This directory contains reciprocal-best netted chains for ce11-caeSp51. - ce11.caeSp51.rbest.net.gz: ce11-referenced recip.best net to caeSp51. - ce11.caeSp51.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from ce11 to caeSp51 through the recip.best net. - caeSp51.ce11.rbest.net.gz: caeSp51-referenced recip.best net. - caeSp51.ce11.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/*.ce11.caeSp51.net.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html