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Parent DirectoryThis directory contains data generated by the Gingeras/Gis lab as part of the ENCODE project. Further information is available in the Gis RnaSeq track description.
Data is RESTRICTED FROM USE in publication until the restriction date noted for the given data file.
| RESTRICTED until | File | Size | Submitted | Details |
|---|---|---|---|---|
| 2010-07-29 | wgEncodeGisRnaSeqAlignmentsRep1Gm12878CytosolLongpolya.tagAlign.gz | 44M | 2009-10-29 | cell=GM12878; dataType=RnaSeq; rnaExtract=longPolyA; localization=cytosol; lab=Gis; type=bigBed; view=Alignments; replicate=1; subId=758; grant=Gingeras; dataVersion=ENCODE Sep 2009 Freeze; tableName=wgEncodeGisRnaSeqAlignmentsRep1Gm12878CytosolLongpolya |
| 2010-07-29 | wgEncodeGisRnaSeqRawDataRep1Gm12878CytosolLongpolya.csfasta.gz | 690M | 2009-10-29 | cell=GM12878; dataType=RnaSeq; rnaExtract=longPolyA; localization=cytosol; lab=Gis; type=csfasta; view=RawData; replicate=1; subId=758; grant=Gingeras; dataVersion=ENCODE Sep 2009 Freeze |
| 2010-07-29 | wgEncodeGisRnaSeqRawData2Rep1Gm12878CytosolLongpolya.csqual.gz | 861M | 2009-10-29 | cell=GM12878; dataType=RnaSeq; rnaExtract=longPolyA; localization=cytosol; lab=Gis; type=csqual; view=RawData2; replicate=1; subId=758; grant=Gingeras; dataVersion=ENCODE Sep 2009 Freeze |
| 2010-07-29 | wgEncodeGisRnaSeqRawData3Rep1H1hescCellLongpolya.fastq.gz | 2.1G | 2009-10-29 | cell=H1-hESC; dataType=RnaSeq; rnaExtract=longPolyA; localization=cell; lab=Gis; type=fastq; view=RawData3; replicate=1; subId=758; grant=Gingeras; dataVersion=ENCODE Sep 2009 Freeze |
| 2010-07-29 | wgEncodeGisRnaSeqSplitAlignRep1H1hescCellLongpolya.pairedTagAlign.gz | 137M | 2009-10-29 | cell=H1-hESC; dataType=RnaSeq; rnaExtract=longPolyA; localization=cell; lab=Gis; type=pairedTagAlign; view=SplitAlign; replicate=1; subId=758; grant=Gingeras; dataVersion=ENCODE Sep 2009 Freeze; tableName=wgEncodeGisRnaSeqSplitAlignRep1H1hescCellLongpolya |
| 2010-07-29 | wgEncodeGisRnaSeqAlignmentsRep1H1hescCellLongpolya.tagAlign.gz | 95M | 2009-10-29 | cell=H1-hESC; dataType=RnaSeq; rnaExtract=longPolyA; localization=cell; lab=Gis; type=tagAlign; view=Alignments; replicate=1; subId=758; grant=Gingeras; dataVersion=ENCODE Sep 2009 Freeze; tableName=wgEncodeGisRnaSeqAlignmentsRep1H1hescCellLongpolya |
| 2010-07-29 | wgEncodeGisRnaSeqSplitAlignRep1K562CytosolLongpolya.pairedTagAlign.gz | 185M | 2009-10-29 | cell=K562; dataType=RnaSeq; rnaExtract=longPolyA; localization=cytosol; lab=Gis; type=bed; view=SplitAlign; replicate=1; subId=758; grant=Gingeras; dataVersion=ENCODE Sep 2009 Freeze; tableName=wgEncodeGisRnaSeqSplitAlignRep1K562CytosolLongpolya |
| 2010-07-29 | wgEncodeGisRnaSeqAlignmentsRep1K562CytosolLongpolya.tagAlign.gz | 110M | 2009-10-29 | cell=K562; dataType=RnaSeq; rnaExtract=longPolyA; localization=cytosol; lab=Gis; type=bigBed; view=Alignments; replicate=1; subId=758; grant=Gingeras; dataVersion=ENCODE Sep 2009 Freeze; tableName=wgEncodeGisRnaSeqAlignmentsRep1K562CytosolLongpolya |
| 2010-07-29 | wgEncodeGisRnaSeqAlignmentsRep2K562CytosolLongpolya.tagAlign.gz | 51M | 2009-10-29 | cell=K562; dataType=RnaSeq; rnaExtract=longPolyA; localization=cytosol; lab=Gis; type=bigBed; view=Alignments; replicate=2; subId=758; grant=Gingeras; dataVersion=ENCODE Sep 2009 Freeze; tableName=wgEncodeGisRnaSeqAlignmentsRep2K562CytosolLongpolya |
| 2010-07-29 | wgEncodeGisRnaSeqRawDataRep2K562CytosolLongpolya.csfasta.gz | 486M | 2009-10-29 | cell=K562; dataType=RnaSeq; rnaExtract=longPolyA; localization=cytosol; lab=Gis; type=csfasta; view=RawData; replicate=2; subId=758; grant=Gingeras; dataVersion=ENCODE Sep 2009 Freeze |
| 2010-07-29 | wgEncodeGisRnaSeqRawData2Rep2K562CytosolLongpolya.csqual.gz | 1.1G | 2009-10-29 | cell=K562; dataType=RnaSeq; rnaExtract=longPolyA; localization=cytosol; lab=Gis; type=csqual; view=RawData2; replicate=2; subId=758; grant=Gingeras; dataVersion=ENCODE Sep 2009 Freeze |
| 2010-07-29 | wgEncodeGisRnaSeqRawData3Rep1K562CytosolLongpolya.fastq.gz | 2.3G | 2009-10-29 | cell=K562; dataType=RnaSeq; rnaExtract=longPolyA; localization=cytosol; lab=Gis; type=fastq; view=RawData3; replicate=1; subId=758; grant=Gingeras; dataVersion=ENCODE Sep 2009 Freeze |