Schema for HPRC Chains v0.1 - HPRC Chains version 0.1 prototype April 2022
  Database: hg38    Primary Table: HG019281Chain Data last updated: 2022-04-28
Big Bed File Download: /gbdb/hg38/hprcChain/HG01928#1.bb
Item Count: 49,624
Format description: bigChain pairwise alignment
fieldexampledescription
chromchr1Reference sequence chromosome or scaffold
chromStart150957744Start position in chromosome
chromEnd231793224End position in chromosome
name8Name or ID of item, ideally both human readable and unique
score1000Score (0-1000)
strand++ or - for strand
tSize248956422size of target sequence
qNameJAGYVQ010000064.1name of query sequence
qSize81017584size of query sequence
qStart0start of alignment on query sequence
qEnd81011593end of alignment on query sequence
chainScore7600999579score from chain

Sample Rows
 
chromchromStartchromEndnamescorestrandtSizeqNameqSizeqStartqEndchainScore
chr115095774423179322481000+248956422JAGYVQ010000064.1810175840810115937600999579
chr1206052518206052969102031000+248956422JAGYVQ010000064.181017584552106915521114341297
chr1228556391228556820101551000+248956422JAGYVQ010000064.181017584776602247766065341689
chr1228556391228556820101541000+248956422JAGYVQ010000064.181017584777386407773906941689
chr122855639122855685698101000+248956422JAGYVQ010000064.181017584777922527779274344840
chr1228556403228556820103301000+248956422JAGYVQ010000064.181017584777654257776584240647
chr1228556406228556820103901000+248956422JAGYVQ010000064.181017584777587467775916040216
chr1228556412228556820104351000+248956422JAGYVQ010000064.181017584776580037765841139765
chr1228556412228556820104341000+248956422JAGYVQ010000064.181017584776916227769203039765
chr1228556414228556820104571000+248956422JAGYVQ010000064.181017584778279647782837039574