This directory contains a dump of the UCSC genome annotation database for the Oct. 2004 assembly of the fugu genome (fr2, JGI V4.0). The annotations were generated by UCSC and collaborators worldwide. This assembly was produced by the US DOE Joint Genome Institute (JGI). For more information on the fugu genome, see the project website: http://genome.jgi-psf.org/Takru4/Takru4.info.html http://www.fugu-sg.org/ Files included in this directory (updated nightly): - *.sql files: the MySQL commands used to create the tables - *.txt.gz files: the database tables in a tab-delimited format compressed with gzip. To see descriptions of the tables underlying Genome Browser annotation tracks, select the table in the Table Browser: http://genome.ucsc.edu/cgi-bin/hgTables?db=fr2 and click the "describe table schema" button. There is also a "view table schema" link on the configuration page for each track. --------------------------------------------------------------- If you plan to download a large file or multiple files from this directory, we recommend you use ftp rather than downloading the files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to the directory goldenPath/fr2/database/. To download multiple files, use the "mget" command: mget ... - or - mget -a (to download all the files in the directory) 1. These data have been freely provided by the JGI for use in the UCSC Genome Browser.