[DIR] Parent Directory

This directory contains data generated by the Crawford/Duke lab as part of the ENCODE project. Further information is available in the Open Chrom Synth track description.

Data is RESTRICTED FROM USE in publication until the restriction date noted for the given data file.

Supporting documents:

  • files.txt is a tab-separated file with the name and metadata for each download.
  • md5sum.txt is a list of the md5sum output for each download.
  • Supplemental materials contains additional files provided by the laboratory related to these downloads.
    • RESTRICTED
    until    		 File Size Submitted dataType cell expId subId type   Additional details
      2011-10-17wgEncodeOpenChromSynthGm12878Pk.bed.gz  7.3M  2011-01-17  CombinedGM1287813233273beddataVersion=ENCODE Jan 2011 Freeze; grant=Crawford; lab=Duke; labVersion=1.0; view=Peaks; dccAccession=wgEncodeEH001323; origAssembly=hg19
      2011-10-17wgEncodeOpenChromSynthH1hescPk.bed.gz  8.0M  2011-01-17  CombinedH1-hESC13243273beddataVersion=ENCODE Jan 2011 Freeze; grant=Crawford; lab=Duke; labVersion=1.0; view=Peaks; dccAccession=wgEncodeEH001324; origAssembly=hg19
      2011-10-17wgEncodeOpenChromSynthHuvecPk.bed.gz  8.8M  2011-01-17  CombinedHUVEC13253273beddataVersion=ENCODE Jan 2011 Freeze; grant=Crawford; lab=Duke; labVersion=1.0; view=Peaks; dccAccession=wgEncodeEH001325; origAssembly=hg19
      2011-10-17wgEncodeOpenChromSynthHelas3Pk.bed.gz  8.0M  2011-01-17  CombinedHeLa-S313263273beddataVersion=ENCODE Jan 2011 Freeze; grant=Crawford; lab=Duke; labVersion=1.0; view=Peaks; dccAccession=wgEncodeEH001326; origAssembly=hg19
      2011-10-17wgEncodeOpenChromSynthHepg2Pk.bed.gz  6.4M  2011-01-17  CombinedHepG213273273beddataVersion=ENCODE Jan 2011 Freeze; grant=Crawford; lab=Duke; labVersion=1.0; view=Peaks; dccAccession=wgEncodeEH001327; origAssembly=hg19
      2011-10-17wgEncodeOpenChromSynthK562Pk.bed.gz  8.6M  2011-01-17  CombinedK56213283273beddataVersion=ENCODE Jan 2011 Freeze; grant=Crawford; lab=Duke; labVersion=1.0; view=Peaks; dccAccession=wgEncodeEH001328; origAssembly=hg19
      2011-10-17wgEncodeOpenChromSynthNhekPk.bed.gz  8.3M  2011-01-17  CombinedNHEK13293273beddataVersion=ENCODE Jan 2011 Freeze; grant=Crawford; lab=Duke; labVersion=1.0; view=Peaks; dccAccession=wgEncodeEH001329; origAssembly=hg19
    7 files