Schema for HPRC Chains v0.1 - HPRC Chains version 0.1 prototype April 2022
  Database: hg38    Primary Table: NA213092Chain Data last updated: 2022-04-28
Big Bed File Download: /gbdb/hg38/hprcChain/NA21309#2.bb
Item Count: 37,022
Format description: bigChain pairwise alignment
fieldexampledescription
chromchr1Reference sequence chromosome or scaffold
chromStart161440058Start position in chromosome
chromEnd231793224End position in chromosome
name1Name or ID of item, ideally both human readable and unique
score1000Score (0-1000)
strand++ or - for strand
tSize248956422size of target sequence
qNameJAHEPB010000048.1name of query sequence
qSize70476909size of query sequence
qStart40238start of alignment on query sequence
qEnd70468989end of alignment on query sequence
chainScore6611107195score from chain

Sample Rows
 
chromchromStartchromEndnamescorestrandtSizeqNameqSizeqStartqEndchainScore
chr116144005823179322411000+248956422JAHEPB010000048.17047690940238704689896611107195
chr120605251820605296965911000+248956422JAHEPB010000048.170476909446789334467938541297
chr12255337752255688044981000+248956422JAHEPB010000443.1350570350553298505
chr122855639122855682065661000+248956422JAHEPB010000048.170476909671273496712777841820
chr122855639122855682065651000+248956422JAHEPB010000048.170476909672976146729804341820
chr122855639422855682065831000+248956422JAHEPB010000048.170476909672662576726668341529
chr122855640322855682066431000+248956422JAHEPB010000048.170476909672102606721067740647
chr122855640522855682066481000+248956422JAHEPB010000048.170476909671251226712553740447
chr122855640822855682066851000+248956422JAHEPB010000048.170476909673155616731597339922
chr122855641122855682066911000+248956422JAHEPB010000048.170476909672707566727116539856