This directory contains reciprocal-best netted chains for GCF_000188115.2-GCA_000188115.5.

 - GCF_000188115.2.GCA_000188115.5.rbest.net.gz: GCF_000188115.2-referenced recip.best net to GCA_000188115.5.
 - GCF_000188115.2.GCA_000188115.5.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from GCF_000188115.2 to GCA_000188115.5 through the recip.best net.

 - GCA_000188115.5.GCF_000188115.2.rbest.net.gz: GCA_000188115.5-referenced recip.best net.
 - GCA_000188115.5.GCF_000188115.2.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/GCF_000188115.2.GCA_000188115.5.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html