Schema for HPRC Chains v0.1 - HPRC Chains version 0.1 prototype April 2022
  Database: hg38    Primary Table: HG021451Chain Data last updated: 2022-04-28
Big Bed File Download: /gbdb/hg38/hprcChain/HG02145#1.bb
Item Count: 44,907
Format description: bigChain pairwise alignment
fieldexampledescription
chromchr1Reference sequence chromosome or scaffold
chromStart164440931Start position in chromosome
chromEnd168464007End position in chromosome
name153Name or ID of item, ideally both human readable and unique
score1000Score (0-1000)
strand++ or - for strand
tSize248956422size of target sequence
qNameJAHKSG010000215.1name of query sequence
qSize4039605size of query sequence
qStart3712start of alignment on query sequence
qEnd4034929end of alignment on query sequence
chainScore378432119score from chain

Sample Rows
 
chromchromStartchromEndnamescorestrandtSizeqNameqSizeqStartqEndchainScore
chr11644409311684640071531000+248956422JAHKSG010000215.1403960537124034929378432119
chr116847161723179322411000+248956422JAHKSG010000007.1632721340632651995780452859
chr122855639122855682073721000+248956422JAHKSG010000007.163272134599796935998012241820
chr122855640122855682074371000+248956422JAHKSG010000007.163272134600626236006304240838
chr122855640522855682075141000+248956422JAHKSG010000007.163272134601119096011232339797
chr122855640522855685672711000+248956422JAHKSG010000007.163272134600917446009222343464
chr122855640722855682074871000+248956422JAHKSG010000007.163272134599774685997788140247
chr122855641522855682075551000+248956422JAHKSG010000007.163272134600716016007200639474
chr122855642522855682076261000+248956422JAHKSG010000007.163272134600290476002944238492
chr122855642922855682076841000+248956422JAHKSG010000007.163272134600514536005184438101