This directory contains a dump of the UCSC genome annotation database for the Jan. 2007 assembly of the C. brenneri genome (caePb1, Washington University School of Medicine GSC Caenorhabditis n. sp. PB2801). The annotations were generated by UCSC and collaborators worldwide. Various strains of this Caenorhabditis are named: Caenorhabditis n. sp. 4. PB2801 LKC28, CB5161, SB129, SB280 This assembly was produced by the Genome Sequencing Center at the Washington University School of Medicine in St. Louis. For more information on the C. brenneri genome, see the project website: http://genome.wustl.edu/genome.cgi?GENOME=Caenorhabditis+n.+sp.+PB2801 Files included in this directory (updated nightly): - *.sql files: the MySQL commands used to create the tables - *.txt.gz files: the database tables in a tab-delimited format compressed with gzip. See http://genome.ucsc.edu/goldenPath/gbdDescriptions.html for descriptions of the tables. --------------------------------------------------------------- If you plan to download a large file or multiple files from this directory, we recommend you use ftp rather than downloading the files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to the directory goldenPath/caePb1/database/. To download multiple files, use the "mget" command: mget ... - or - mget -a (to download all the files in the directory) The C. brenneri sequence is made freely available to the community by the Genome Sequencing Center, Washington University School of Medicine, with the following understanding: 1. The data may be freely downloaded, used in analyses, and repackaged in databases. 2. Users are free to use the data in scientific papers analyzing these data if the providers of these data are properly acknowledged. See http://genome.ucsc.edu/goldenPath/credits.html for credit information. 3. See also: http://genome.wustl.edu/data.cgi 4. Any redistribution of the data should carry this notice.