This directory contains reciprocal-best netted chains for dm6-droSim2. - dm6.droSim2.rbest.net.gz: dm6-referenced recip.best net to droSim2. - dm6.droSim2.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from dm6 to droSim2 through the recip.best net. - droSim2.dm6.rbest.net.gz: droSim2-referenced recip.best net. - droSim2.dm6.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/dm6.droSim2.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html