# generated with encodeMkChangeNotes 0.9
# edit to add 12 signal tables not in downloads
This is a release1 of the "ENCODE wgEncodeGisRnaSeq"
The composite track is wgEncodeGisRnaSeq

Categories of tables and files('):
A) Untouched - are on public browser and should remain
B) Deprecated - are currently on RR but will no longer be needed and should not be referenced by the public site.
   NOTE: NO FILES SHOULD BE REMOVED from the downloads directory on hgdownloads (RR).  
   This list is provided for completeness. Any files marked here as in gbdb may be eliminated.
C) New - are only currently on test but will need to be pushed to the RR.
D) Additional items of note

Summary total counts for release1 (new+untouched):
    Tables: 18
    Files: 15
    Gbdbs: 4

A) Untouched Tables (0):

A') Untouched Files (0 downloadables, 0 gbdbs):

B) Deprecated tables (0):

B') Deprecated files (0 downloadables, 0 gbdbs):

C) New tables (18):
wgEncodeGisRnaSeqAlignmentsRep1Gm12878CytosolLongpolya
wgEncodeGisRnaSeqAlignmentsRep1H1hescCellLongpolya
wgEncodeGisRnaSeqAlignmentsRep1K562CytosolLongpolya
wgEncodeGisRnaSeqAlignmentsRep2K562CytosolLongpolya
wgEncodeGisRnaSeqSplitAlignRep1H1hescCellLongpolya
wgEncodeGisRnaSeqSplitAlignRep1K562CytosolLongpolya
wgEncodeGisRnaSeqAllRawSignalRep1Gm12878CytosolLongpolya
wgEncodeGisRnaSeqAllRawSignalRep1H1hescCellLongpolya
wgEncodeGisRnaSeqAllRawSignalRep1K562CytosolLongpolya
wgEncodeGisRnaSeqAllRawSignalRep2K562CytosolLongpolya
wgEncodeGisRnaSeqMinusRawSignalRep1Gm12878CytosolLongpolya
wgEncodeGisRnaSeqMinusRawSignalRep1H1hescCellLongpolya
wgEncodeGisRnaSeqMinusRawSignalRep1K562CytosolLongpolya
wgEncodeGisRnaSeqMinusRawSignalRep2K562CytosolLongpolya
wgEncodeGisRnaSeqPlusRawSignalRep1Gm12878CytosolLongpolya
wgEncodeGisRnaSeqPlusRawSignalRep1H1hescCellLongpolya
wgEncodeGisRnaSeqPlusRawSignalRep1K562CytosolLongpolya
wgEncodeGisRnaSeqPlusRawSignalRep2K562CytosolLongpolya

C') New files (12 downloadables, 4 gbdbs):
    current location on alpha:
      /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/release1/
    NOT on RR but must be placed in:
      /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/

/usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/release1/wgEncodeGisRnaSeqAlignmentsRep1Gm12878CytosolLongpolya.tagAlign.gz
/usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/release1/wgEncodeGisRnaSeqAlignmentsRep1H1hescCellLongpolya.tagAlign.gz
/usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/release1/wgEncodeGisRnaSeqAlignmentsRep1K562CytosolLongpolya.tagAlign.gz
/usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/release1/wgEncodeGisRnaSeqAlignmentsRep2K562CytosolLongpolya.tagAlign.gz
/usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/release1/wgEncodeGisRnaSeqRawData2Rep1Gm12878CytosolLongpolya.csqual.gz
/usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/release1/wgEncodeGisRnaSeqRawData2Rep2K562CytosolLongpolya.csqual.gz
/usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/release1/wgEncodeGisRnaSeqRawData3Rep1H1hescCellLongpolya.fastq.gz
/usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/release1/wgEncodeGisRnaSeqRawData3Rep1K562CytosolLongpolya.fastq.gz
/usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/release1/wgEncodeGisRnaSeqRawDataRep1Gm12878CytosolLongpolya.csfasta.gz
/usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/release1/wgEncodeGisRnaSeqRawDataRep2K562CytosolLongpolya.csfasta.gz
/usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/release1/wgEncodeGisRnaSeqSplitAlignRep1H1hescCellLongpolya.pairedTagAlign.gz
/usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/release1/wgEncodeGisRnaSeqSplitAlignRep1K562CytosolLongpolya.pairedTagAlign.gz

/gbdb/hg18/bbi/wgEncodeGisRnaSeqAlignmentsRep1Gm12878CytosolLongpolya.bb
/gbdb/hg18/bbi/wgEncodeGisRnaSeqAlignmentsRep1H1hescCytosolLongpolya.bb
/gbdb/hg18/bbi/wgEncodeGisRnaSeqAlignmentsRep1K562CytosolLongpolya.bb
/gbdb/hg18/bbi/wgEncodeGisRnaSeqAlignmentsRep2K562CytosolLongpolya.bb

D) Additional items:
    current location on alpha:
      /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/release1/
    should be placed on the RR in (overwritting any existing copy):
      /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/

/usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/release1/index.html
/usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/release1/files.txt
/usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeGisRnaSeq/release1/md5sum.txt