0 JADCQM020000065.1 1082 1293 CM019940.2 76743645 76743858 + 9708
TTATGATCTGACCAGGAATTGCTGAAGAGAGCAACGTCAGCTACCTGAGCTCCAGCAAAGTCCTGTGACCCCACTAACAACTG-TTAACAAGCCTCTGAAATGTGGCTCCTGCATTAATTAACCCAAATGGCAACACTTTACATTC-ATAAAGTCCCAAATCAGGTATGAAGGTGGATTTTTTTCTGTGCTTCCCTTTCTAAGGGGATTTgtca
TTATGATCTGACCAGGAATTGCTGAAAATTGCAATATTGGCAATGTATGCCCATGGAAAGTACTGCAACACAGTTAAAACCTGATTAATGAGCATCTGAAATATGATTTCTGCATTAATTAATCCCAAAAGTAACACTTTAATCTCAAAAAAGTCCCAAATCAATAATGAACAGAGGTTTTTTTCTGAGCTTTGCTGTTCagggggatttgcca

1 JADCQM020000065.1 1812 2518 CM019940.2 76743870 76744575 + 32066
 
 

2 JADCQM020000065.1 2849 2855 CM019935.3 255223301 255223307 - 466
GCAGGGC
GGAGGGC

3 JADCQM020000065.1 3328 3329 CM019935.3 255223975 255223976 - -23
tc
ta

4 JADCQM020000065.1 3996 4004 CM019939.2 8681024 8681032 + 501
ttttagtgt
tttcagagt

5 JADCQM020000065.1 5795 5801 CM019938.2 38724178 38724184 - 423
TTAATAA
TTATTAA

6 JADCQM020000065.1 13537 13537 CM019948.2 7818924 7818924 - 91
T
t

7 JADCQM020000065.1 14683 14702 CM019938.2 65555271 65555275 + -600
TTTGGACTCACCATACTTAG
T---------------TTAT

8 JADCQM020000065.1 23698 23698 CM019947.2 6069006 6069006 - 100
C
c

9 JADCQM020000065.1 34212 34228 CM019943.2 55607847 55607863 + 1646
gaagagccgggagtgca
gaagagccgggagtgca

10 JADCQM020000065.1 34611 34612 CM019943.2 55608272 55608273 + 191
tg
tg

11 JADCQM020000065.1 34896 34896 CM019943.2 55608557 55608557 + 91
a
a

12 JADCQM020000065.1 35184 35184 CM019943.2 55608785 55608785 + -31
g
a

13 JADCQM020000065.1 35390 35392 CM019943.2 55608980 55608982 + 282
gaa
gaa

14 JADCQM020000065.1 35413 35607 CM019943.2 55609039 55609201 + 10707
ttcccgattggacccccctgccagccccgtggcccatcgagacgggcatgcagggatcagagccccgccgcggcacccgtccctctggcaccgcgccacccgactcagcactcggcccttgggacaatggcgaagggagaactgcagccccaaatgggccaagagagg-aaaaaacaaaaaccgcctcccgggggc
cccccaattggacccccctgccagcgccgtggcccatcgagacagggaggcagagatcag---------------------------------cgccacctgcctcagcactcagccctagggacagtggcagagggagaactgcagccccagatgggccaggagagggaaaaaaaaaaaaccacctcccggggtc

15 JADCQM020000065.1 36545 36551 CM019943.2 55610127 55610133 + 429
agcttcc
ggctccc

16 JADCQM020000065.1 36829 36831 CM019943.2 55610407 55610409 + 291
agg
agg

17 JADCQM020000065.1 38485 38488 CM019943.2 55612009 55612012 + 120
CAAT
TAAC

18 JADCQM020000065.1 38677 38683 CM019943.2 55612187 55612193 + 682
GGAGAGG
GGAGAGG

19 JADCQM020000065.1 38824 38826 CM019943.2 55612336 55612338 + 38
tgg
CGA

20 JADCQM020000065.1 39312 39312 CM019943.2 55612810 55612810 + 91
t
t

21 JADCQM020000065.1 39344 39344 CM019943.2 55612842 55612842 + 100
c
c

22 JADCQM020000065.1 39519 39528 CM019942.2 40633061 40633069 + 229
cctgcttccc
cctgctt-ca

23 JADCQM020000065.1 39600 39604 CM019942.2 40633136 40633140 + 473
tagtc
tagtc

24 JADCQM020000065.1 40435 40435 CM019935.3 144139724 144139724 - 91
t
t

25 JADCQM020000065.1 40549 40775 CM019935.3 140002981 140003201 - -990
CCAgga----------ctggattaacactcc-----------tgtgggcctgggg-ctattagattttatggggcccctgggggtttggaatgcgggaatgggctca--gggctacggcaggggattgaggtgtgagagggggtgggctctggggtgg---ggcca--------gagatgggatgggggttgggtgcggcaggaggtttggggtgaaggctctgggtgggagtttgggtgcaggagagagttcagggctggg
tcagaggagtgaagttttggaataaccttccaagggaagcagtgggggcaaaagatctatctggttttaagattctactcgataagtttatggaggagatggtataatgggattttggtaagtaattgatctttaaata---------ttcagggtaaataggccaaatcccctgagatgggatattagatggatg---------------------ggatctgagt-----------tactatagaaaattctttcctggg

26 JADCQM020000065.1 40871 41033 CM019935.3 140003254 140003348 - -593
tgtggggtgcaggctctggccaggaggcgcttgcctcgggtggctcctggtcggcagaacagcagagctaaggcaggatcccgcttgccctggctctgcgctggtctgctcctcgaggtggccagcatgtctggcggaggggcctggctgatctgcatggtgc
tttggggt-----------cgggaaggaattttcctc----------------------caggacagattggagaggccctttttcgccttc-ctctgt------------------------agcatg----------gggcatggttgacttgagggaggc

27 JADCQM020000065.1 41169 41321 CM019935.3 140003420 140003526 - 113
atgggggttagggggcactgaggctcggggaccggtgtctggcctgcg----gcatggattcttgccgtgggctggatgaaaagaagcagcaggctgcatccagcctgtggggccccccttagcctcggggctctgggctgcagcccctaaagcccc
ataggagtgggtggg---tgagattctg-----------tggcctgcgctgtgcaggaggtc-------ggactagatgatcagaat-----------------------ggtcccttctgaccttcgtatctatg------aatctatgaagtcat

28 JADCQM020000065.1 45953 45955 CM019962.2 1671695 1671697 + 291
TCC
tcc

29 JADCQM020000065.1 46932 46933 CM019935.3 261833146 261833147 - -62
GA
AG

30 JADCQM020000065.1 48709 48722 CM019935.3 255223223 255223231 - 98
ttttctgcttcggg
t-----gcttgggG

31 JADCQM020000065.1 48897 48982 CM019935.3 255223284 255223438 - 3472
AGCCGCCTGCAGGTGCC---------------------------------------------------------------------ACAGGGTGGAGGCCCCCCAGCGCCGTGGCCGGGGCTGGGCAAAGCGGCCCGAGCCGCCCAGGGACAGCG
AGCTGCCTGCCGGTGCTGGAGGGCAGCTGCCCCCCAGCACCGCAGCTGGGGCTGGGCGAAGCAGCCCAAGCTGTCCAGGGGCTGCGGCAGGGTGGCTGCCCCCCAGTGCCGCAGCCAGGGCTGGGCGAAGCGGCTCGAGCCACCCGGGGgctgca

32 JADCQM020000065.1 49010 49012 CM019935.3 255223466 255223468 - 169
gcG
gTG

33 JADCQM020000065.1 49323 49337 CM019935.3 255223790 255223799 - -46
CACTTGTGGGGGGAG
cat-----ggggggc

34 JADCQM020000065.1 49449 49611 CM019935.3 255223977 255224149 - 12887
aggtttcagagtagcagccgtgttagtctgtattcgcaaaaagaaaaggaggacttgtggcaccttagagacgaacaaacttatttgagcataagttttcgtgag----------ctacatccgatgaagtgagctgtagctcgcgaaaacttatgctcaaataaatttgttc
atgtttcagagtagcaaccatgttagtctgtattcgcaaaaagaaaaggagtacttgtggcaccttagagactaacaaatttatttgagcataagctttcgtgaggtacagctcacttcatccgatgaagtgagctgtagctcacgaaagcttatgctcaaataaatttgttg

35 JADCQM020000065.1 57202 57204 CM019944.2 38129738 38129740 - -137
CAA
CCT

36 JADCQM020000065.1 57242 57248 CM019944.2 38129776 38129782 - 1
CACACTC
CCCTCCT

37 JADCQM020000065.1 57319 57333 CM019944.2 38129853 38129856 - -348
TCAAACACACCGGCT
TC-----------CT

38 JADCQM020000065.1 61658 61659 CM019940.2 130085999 130086000 - 69
AC
GC

39 JADCQM020000065.1 61836 61837 CM019940.2 130086141 130086142 - -14
CA
CC

40 JADCQM020000065.1 62024 62024 CM019940.2 130086334 130086334 - 100
c
C

41 JADCQM020000065.1 62131 62132 CM019940.2 130086424 130086425 - 191
CT
CT

42 JADCQM020000065.1 64579 64800 CM019939.2 136366716 136366845 + -2278
ctgcatctgcctcctgacccccagaaccccggaatgactccagtccggctttgacttttgacctgcagct---ggactctgactacgctactgatttggct--tctccatggactctgacctcagttctgacccacagtctgtccccagacccccgtttcagcaccactctcagcccgatcccgactaccactccaaccaccaggcctgactgcctgaaccagagcc
ctgtattttccacc-----------------gaatgcatccgatgaag----------tgagctgtagctcacgaaagctta-tgctcaaataaatttgttagtctctaagg----------------------------tgccacaagtcctcctttt--------ctttttg-cgaatacagactaacac--------------------------------ggc

43 JADCQM020000065.1 65602 65602 CM019940.2 76744680 76744680 + -31
g
a

44 JADCQM020000065.1 72787 72794 CM019935.3 144137990 144137997 - 419
CAGAAGAA
AAGGAGAA

45 JADCQM020000065.1 73409 73409 CM019935.3 144139452 144139452 - 100
c
C

46 JADCQM020000065.1 73421 73724 CM019935.3 144139464 144139621 - 7163
agctgcaggagggaaggggaggggcagaggagccgacccattgctcacacaggtttcagagtaacagccgtgttagtctgtattcgcaaaaagaaaaggaggacttgtggcaccttagagactaaccaatttatttgagcatgagctttcgtgagctacagctcacttcatcggatgcatactgtggaaattgcagaagacattatatacacagagaccatgaaacaatacctcctcccaccccactctcctgctggtaatagcttatctaaagtgatcatcaagttgggccatttccagaaaa
tgct----------------------------------------------aggtttcagagtagcagccgtgttagtctgtattcacaaaaagaaaaggagtacttgtggaaccttagagactaacaaatttatttgagcataagctttcgtgagctacagctcacttcatcggatgcatttggtggaaa------------------------------------aat----------------------------------------------------------------tttccaccaaa

47 JADCQM020000065.1 73845 73946 CM019935.3 144139622 144139723 - 8093
aatttccacagtatgcatctgatgaagtgagctgtggctcacgaaagctcatgctcaaataaattggttagtctctaaggtgccacaagtcctccttttctt
attttccaccaaatgcatccgatgaagtgagctgtagctcacgaaagcttatgctcaaataaatttgttagtctctaaggtgccacaagtactccttttctt

48 JADCQM020000065.1 85439 85443 CM019940.2 85214398 85214402 - -116
TCTCC
ACCTT

49 JADCQM020000065.1 85457 85478 CM019940.2 85214416 85214437 - 242
CCAACACTCCCACCCCCCCAAA
TGTCCCCTGTTCCCCACCCAAA

50 JADCQM020000065.1 85508 85757 CM019940.2 85214464 85214736 - 2487
TAAACACAAGCACTCCCCACCATGCCACCCATCCTCAGACCCCCTTTCCCCCAATCAAGAACAAAGGTGCTCCATACCCCTCCCTTCCCA----CTCCCCTCCCCCTCACATCCCTCAAACACGGACTCCTCT--------------CCCACTGATGCCCCATGTGCTCCCTCC---ACTCATGCCCTCAC----------ACACACGATCCCC---TCCCCAGTACAAATATCCTCCCCTCCCCCTTCACCTCCCTTCACACACAGGCTTCCCTCCCACTTCT
CCAGCCC---CTTCCCTCACCTTCAACCTCATTCACTGTCCCCCTGTTCCCCACCCAGCCCCTCTGTCACCCCACTTCCATCCTCCCCCAGCCCCTTCCCTCACCTTCAC---CCTCATTCACTGTCCCCCCTGTTCCCCACCCAGCCCCTCTGTCACCCCACTTCCTCCTCCCCCAGCCCCTTCCCTCACCTTCACCCTCATTCACTGTCCCCCTGTTCCCCACCCAG-----CCCCTCTGTCACCCCACTTCCATCCTCCCCGAGCCCCTTCCCTCACCTTC

51 JADCQM020000065.1 85769 85771 CM019940.2 85214756 85214758 - 282
TGT
TGT

52 JADCQM020000065.1 85780 85780 CM019940.2 85214770 85214770 - 100
C
C

53 JADCQM020000065.1 91208 91393 CM019935.3 20999305 20999448 + 3177
CATCCTTCCCCTCCCTTCCCATTATTCCCTCCTCCCTCTTTGGCATCCCCACCTCTCCCCATATCATCTGCTCCCTACTTCTATGCCCCCTCCCCA-CCCTCTGTCCCCTTCTCCCACTCCCTGTGCAAACACTGATAGCATTACAATACAACAAATCCATCTCCCTTCACCCCTCCCCAGCCTGTC
CACCCTCCCCCTTCCTTC-----ACTCTCCCCTGCCTGTC---CCTCCATTCCCTGCCCCAC-TCACCCTCCCCCTTCCTTCACGCTCCCTGCCTGTCCCTCCATTCCCTGC-CCCACTCACC--------------------------------CTCCCCCTTCCTTCA-CTCTCCCCTGCCTGTC

54 JADCQM020000065.1 93052 93052 CM019935.3 20999453 20999453 + 100
C
C

55 JADCQM020000065.1 93069 93075 CM019942.2 105670115 105670121 + 103
CTTTGCA
CCTTCCT

56 JADCQM020000065.1 93357 93362 CM019935.3 20999754 20999759 + 237
CCTGTA
CCTTCA

57 JADCQM020000065.1 93363 93749 CM019941.2 33472670 33472866 + -2795
TCCTCCCCCAAGATCAGGTAGAAGAACTTCAGACTGAATTGGGAAATTTAGAGAAGCAAAAATACATCTGGAAAACCAAATCTCCCAGCTCTGCATTGAATCGGGGAGAGAAATGAAAACTAATCGGACCAGCAGGATCCAAGGAGAAAAGAAAAGGCAGGTCTAATGTAGTGCACTGAGCAGTAACTCTGCCCCCCCTCTCTCCGCCCCCAGGGTCTGTCAGCCTCTCTTCAGGATCTCAGCATTTGCTCCTGCCACTTGCTGAGTGACCCTCTTCTTCATGTCCCCAGCCAGCAGGGGCTCATCCCCACTTTGCCCCTCCTTTCTCTAAGCCCCATGTCACAGCACCTGCTCTTGAAGCAGGGCTTCCACCTCCACTAATGGGCG
TCTTACCC-------------------------------------------------------------------CTACAGCTCCCCGCTCCCC-----------------------------------------------------------------------------------------CATCCCTGCACCCCCTCCTCTTACCCCCACTGCTCCCCATCC------CAGCATCCCTGCACCCCCTCCTCTTACCCCCACAGC-ACCCCCTCCCCCATCCCTGCACCC-------------CCTCCTCTTACCCCTACAGCTCCCCGCTCCCCCATCCCTGCACCCCCTCT-----------TCTTACCCCCACCGCT---CC

58 JADCQM020000065.1 93831 93943 CM019941.2 33472915 33472990 + -598
GCCCCTGTCGCTCCTCAATGGCCCCTTGTGCCTCAAGCAAAGAGCCCACGGACGCCCACTCTAGCTACTAATTCACAGTCATCTGGGCACGTTCTCAGTTAATAGATAGACCT
ATCCCTGCACCCCCT--------CCTCTTACC------------CCCACCGCTCCCCATCCCAG---------------CATCCCTGCACCCCCTC--TTCTTACCCCCACCG

59 JADCQM020000065.1 93991 94030 CM019941.2 33473027 33473067 + 707
AGC-CTCTGTTTCCAGTCAAAGGACCCCCTACTTCTCTCCT
AGCACCCCCTCCCCCATCCCTGCACCCCCTCCTCTTACCCT

60 JADCQM020000065.1 94052 94130 CM019941.2 33473086 33473119 + -1337
AGGCAGGTCTGGGGGGATGGAGTTCGTAGGAGGGGGCACCATcacctcctgagcaccccatcgtggtgtattggtgcta
A---------------------TCCCT--------GCACCCCCTCCTCTT----ACCCCCAC------------TGCTC

61 JADCQM020000065.1 94146 94200 CM019941.2 33473136 33473142 + -1372
tgcaatgaggtcacttcaacagcccagacaaggagaagccaataGAATAAAAGCC
TGCAC------------------------------------------------CC

62 JADCQM020000065.1 94231 94241 CM019935.3 20999760 20999775 + 392
CTCTCCCCC-----TC
CTCTCCCCTGCCTGTC

63 JADCQM020000065.1 94279 94283 CM019935.3 20999813 20999817 + 63
AAAGC
CACGC

64 JADCQM020000065.1 94337 94339 CM019935.3 20999871 20999873 + 291
CTC
CTC

65 JADCQM020000065.1 94360 94360 CM019935.3 20999906 20999906 + 100
C
C

66 JADCQM020000065.1 94379 94427 CM019935.3 20999921 20999968 + 1588
CACACTCTCCACAGCCTCACACACACTCCCCTCCTCCTCACACCCTCTC
TTCACTCTCC-CTGCCTGTCCCTCCATTCCCTGCTCCACTCACCCTCTC

67 JADCQM020000065.1 97296 97296 CM019943.2 86249779 86249779 + -31
C
T

68 JADCQM020000065.1 103930 103930 CM019941.2 23517218 23517218 - -31
T
c

69 JADCQM020000065.1 104607 104609 CM019941.2 23517591 23517593 - -54
aga
aac

70 JADCQM020000065.1 108364 108371 CM019956.3 10419260 10419267 + 184
tcccttcc
GTCCTCTC

71 JADCQM020000065.1 108414 108414 CM019956.3 10419312 10419312 + 91
T
T

72 JADCQM020000065.1 108454 108464 CM019956.3 10419347 10419355 + -147
G-CCTCTATCCT
GTCCTCT---CT

73 JADCQM020000065.1 115536 116200 CM019940.2 5997858 5998343 + 1411
 
 

74 JADCQM020000065.1 116898 116898 CM019940.2 5998929 5998929 + 91
A
A

75 JADCQM020000065.1 131028 131037 CM019938.2 1567438 1567444 - 174
CTGTTGTTTC
CTGTT---TC

76 JADCQM020000065.1 132033 132033 CM019962.2 4021200 4021200 + 91
a
a

77 JADCQM020000065.1 132370 132407 CM019962.2 4021530 4021569 + 1446
ttatatatacatttttttaaatatt--ttaaactgcttta
ttatgcacatttttttcttaacattccttacactgattta

78 JADCQM020000065.1 133252 133252 CM019962.2 4022441 4022441 + 91
T
T

79 JADCQM020000065.1 133950 133950 CM019938.2 1567979 1567979 - 91
T
T

80 JADCQM020000065.1 134313 134314 CM019938.2 1568212 1568213 - 191
AG
AG

81 JADCQM020000065.1 134376 134376 CM019938.2 1568287 1568287 - -31
A
G

82 JADCQM020000065.1 134506 134521 CM019938.2 1568395 1568410 - 1379
CTAGTGATGTAAAGGA
CTAGTGATATAAAGGA

