Schema for HPRC Chains v0.1 - HPRC Chains version 0.1 prototype April 2022
  Database: hg38    Primary Table: NA189061Chain Data last updated: 2022-04-28
Big Bed File Download: /gbdb/hg38/hprcChain/NA18906#1.bb
Item Count: 15,644
Format description: bigChain pairwise alignment
fieldexampledescription
chromchr1Reference sequence chromosome or scaffold
chromStart161398234Start position in chromosome
chromEnd231793224End position in chromosome
name7Name or ID of item, ideally both human readable and unique
score1000Score (0-1000)
strand++ or - for strand
tSize248956422size of target sequence
qNameJAHEOO010000046.1name of query sequence
qSize70508090size of query sequence
qStart0start of alignment on query sequence
qEnd70500319end of alignment on query sequence
chainScore6609390271score from chain

Sample Rows
 
chromchromStartchromEndnamescorestrandtSizeqNameqSizeqStartqEndchainScore
chr116139823423179322471000+248956422JAHEOO010000046.1705080900705003196609390271
chr12075581212075751805151000+248956422JAHEOO010000046.17050809046175151461922401592611
chr122855639122855682053661000+248956422JAHEOO010000046.170508090671688866716931541820
chr122855639122855682053651000+248956422JAHEOO010000046.170508090673390936733952241820
chr122855639822855682053941000+248956422JAHEOO010000046.170508090673077406730816241138
chr122855640222855682054231000+248956422JAHEOO010000046.170508090671912786719169640747
chr122855640322855685652831000+248956422JAHEOO010000046.170508090672517646725224143670
chr122855640522855682054581000+248956422JAHEOO010000046.170508090672808796728129239887
chr122855640722855682054451000+248956422JAHEOO010000046.170508090671801046718051740247
chr122855641122855682054651000+248956422JAHEOO010000046.170508090671666676716707639725