Schema for HPRC Chains v0.1 - HPRC Chains version 0.1 prototype April 2022
  Database: hg38    Primary Table: HG034532Chain Data last updated: 2022-04-28
Big Bed File Download: /gbdb/hg38/hprcChain/HG03453#2.bb
Item Count: 26,766
Format description: bigChain pairwise alignment
fieldexampledescription
chromchr1Reference sequence chromosome or scaffold
chromStart161440084Start position in chromosome
chromEnd168463930End position in chromosome
name118Name or ID of item, ideally both human readable and unique
score1000Score (0-1000)
strand-+ or - for strand
tSize248956422size of target sequence
qNameJAGYVV010000051.1name of query sequence
qSize7084114size of query sequence
qStart26754start of alignment on query sequence
qEnd7078418end of alignment on query sequence
chainScore657562544score from chain

Sample Rows
 
chromchromStartchromEndnamescorestrandtSizeqNameqSizeqStartqEndchainScore
chr11614400841684639301181000-248956422JAGYVV010000051.17084114267547078418657562544
chr1168471966201127581211000+248956422JAGYVV010000080.1326596191005326566103067989213
chr1201137179228639358311000+248956422JAGYVV010000039.1276031780275995632581570863
chr12130334572133627292411000-248956422JAGYVV010000299.13294195432927031042573
chr122855639122855682267291000+248956422JAGYVV010000039.127603178274181442741857541797
chr122855639122855682267281000+248956422JAGYVV010000039.127603178274898902749032141797
chr122855639122855682267271000+248956422JAGYVV010000039.127603178275774042757783541797
chr122855639122855816729301000+248956422JAGYVV010000289.1227778819610003169757
chr122855639322855682267421000+248956422JAGYVV010000039.127603178273889932738942241606
chr122855639522855682267521000+248956422JAGYVV010000039.127603178274316002743202741415