Schema for HPRC Chains v0.1 - HPRC Chains version 0.1 prototype April 2022
  Database: hg38    Primary Table: HG019282Chain Data last updated: 2022-04-28
Big Bed File Download: /gbdb/hg38/hprcChain/HG01928#2.bb
Item Count: 51,966
Format description: bigChain pairwise alignment
fieldexampledescription
chromchr1Reference sequence chromosome or scaffold
chromStart161440059Start position in chromosome
chromEnd228647668End position in chromosome
name10Name or ID of item, ideally both human readable and unique
score1000Score (0-1000)
strand-+ or - for strand
tSize248956422size of target sequence
qNameJAGYVP010000015.1name of query sequence
qSize67287852size of query sequence
qStart45748start of alignment on query sequence
qEnd67197073end of alignment on query sequence
chainScore6205464479score from chain

Sample Rows
 
chromchromStartchromEndnamescorestrandtSizeqNameqSizeqStartqEndchainScore
chr1161440059228647668101000-248956422JAGYVP010000015.16728785245748671970736205464479
chr11681024601681718102411000-248956422JAGYVP010000214.169651291696516541897
chr122855639122855829634431000-248956422JAGYVP010000014.132409772028422184178940
chr122855639122855827934131000-248956422JAGYVP010000015.1672878526727861467280530180871
chr1228556393231793183851000-248956422JAGYVP010000014.13240977671693234551296293292
chr122855640022855768746761000-248956422JAGYVP010000014.132409771357314888122941
chr122855640522855836432501000-248956422JAGYVP010000014.132409772919331180187331
chr122855640622855829734091000-248956422JAGYVP010000015.1672878526723831867240238180997
chr122855640822855834934531000-248956422JAGYVP010000015.1672878526718679167222361178019
chr122855640922855703879451000-248956422JAGYVP010000015.167287852672069666720762459591