucleusPapRawDataRep1.fastq.gz  776M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=nucleus; replicate=1; labExpId=J91; subId=2367; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=001N; dccRep=1; labProtocolId=001N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562NucleusPapAlnRep2.bam.bai  5.0M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J92; subId=2358; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=002N; dccRep=2; labProtocolId=002N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562NucleusPapAlnRep2.bam  568M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J92; subId=2358; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=002N; dccRep=2; labProtocolId=002N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562NucleusPapMinusClustersRep2.bigWig  9.4M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J92; subId=2358; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=002N; dccRep=2; labProtocolId=002N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562NucleusPapPlusClustersRep2.bigWig  9.6M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J92; subId=2358; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=002N; dccRep=2; labProtocolId=002N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageK562NucleusPapRawDataRep2.fastq.gz  686M  2010-09-21  dataType=Cage; cell=K562; rnaExtract=longPolyA; localization=nucleus; replicate=2; labExpId=J92; subId=2358; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=002N; dccRep=2; labProtocolId=002N+cage; origAssembly=hg19
      2009-11-19wgEncodeRikenCageK562ChromatinTotalAln.bam.bai  5.6M  2009-02-19  dataType=Cage; cell=K562; rnaExtract=total; localization=chromatin; replicate=0; subId=1804; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bai; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-11-19wgEncodeRikenCageK562ChromatinTotalAln.bam  466M  2009-02-19  dataType=Cage; cell=K562; rnaExtract=total; localization=chromatin; replicate=0; subId=1804; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bam; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-11-19wgEncodeRikenCageK562ChromatinTotalMinusClusters.bigWig  8.2M  2009-02-19  dataType=Cage; cell=K562; rnaExtract=total; localization=chromatin; replicate=0; subId=1804; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=MinusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-11-19wgEncodeRikenCageK562ChromatinTotalPlusClusters.bigWig  8.6M  2009-02-19  dataType=Cage; cell=K562; rnaExtract=total; localization=chromatin; replicate=0; subId=1804; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=PlusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-11-19wgEncodeRikenCageK562ChromatinTotalRawData.fastq.gz  114M  2009-02-19  dataType=Cage; cell=K562; rnaExtract=total; localization=chromatin; replicate=0; subId=2433; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=Generation 0; dccRep=1; origAssembly=hg18
      2009-11-19wgEncodeRikenCageK562NucleoplasmTotalAln.bam.bai  5.6M  2009-02-19  dataType=Cage; cell=K562; rnaExtract=total; localization=nucleoplasm; replicate=0; subId=1808; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bai; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-11-19wgEncodeRikenCageK562NucleoplasmTotalAln.bam  544M  2009-02-19  dataType=Cage; cell=K562; rnaExtract=total; localization=nucleoplasm; replicate=0; subId=1808; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bam; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-11-19wgEncodeRikenCageK562NucleoplasmTotalMinusClusters.bigWig  23M  2009-02-19  dataType=Cage; cell=K562; rnaExtract=total; localization=nucleoplasm; replicate=0; subId=1808; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=MinusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-11-19wgEncodeRikenCageK562NucleoplasmTotalPlusClusters.bigWig  35M  2009-02-19  dataType=Cage; cell=K562; rnaExtract=total; localization=nucleoplasm; replicate=0; subId=1808; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=PlusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2009-11-19wgEncodeRikenCageK562NucleoplasmTotalRawData.fastq.gz  93M  2009-02-19  dataType=Cage; cell=K562; rnaExtract=total; localization=nucleoplasm; replicate=0; subId=2433; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=Generation 0; dccRep=1; origAssembly=hg18
      2011-06-21wgEncodeRikenCageMcf7CellPapAlnRep1.bam.bai  5.4M  2010-09-21  dataType=Cage; cell=MCF-7; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=K07; subId=2365; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=015WC; dccRep=1; labProtocolId=015WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageMcf7CellPapAlnRep1.bam  748M  2010-09-21  dataType=Cage; cell=MCF-7; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=K07; subId=2365; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=015WC; dccRep=1; labProtocolId=015WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageMcf7CellPapMinusClustersRep1.bigWig  11M  2010-09-21  dataType=Cage; cell=MCF-7; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=K07; subId=2365; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=015WC; dccRep=1; labProtocolId=015WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageMcf7CellPapPlusClustersRep1.bigWig  11M  2010-09-21  dataType=Cage; cell=MCF-7; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=K07; subId=2365; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=015WC; dccRep=1; labProtocolId=015WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageMcf7CellPapRawDataRep1.fastq.gz  871M  2010-09-21  dataType=Cage; cell=MCF-7; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=K07; subId=2365; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=015WC; dccRep=1; labProtocolId=015WC+cage; origAssembly=hg19
      2010-10-13wgEncodeRikenCageNhekCytosolLongnonpolyaAln.bam.bai  5.3M  2010-01-14  dataType=Cage; cell=NHEK; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1811; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bai; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageNhekCytosolLongnonpolyaAln.bam  527M  2010-01-14  dataType=Cage; cell=NHEK; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1811; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bam; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageNhekCytosolLongnonpolyaMinusClusters.bigWig  5.0M  2010-01-14  dataType=Cage; cell=NHEK; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1811; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=MinusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageNhekCytosolLongnonpolyaPlusClusters.bigWig  5.0M  2010-01-14  dataType=Cage; cell=NHEK; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=1811; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=PlusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageNhekCytosolLongnonpolyaRawData.fastq.gz  800M  2010-01-14  dataType=Cage; cell=NHEK; rnaExtract=longNonPolyA; localization=cytosol; replicate=0; subId=2433; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=Generation 0; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageNhekNucleusLongnonpolyaAln.bam.bai  5.6M  2010-01-14  dataType=Cage; cell=NHEK; rnaExtract=longNonPolyA; localization=nucleus; replicate=0; subId=1812; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bai; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageNhekNucleusLongnonpolyaAln.bam  1.2G  2010-01-14  dataType=Cage; cell=NHEK; rnaExtract=longNonPolyA; localization=nucleus; replicate=0; subId=1812; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=Delve version 0.9; view=Alignments; type=bam; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageNhekNucleusLongnonpolyaMinusClusters.bigWig  21M  2010-01-14  dataType=Cage; cell=NHEK; rnaExtract=longNonPolyA; localization=nucleus; replicate=0; subId=1812; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=MinusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageNhekNucleusLongnonpolyaPlusClusters.bigWig  22M  2010-01-14  dataType=Cage; cell=NHEK; rnaExtract=longNonPolyA; localization=nucleus; replicate=0; subId=1812; dataVersion=ENCODE June 2010 Freeze; grant=Gingeras; lab=RIKEN; labVersion=bedtools v2.7.1; view=PlusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-06-21; dccRep=1; origAssembly=hg18
      2010-10-13wgEncodeRikenCageNhekNucleusLongnonpolyaRawData.fastq.gz  1.1G  2010-01-14  dataType=Cage; cell=NHEK; rnaExtract=longNonPolyA; localization=nucleus; replicate=0; subId=2433; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=Generation 0; dccRep=1; origAssembly=hg18
      2011-06-21wgEncodeRikenCageNhekCellPapAlnRep1.bam.bai  4.7M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J76; subId=2372; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=007WC; dccRep=1; labProtocolId=007WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekCellPapAlnRep1.bam  587M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J76; subId=2372; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=007WC; dccRep=1; labProtocolId=007WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekCellPapMinusClustersRep1.bigWig  4.5M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J76; subId=2372; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=007WC; dccRep=1; labProtocolId=007WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekCellPapPlusClustersRep1.bigWig  4.5M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J76; subId=2372; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=007WC; dccRep=1; labProtocolId=007WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekCellPapRawDataRep1.fastq.gz  759M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=cell; replicate=1; labExpId=J76; subId=2372; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=007WC; dccRep=1; labProtocolId=007WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekCellPapAlnRep2.bam.bai  4.7M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J77; subId=2361; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=008WC; dccRep=2; labProtocolId=008WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekCellPapAlnRep2.bam  601M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J77; subId=2361; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=008WC; dccRep=2; labProtocolId=008WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekCellPapMinusClustersRep2.bigWig  4.5M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J77; subId=2361; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=008WC; dccRep=2; labProtocolId=008WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekCellPapPlusClustersRep2.bigWig  4.7M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J77; subId=2361; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=008WC; dccRep=2; labProtocolId=008WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekCellPapRawDataRep2.fastq.gz  762M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=cell; replicate=2; labExpId=J77; subId=2361; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=008WC; dccRep=2; labProtocolId=008WC+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekCytosolPapAlnRep3.bam.bai  5.2M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=cytosol; replicate=3; labExpId=K08; subId=2373; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=027C; dccRep=1; labProtocolId=027C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekCytosolPapAlnRep3.bam  681M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=cytosol; replicate=3; labExpId=K08; subId=2373; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=027C; dccRep=1; labProtocolId=027C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekCytosolPapMinusClustersRep3.bigWig  5.8M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=cytosol; replicate=3; labExpId=K08; subId=2373; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=027C; dccRep=1; labProtocolId=027C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekCytosolPapPlusClustersRep3.bigWig  5.6M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=cytosol; replicate=3; labExpId=K08; subId=2373; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=027C; dccRep=1; labProtocolId=027C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekCytosolPapRawDataRep3.fastq.gz  814M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=cytosol; replicate=3; labExpId=K08; subId=2373; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=027C; dccRep=1; labProtocolId=027C+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekNucleusPapAlnRep3.bam.bai  5.3M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=nucleus; replicate=3; labExpId=K09; subId=2382; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bai; bioRep=027N; dccRep=1; labProtocolId=027N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekNucleusPapAlnRep3.bam  500M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=nucleus; replicate=3; labExpId=K09; subId=2382; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=Alignments; type=bam; bioRep=027N; dccRep=1; labProtocolId=027N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekNucleusPapMinusClustersRep3.bigWig  11M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=nucleus; replicate=3; labExpId=K09; subId=2382; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=MinusRawSignal; type=bigWig; bioRep=027N; dccRep=1; labProtocolId=027N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekNucleusPapPlusClustersRep3.bigWig  12M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=nucleus; replicate=3; labExpId=K09; subId=2382; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=PlusRawSignal; type=bigWig; bioRep=027N; dccRep=1; labProtocolId=027N+cage; origAssembly=hg19
      2011-06-21wgEncodeRikenCageNhekNucleusPapRawDataRep3.fastq.gz  831M  2010-09-21  dataType=Cage; cell=NHEK; rnaExtract=longPolyA; localization=nucleus; replicate=3; labExpId=K09; subId=2382; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; view=RawData; type=fastq; bioRep=027N; dccRep=1; labProtocolId=027N+cage; origAssembly=hg19
      2009-09-09wgEncodeRikenCageProstateCellLongnonpolyaAln.bam.bai  5.6M  2008-12-09  dataType=Cage; cell=prostate; rnaExtract=longNonPolyA; localization=cell; replicate=0; subId=1813; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; softwareVersion=Delve version 0.9; view=Alignments; type=bai; bioRep=Generation 0; dateReSubmitted=2010-09-22; dccRep=1; origAssembly=hg18
      2009-09-09wgEncodeRikenCageProstateCellLongnonpolyaAln.bam  625M  2008-12-09  dataType=Cage; cell=prostate; rnaExtract=longNonPolyA; localization=cell; replicate=0; subId=1813; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; softwareVersion=Delve version 0.9; view=Alignments; type=bam; bioRep=Generation 0; dateReSubmitted=2010-09-22; dccRep=1; origAssembly=hg18
      2009-09-09wgEncodeRikenCageProstateCellLongnonpolyaMinusClusters.bigWig  17M  2008-12-09  dataType=Cage; cell=prostate; rnaExtract=longNonPolyA; localization=cell; replicate=0; subId=1813; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; softwareVersion=bedtools v2.7.1; view=MinusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-09-22; dccRep=1; origAssembly=hg18
      2009-09-09wgEncodeRikenCageProstateCellLongnonpolyaPlusClusters.bigWig  17M  2008-12-09  dataType=Cage; cell=prostate; rnaExtract=longNonPolyA; localization=cell; replicate=0; subId=1813; dataVersion=ENCODE Jan 2011 Freeze; grant=Gingeras; lab=RIKEN; softwareVersion=bedtools v2.7.1; view=PlusRawSignal; type=bigWig; bioRep=Generation 0; dateReSubmitted=2010-09-22; dccRep=1; origAssembly=hg18
      2009-09-09wgEncodeRikenCageProstateCellLongnonpolyaRawData.csfasta.gz  340M  2008-12-09  dataType=Cage; cell=prostate; rnaExtract=longNonPolyA; localization=cell; replicate=0; subId=2438; dataVersion=ENCODE Jan 2011 Freeze; dateResubmitted=2010-09-24; grant=Gingeras; lab=RIKEN; view=RawData; type=csfasta; bioRep=Generation 0; dccRep=1; origAssembly=hg18
      2009-09-09wgEncodeRikenCageProstateCellLongnonpolyaRawData2.csqual.gz  758M  2008-12-09  dataType=Cage; cell=prostate; rnaExtract=longNonPolyA; localization=cell; replicate=0; subId=2438; dataVersion=ENCODE Jan 2011 Freeze; dateResubmitted=2010-09-24; grant=Gingeras; lab=RIKEN; view=RawData2; type=csqual; bioRep=Generation 0; dccRep=1; origAssembly=hg18
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