Schema for HPRC Chains v0.1 - HPRC Chains version 0.1 prototype April 2022
  Database: hg38    Primary Table: HG030982Chain Data last updated: 2022-04-28
Big Bed File Download: /gbdb/hg38/hprcChain/HG03098#2.bb
Item Count: 26,850
Format description: bigChain pairwise alignment
fieldexampledescription
chromchr1Reference sequence chromosome or scaffold
chromStart143495531Start position in chromosome
chromEnd168464007End position in chromosome
name44Name or ID of item, ideally both human readable and unique
score1000Score (0-1000)
strand++ or - for strand
tSize248956422size of target sequence
qNameJAHEPL010000043.1name of query sequence
qSize36975063size of query sequence
qStart11752510start of alignment on query sequence
qEnd36969597end of alignment on query sequence
chainScore1973585843score from chain

Sample Rows
 
chromchromStartchromEndnamescorestrandtSizeqNameqSizeqStartqEndchainScore
chr1143495531168464007441000+248956422JAHEPL010000043.13697506311752510369695971973585843
chr116849286623179992681000-248956422JAHEPL010000068.1633875261633841205837435734
chr120756371620756728121731000-248956422JAHEPL010000068.1633875263907882939082392335787
chr12075672812075789756831000-248956422JAHEPL010000068.1633875263906530339077769993365
chr122855636722855832432011000-248956422JAHEPL010000068.1633875266010879560120188183564
chr122855639522855682274661000-248956422JAHEPL010000068.163387526601876756018810241415
chr122855639522855682274651000-248956422JAHEPL010000068.163387526602123346021276141415
chr122855640022855682275031000-248956422JAHEPL010000068.163387526602257916022621340701
chr122855640322855828832391000-248956422JAHEPL010000068.1633875266003087860032798180097
chr122855640522855831232321000-248956422JAHEPL010000068.1633875266004434860050766181018