Schema for HPRC Chains v0.1 - HPRC Chains version 0.1 prototype April 2022
  Database: hg38    Primary Table: HG011091Chain Data last updated: 2022-04-28
Big Bed File Download: /gbdb/hg38/hprcChain/HG01109#1.bb
Item Count: 30,810
Format description: bigChain pairwise alignment
fieldexampledescription
chromchr1Reference sequence chromosome or scaffold
chromStart143522684Start position in chromosome
chromEnd219958175End position in chromosome
name3Name or ID of item, ideally both human readable and unique
score1000Score (0-1000)
strand++ or - for strand
tSize248956422size of target sequence
qNameJAHEPA010000003.1name of query sequence
qSize79677417size of query sequence
qStart3049807start of alignment on query sequence
qEnd79677416end of alignment on query sequence
chainScore6838695690score from chain

Sample Rows
 
chromchromStartchromEndnamescorestrandtSizeqNameqSizeqStartqEndchainScore
chr114352268421995817531000+248956422JAHEPA010000003.1796774173049807796774166838695690
chr1219960972228558364911000+248956422JAHEPA010000042.1868606825608575102807106863
chr122855639122855682275111000+248956422JAHEPA010000042.186860688611097861376540666
chr122855639122855682274441000+248956422JAHEPA010000042.186860688590974859140541797
chr122855639122855682274431000+248956422JAHEPA010000042.186860688629003862943441797
chr122855639122855682274281000+248956422JAHEPA010000042.186860688570860857129142011
chr122855639122855683073901000+248956422JAHEPA010000042.186860688588743858918242653
chr122855639122855836430841000-248956422JAHEPA010000096.131887361762019611189023
chr12285563912317932331271000-248956422JAHEPA010000096.13188736287833182398295439717
chr122855640122855682275251000+248956422JAHEPA010000042.186860688633489863391040422