This directory contains reciprocal-best netted chains for galGal5-aquChr2. - galGal5.aquChr2.rbest.net.gz: galGal5-referenced recip.best net to aquChr2. - galGal5.aquChr2.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from galGal5 to aquChr2 through the recip.best net. - aquChr2.galGal5.rbest.net.gz: aquChr2-referenced recip.best net. - aquChr2.galGal5.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/galGal5.aquChr2.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html