This directory contains reciprocal-best netted chains for susScr11-GCF_002263795.3.

 - susScr11.GCF_002263795.3.rbest.net.gz: susScr11-referenced recip.best net to GCF_002263795.3.
 - susScr11.GCF_002263795.3.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from susScr11 to GCF_002263795.3 through the recip.best net.

 - GCF_002263795.3.susScr11.rbest.net.gz: GCF_002263795.3-referenced recip.best net.
 - GCF_002263795.3.susScr11.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/susScr11.GCF_002263795.3.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html