Schema for HPRC Chains v0.1 - HPRC Chains version 0.1 prototype April 2022
  Database: hg38    Primary Table: HG012431Chain Data last updated: 2022-04-28
Big Bed File Download: /gbdb/hg38/hprcChain/HG01243#1.bb
Item Count: 27,501
Format description: bigChain pairwise alignment
fieldexampledescription
chromchr1Reference sequence chromosome or scaffold
chromStart161460616Start position in chromosome
chromEnd181937388End position in chromosome
name47Name or ID of item, ideally both human readable and unique
score1000Score (0-1000)
strand-+ or - for strand
tSize248956422size of target sequence
qNameJAHEOY010000036.1name of query sequence
qSize20498569size of query sequence
qStart6437start of alignment on query sequence
qEnd20498426end of alignment on query sequence
chainScore1896443026score from chain

Sample Rows
 
chromchromStartchromEndnamescorestrandtSizeqNameqSizeqStartqEndchainScore
chr1161460616181937388471000-248956422JAHEOY010000036.1204985696437204984261896443026
chr1181938962228628954151000+248956422JAHEOY010000047.1468964790468491124221047564
chr12075581212075751805311000+248956422JAHEOY010000047.14689647925601769256188601590103
chr122855638922855829434411000+248956422JAHEOY010000047.1468964794666347346803702152953
chr122855639122855834828851000+248956422JAHEOY010000047.1468964794659418446596169186667
chr12285563912286476686491000+248956422JAHEOY010000047.14689647946585229467852381021556
chr122855639222855662499411000+248956422JAHEOY010000047.146896479467148254671505722201
chr122855639722855665695211000+248956422JAHEOY010000047.146896479466924824669274124941
chr1228556403228556624102421000+248956422JAHEOY010000047.146896479466523154665253621128
chr1228556405228556624102671000+248956422JAHEOY010000047.146896479467504914675071020928