[DIR] Parent Directory

This directory contains data generated by the Myers/HudsonAlpha lab as part of the ENCODE project.

Gene expression data for stem cells can be downloaded from NCBI's GEO (accession number: GSE14966) here

Further information is available in the HAIB Methyl-seq track description.

This is Release 2 of this track. Release notes are included in the track description.

There are two files within this directory that contain information about the downloads:
  • files.txt which is a tab-separated file with the name and metadata for each download.
  • md5sum.txt which is a list of the md5sum output for each download.

    • Data is RESTRICTED FROM USE in publication until the restriction date noted for the given data file.

    RESTRICTED
    until    		  FileSizeSubmitted  Details
      2009-11-10wgEncodeHudsonalphaMethylSeqRegionsRep1Bg02es.bed9.gz  998K  2009-02-10  dataType=MethylSeq; cell=BG02ES; replicate=1; subId=204; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed; dccNotes=GSM378639
      2009-11-10wgEncodeHudsonalphaMethylSeqRegionsRep1Bg02esebd.bed9.gz  998K  2009-02-10  dataType=MethylSeq; cell=BG02ES-EBD; replicate=1; subId=204; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed; dccNotes=GSM378640
      2009-11-10wgEncodeHudsonalphaMethylSeqRegionsRep2Bg02esebd.bed9.gz  998K  2009-02-10  dataType=MethylSeq; cell=BG02ES-EBD; replicate=2; subId=204; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed; dccNotes=GSM378641
      2010-04-15wgEncodeHudsonalphaMethylSeqAlignmentsRep1Gm12878Hpa.tagAlign.gz  184M  2009-07-15  dataType=MethylSeq; cell=GM12878; protocol=PCR1x; restrictionEnzyme=hpa; replicate=1; labExpId=SL296; subId=387; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Alignments; type=tagAlign
      2010-04-15wgEncodeHudsonalphaMethylSeqRawDataRep1Gm12878Hpa.fastq.gz  217M  2009-07-15  dataType=MethylSeq; cell=GM12878; protocol=PCR1x; restrictionEnzyme=hpa; replicate=1; labExpId=SL296; subId=387; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=RawData; type=fastq
      2010-04-15wgEncodeHudsonalphaMethylSeqAlignmentsRep1Gm12878Msp.tagAlign.gz  115M  2009-07-15  dataType=MethylSeq; cell=GM12878; protocol=PCR1x; restrictionEnzyme=msp; replicate=1; labExpId=SL298; subId=387; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Alignments; type=tagAlign
      2010-04-15wgEncodeHudsonalphaMethylSeqRawDataRep1Gm12878Msp.fastq.gz  281M  2009-07-15  dataType=MethylSeq; cell=GM12878; protocol=PCR1x; restrictionEnzyme=msp; replicate=1; labExpId=SL298; subId=387; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=RawData; type=fastq
      2010-04-15wgEncodeHudsonalphaMethylSeqAlignmentsRep2Gm12878Hpa.tagAlign.gz  159M  2009-07-15  dataType=MethylSeq; cell=GM12878; protocol=PCR2x; restrictionEnzyme=hpa; replicate=2; labExpId=SL297; subId=387; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Alignments; type=tagAlign
      2010-04-15wgEncodeHudsonalphaMethylSeqRawDataRep2Gm12878Hpa.fastq.gz  193M  2009-07-15  dataType=MethylSeq; cell=GM12878; protocol=PCR2x; restrictionEnzyme=hpa; replicate=2; labExpId=SL297; subId=387; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=RawData; type=fastq
      2010-04-15wgEncodeHudsonalphaMethylSeqAlignmentsRep2Gm12878Msp.tagAlign.gz  89M  2009-07-15  dataType=MethylSeq; cell=GM12878; protocol=PCR2x; restrictionEnzyme=msp; replicate=2; labExpId=SL299; subId=387; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Alignments; type=tagAlign
      2010-04-15wgEncodeHudsonalphaMethylSeqRawDataRep2Gm12878Msp.fastq.gz  247M  2009-07-15  dataType=MethylSeq; cell=GM12878; protocol=PCR2x; restrictionEnzyme=msp; replicate=2; labExpId=SL299; subId=387; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=RawData; type=fastq
      2010-04-15wgEncodeHudsonalphaMethylSeqRegionsRep1Gm12878.bed9.gz  981K  2009-07-15  dataType=MethylSeq; cell=GM12878; replicate=1; subId=387; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Regions; type=bed
      2010-04-15wgEncodeHudsonalphaMethylSeqRegionsRep2Gm12878.bed9.gz  970K  2009-07-15  dataType=MethylSeq; cell=GM12878; replicate=2; subId=387; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Regions; type=bed
      2010-08-25wgEncodeHudsonalphaMethylSeqAlignmentsRep1Gm12891Hpa.tagAlign.gz  272M  2009-11-25  dataType=MethylSeq; cell=GM12891; protocol=PCR1x; restrictionEnzyme=hpa; replicate=1; labExpId=SL832; subId=794; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Alignments; type=tagAlign
      2010-08-25wgEncodeHudsonalphaMethylSeqRawDataRep1Gm12891Hpa.fastq.gz  835M  2009-11-25  dataType=MethylSeq; cell=GM12891; protocol=PCR1x; restrictionEnzyme=hpa; replicate=1; labExpId=SL832; subId=794; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=RawData; type=fastq
      2010-08-25wgEncodeHudsonalphaMethylSeqAlignmentsRep2Gm12891Hpa.tagAlign.gz  149M  2009-11-25  dataType=MethylSeq; cell=GM12891; protocol=PCR1x; restrictionEnzyme=hpa; replicate=2; labExpId=SL833; subId=794; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Alignments; type=tagAlign
      2010-08-25wgEncodeHudsonalphaMethylSeqRawDataRep2Gm12891Hpa.fastq.gz  887M  2009-11-25  dataType=MethylSeq; cell=GM12891; protocol=PCR1x; restrictionEnzyme=hpa; replicate=2; labExpId=SL833; subId=794; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=RawData; type=fastq
      2010-08-25wgEncodeHudsonalphaMethylSeqAlignmentsRep1Gm12891Msp.tagAlign.gz  241M  2009-11-25  dataType=MethylSeq; cell=GM12891; protocol=PCR1x; restrictionEnzyme=msp; replicate=1; labExpId=SL828; subId=794; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Alignments; type=tagAlign
      2010-08-25wgEncodeHudsonalphaMethylSeqRawDataRep1Gm12891Msp.fastq.gz  873M  2009-11-25  dataType=MethylSeq; cell=GM12891; protocol=PCR1x; restrictionEnzyme=msp; replicate=1; labExpId=SL828; subId=794; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=RawData; type=fastq
      2010-08-25wgEncodeHudsonalphaMethylSeqAlignmentsRep2Gm12891Msp.tagAlign.gz  210M  2009-11-25  dataType=MethylSeq; cell=GM12891; protocol=PCR1x; restrictionEnzyme=msp; replicate=2; labExpId=SL829; subId=794; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Alignments; type=tagAlign
      2010-08-25wgEncodeHudsonalphaMethylSeqRawDataRep2Gm12891Msp.fastq.gz  916M  2009-11-25  dataType=MethylSeq; cell=GM12891; protocol=PCR1x; restrictionEnzyme=msp; replicate=2; labExpId=SL829; subId=794; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=RawData; type=fastq
      2010-08-25wgEncodeHudsonalphaMethylSeqRegionsRep1Gm12891.bed9.gz  905K  2009-11-25  dataType=MethylSeq; cell=GM12891; replicate=1; subId=794; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Regions; type=bed
      2010-08-25wgEncodeHudsonalphaMethylSeqRegionsRep2Gm12891.bed9.gz  941K  2009-11-25  dataType=MethylSeq; cell=GM12891; replicate=2; subId=794; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Regions; type=bed
      2010-08-29wgEncodeHudsonalphaMethylSeqAlignmentsRep1Gm12892Hpa.tagAlign.gz  253M  2009-11-30  dataType=MethylSeq; cell=GM12892; protocol=PCR1x; restrictionEnzyme=hpa; replicate=1; labExpId=SL834; subId=796; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Alignments; type=tagAlign
      2010-08-29wgEncodeHudsonalphaMethylSeqRawDataRep1Gm12892Hpa.fastq.gz  870M  2009-11-30  dataType=MethylSeq; cell=GM12892; protocol=PCR1x; restrictionEnzyme=hpa; replicate=1; labExpId=SL834; subId=796; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=RawData; type=fastq
      2010-08-29wgEncodeHudsonalphaMethylSeqAlignmentsRep2Gm12892Hpa.tagAlign.gz  217M  2009-11-30  dataType=MethylSeq; cell=GM12892; protocol=PCR1x; restrictionEnzyme=hpa; replicate=2; labExpId=SL835; subId=796; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Alignments; type=tagAlign
      2010-08-29wgEncodeHudsonalphaMethylSeqRawDataRep2Gm12892Hpa.fastq.gz  808M  2009-11-30  dataType=MethylSeq; cell=GM12892; protocol=PCR1x; restrictionEnzyme=hpa; replicate=2; labExpId=SL835; subId=796; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=RawData; type=fastq
      2010-08-29wgEncodeHudsonalphaMethylSeqAlignmentsRep1Gm12892Msp.tagAlign.gz  248M  2009-11-30  dataType=MethylSeq; cell=GM12892; protocol=PCR1x; restrictionEnzyme=msp; replicate=1; labExpId=SL830; subId=796; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Alignments; type=tagAlign
      2010-08-29wgEncodeHudsonalphaMethylSeqRawDataRep1Gm12892Msp.fastq.gz  873M  2009-11-30  dataType=MethylSeq; cell=GM12892; protocol=PCR1x; restrictionEnzyme=msp; replicate=1; labExpId=SL830; subId=796; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=RawData; type=fastq
      2010-08-29wgEncodeHudsonalphaMethylSeqAlignmentsRep2Gm12892Msp.tagAlign.gz  260M  2009-11-30  dataType=MethylSeq; cell=GM12892; protocol=PCR1x; restrictionEnzyme=msp; replicate=2; labExpId=SL831; subId=796; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Alignments; type=tagAlign
      2010-08-29wgEncodeHudsonalphaMethylSeqRawDataRep2Gm12892Msp.fastq.gz  834M  2009-11-30  dataType=MethylSeq; cell=GM12892; protocol=PCR1x; restrictionEnzyme=msp; replicate=2; labExpId=SL831; subId=796; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=RawData; type=fastq
      2010-08-29wgEncodeHudsonalphaMethylSeqRegionsRep1Gm12892.bed9.gz  1004K  2009-11-30  dataType=MethylSeq; cell=GM12892; replicate=1; subId=796; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Regions; type=bed
      2010-08-29wgEncodeHudsonalphaMethylSeqRegionsRep2Gm12892.bed9.gz  861K  2009-11-30  dataType=MethylSeq; cell=GM12892; replicate=2; subId=796; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=myerslab; view=Regions; type=bed
      2010-10-07wgEncodeHudsonalphaMethylSeqRegionsRep1H1hesc.bed9.gz  1.2M  2010-01-07  dataType=MethylSeq; cell=H1-hESC; protocol=PCR1x; restrictionEnzyme=None; replicate=1; subId=887; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=SL605; view=Regions; type=bed
      2010-10-07wgEncodeHudsonalphaMethylSeqRegionsRep2H1hesc.bed9.gz  1.2M  2010-01-07  dataType=MethylSeq; cell=H1-hESC; protocol=PCR1x; restrictionEnzyme=None; replicate=2; subId=887; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=SL659; view=Regions; type=bed
      2010-10-07wgEncodeHudsonalphaMethylSeqAlignmentsRep1H1hescHpa.tagAlign.gz  279M  2010-01-07  dataType=MethylSeq; cell=H1-hESC; protocol=PCR1x; restrictionEnzyme=hpa; replicate=1; labExpId=SL605; subId=887; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=SL605; view=Alignments; type=tagAlign
      2010-10-07wgEncodeHudsonalphaMethylSeqRawDataRep1H1hescHpa.fastq.gz  1.2G  2010-01-07  dataType=MethylSeq; cell=H1-hESC; protocol=PCR1x; restrictionEnzyme=hpa; replicate=1; labExpId=SL605; subId=887; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=SL605; view=RawData; type=fastq
      2010-10-07wgEncodeHudsonalphaMethylSeqAlignmentsRep2H1hescHpa.tagAlign.gz  286M  2010-01-07  dataType=MethylSeq; cell=H1-hESC; protocol=PCR1x; restrictionEnzyme=hpa; replicate=2; labExpId=SL659; subId=887; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=SL659; view=Alignments; type=tagAlign
      2010-10-07wgEncodeHudsonalphaMethylSeqRawDataRep2H1hescHpa.fastq.gz  795M  2010-01-07  dataType=MethylSeq; cell=H1-hESC; protocol=PCR1x; restrictionEnzyme=hpa; replicate=2; labExpId=SL659; subId=887; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=SL659; view=RawData; type=fastq
      2010-10-07wgEncodeHudsonalphaMethylSeqAlignmentsRep1H1hescMsp.tagAlign.gz  287M  2010-01-07  dataType=MethylSeq; cell=H1-hESC; protocol=PCR1x; restrictionEnzyme=msp; replicate=1; labExpId=SL604; subId=887; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=SL605; view=Alignments; type=tagAlign
      2010-10-07wgEncodeHudsonalphaMethylSeqRawDataRep1H1hescMsp.fastq.gz  1.8G  2010-01-07  dataType=MethylSeq; cell=H1-hESC; protocol=PCR1x; restrictionEnzyme=msp; replicate=1; labExpId=SL604; subId=887; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=SL605; view=RawData; type=fastq
      2010-10-07wgEncodeHudsonalphaMethylSeqAlignmentsRep2H1hescMsp.tagAlign.gz  262M  2010-01-07  dataType=MethylSeq; cell=H1-hESC; protocol=PCR1x; restrictionEnzyme=msp; replicate=2; labExpId=SL658; subId=887; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=SL659; view=Alignments; type=tagAlign
      2010-10-07wgEncodeHudsonalphaMethylSeqRawDataRep2H1hescMsp.fastq.gz  770M  2010-01-07  dataType=MethylSeq; cell=H1-hESC; protocol=PCR1x; restrictionEnzyme=msp; replicate=2; labExpId=SL658; subId=887; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; softwareVersion=SL659; view=RawData; type=fastq
      2009-11-10wgEncodeHudsonalphaMethylSeqRegionsRep1H9es.bed9.gz  998K  2009-02-10  dataType=MethylSeq; cell=H9ES; replicate=1; subId=204; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed; dccNotes=GSM378632
      2009-11-10wgEncodeHudsonalphaMethylSeqRegionsRep1H9esafpPos.bed9.gz  998K  2009-02-10  dataType=MethylSeq; cell=H9ES-AFP+; replicate=1; subId=204; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed; dccNotes=GSM378634
      2009-11-10wgEncodeHudsonalphaMethylSeqRegionsRep1H9esafpNeg.bed9.gz  998K  2009-02-10  dataType=MethylSeq; cell=H9ES-AFP-; replicate=1; subId=204; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed; dccNotes=GSM378635
      2009-11-10wgEncodeHudsonalphaMethylSeqRegionsRep1H9escm.bed9.gz  998K  2009-02-10  dataType=MethylSeq; cell=H9ES-CM; replicate=1; subId=204; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed; dccNotes=GSM378637
      2009-11-10wgEncodeHudsonalphaMethylSeqRegionsRep1H9ese.bed9.gz  998K  2009-02-10  dataType=MethylSeq; cell=H9ES-E; replicate=1; subId=204; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed; dccNotes=GSM378633
      2009-11-10wgEncodeHudsonalphaMethylSeqRegionsRep1H9eseb.bed9.gz  998K  2009-02-10  dataType=MethylSeq; cell=H9ES-EB; replicate=1; subId=204; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed; dccNotes=GSM378636
      2009-11-10wgEncodeHudsonalphaMethylSeqRegionsRep1H9esebd.bed9.gz  998K  2009-02-10  dataType=MethylSeq; cell=H9ES-EBD; replicate=1; subId=204; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed; dccNotes=GSM378638
      2009-11-10wgEncodeHudsonalphaMethylSeqRegionsRep1Hal.bed9.gz  998K  2009-02-10  dataType=MethylSeq; cell=HAL; replicate=1; subId=204; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed; dccNotes=GSM378644
      2009-11-10wgEncodeHudsonalphaMethylSeqRegionsRep1Hct116.bed9.gz  998K  2009-02-10  dataType=MethylSeq; cell=HCT-116; replicate=1; subId=204; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed; dccNotes=GSM378628
      2009-11-10wgEncodeHudsonalphaMethylSeqRegionsRep2Hct116.bed9.gz  998K  2009-02-10  dataType=MethylSeq; cell=HCT-116; replicate=2; subId=204; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed; dccNotes=GSM378629
      2009-11-10wgEncodeHudsonalphaMethylSeqRegionsRep1Hfl11w.bed9.gz  998K  2009-02-10  dataType=MethylSeq; cell=HFL11W; replicate=1; subId=204; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed; dccNotes=GSM378642
      2009-11-10wgEncodeHudsonalphaMethylSeqRegionsRep1Hfl24w.bed9.gz  998K  2009-02-10  dataType=MethylSeq; cell=HFL24W; replicate=1; subId=204; dataVersion=ENCODE July 2009 Freeze; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed; dccNotes=GSM378643
      2010-10-07wgEncodeHudsonalphaMethylSeqRegionsRep1Helas3Pcr2x.bed9.gz  1.2M  2010-01-07  dataType=MethylSeq; cell=HeLa-S3; protocol=PCR1x; restrictionEnzyme=None; replicate=1; subId=905; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; labVersion=SL577; softwareVersion=MACS; view=Regions; type=bed
      2010-10-07wgEncodeHudsonalphaMethylSeqRegionsRep2Helas3Pcr2x.bed9.gz  1.2M  2010-01-07  dataType=MethylSeq; cell=HeLa-S3; protocol=PCR1x; restrictionEnzyme=None; replicate=2; subId=905; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; labVersion=SL603; softwareVersion=MACS; view=Regions; type=bed
      2010-10-07wgEncodeHudsonalphaMethylSeqAlignmentsRep1Helas3HpaPcr2x.tagAlign.gz  594M  2010-01-07  dataType=MethylSeq; cell=HeLa-S3; protocol=PCR2x; restrictionEnzyme=hpa; replicate=1; labExpId=SL577; subId=905; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; labVersion=SL577; view=Alignments; type=tagAlign
      2010-10-07wgEncodeHudsonalphaMethylSeqRawDataRep1Helas3HpaPcr2x.fastq.gz  2.3G  2010-01-07  dataType=MethylSeq; cell=HeLa-S3; protocol=PCR2x; restrictionEnzyme=hpa; replicate=1; labExpId=SL577; subId=905; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; labVersion=SL577; view=RawData; type=fastq
      2010-10-07wgEncodeHudsonalphaMethylSeqAlignmentsRep2Helas3HpaPcr2x.tagAlign.gz  444M  2010-01-07  dataType=MethylSeq; cell=HeLa-S3; protocol=PCR2x; restrictionEnzyme=hpa; replicate=2; labExpId=SL603; subId=905; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; labVersion=SL603; view=Alignments; type=tagAlign
      2010-10-07wgEncodeHudsonalphaMethylSeqRawDataRep2Helas3HpaPcr2x.fastq.gz  1.9G  2010-01-07  dataType=MethylSeq; cell=HeLa-S3; protocol=PCR2x; restrictionEnzyme=hpa; replicate=2; labExpId=SL603; subId=905; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; labVersion=SL603; view=RawData; type=fastq
      2010-10-07wgEncodeHudsonalphaMethylSeqAlignmentsRep1Helas3MspPcr2x.tagAlign.gz  367M  2010-01-07  dataType=MethylSeq; cell=HeLa-S3; protocol=PCR2x; restrictionEnzyme=msp; replicate=1; labExpId=SL574; subId=905; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; labVersion=SL574; view=Alignments; type=tagAlign
      2010-10-07wgEncodeHudsonalphaMethylSeqRawDataRep1Helas3MspPcr2x.fastq.gz  1.7G  2010-01-07  dataType=MethylSeq; cell=HeLa-S3; protocol=PCR2x; restrictionEnzyme=msp; replicate=1; labExpId=SL574; subId=905; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; labVersion=SL574; view=RawData; type=fastq
      2010-10-07wgEncodeHudsonalphaMethylSeqAlignmentsRep2Helas3MspPcr2x.tagAlign.gz  424M  2010-01-07  dataType=MethylSeq; cell=HeLa-S3; protocol=PCR2x; restrictionEnzyme=msp; replicate=2; labExpId=SL602; subId=905; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; labVersion=SL602; view=Alignments; type=tagAlign
      2010-10-07wgEncodeHudsonalphaMethylSeqRawDataRep2Helas3MspPcr2x.fastq.gz  2.0G  2010-01-07  dataType=MethylSeq; cell=HeLa-S3; protocol=PCR2x; restrictionEnzyme=msp; replicate=2; labExpId=SL602; subId=905; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; labVersion=SL602; view=RawData; type=fastq
      2010-10-07wgEncodeHudsonalphaMethylSeqRegionsRep1Hepg2Pcr2x.bed9.gz  1.2M  2010-01-07  dataType=MethylSeq; cell=HepG2; protocol=PCR1x; restrictionEnzyme=None; replicate=1; subId=905; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; labVersion=SL578; softwareVersion=MACS; view=Regions; type=bed
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      2010-10-07wgEncodeHudsonalphaMethylSeqRawDataRep1Hepg2HpaPcr2x.fastq.gz  2.2G  2010-01-07  dataType=MethylSeq; cell=HepG2; protocol=PCR2x; restrictionEnzyme=hpa; replicate=1; labExpId=SL578; subId=905; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; labVersion=SL578; view=RawData; type=fastq
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      2010-10-07wgEncodeHudsonalphaMethylSeqRawDataRep2Hepg2HpaPcr2x.fastq.gz  2.1G  2010-01-07  dataType=MethylSeq; cell=HepG2; protocol=PCR2x; restrictionEnzyme=hpa; replicate=2; labExpId=SL579; subId=905; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; labVersion=SL579; view=RawData; type=fastq
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      2010-10-07wgEncodeHudsonalphaMethylSeqRawDataRep1Hepg2MspPcr2x.fastq.gz  2.3G  2010-01-07  dataType=MethylSeq; cell=HepG2; protocol=PCR2x; restrictionEnzyme=msp; replicate=1; labExpId=SL575; subId=905; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; labVersion=SL575; view=RawData; type=fastq
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      2010-10-07wgEncodeHudsonalphaMethylSeqRawDataRep2Hepg2MspPcr2x.fastq.gz  2.2G  2010-01-07  dataType=MethylSeq; cell=HepG2; protocol=PCR2x; restrictionEnzyme=msp; replicate=2; labExpId=SL576; subId=905; dataVersion=ENCODE Jan 2010 Freeze; grant=Myers; lab=HudsonAlpha; labVersion=SL576; view=RawData; type=fastq
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