Schema for HPRC Chains v0.1 - HPRC Chains version 0.1 prototype April 2022
  Database: hg38    Primary Table: NA189062Chain Data last updated: 2022-04-28
Big Bed File Download: /gbdb/hg38/hprcChain/NA18906#2.bb
Item Count: 25,330
Format description: bigChain pairwise alignment
fieldexampledescription
chromchr1Reference sequence chromosome or scaffold
chromStart161440721Start position in chromosome
chromEnd168464007End position in chromosome
name88Name or ID of item, ideally both human readable and unique
score1000Score (0-1000)
strand++ or - for strand
tSize248956422size of target sequence
qNameJAHEON010000083.1name of query sequence
qSize7089055size of query sequence
qStart10160start of alignment on query sequence
qEnd7088934end of alignment on query sequence
chainScore659845265score from chain

Sample Rows
 
chromchromStartchromEndnamescorestrandtSizeqNameqSizeqStartqEndchainScore
chr1161440721168464007881000+248956422JAHEON010000083.17089055101607088934659845265
chr11662119981662232455281000+248956422JAHEON010000083.17089055483223948434861058428
chr116622324516622618917781000+248956422JAHEON010000083.1708905548292954832239277403
chr1168467514219959675181000+248956422JAHEON010000053.1514087050514068464674687665
chr1219963489228558364841000-248956422JAHEON010000097.1871296739328579243803030273
chr12241892442242240763331000+248956422JAHEON010000250.1345190345183252187
chr122855639122855682055431000-248956422JAHEON010000097.187129678641964864239341820
chr122855639122855803925081000+248956422JAHEON010000131.131978371839520071158269
chr122855639322855685654001000-248956422JAHEON010000097.187129678682281868277044649
chr122855639422855682055811000-248956422JAHEON010000097.187129678604061860448741079