Schema for HPRC Chains v0.1 - HPRC Chains version 0.1 prototype April 2022
  Database: hg38    Primary Table: HG010711Chain Data last updated: 2022-04-28
Big Bed File Download: /gbdb/hg38/hprcChain/HG01071#1.bb
Item Count: 56,645
Format description: bigChain pairwise alignment
fieldexampledescription
chromchr1Reference sequence chromosome or scaffold
chromStart161440059Start position in chromosome
chromEnd246689818End position in chromosome
name9Name or ID of item, ideally both human readable and unique
score1000Score (0-1000)
strand-+ or - for strand
tSize248956422size of target sequence
qNameJAHBCF010000010.1name of query sequence
qSize85221375size of query sequence
qStart1663start of alignment on query sequence
qEnd85216841end of alignment on query sequence
chainScore7886103348score from chain

Sample Rows
 
chromchromStartchromEndnamescorestrandtSizeqNameqSizeqStartqEndchainScore
chr116144005924668981891000-248956422JAHBCF010000010.1852213751663852168417886103348
chr122855639922855779943771000-248956422JAHBCF010000010.1852213756711666767118093134035
chr122855640022855833032811000-248956422JAHBCF010000010.1852213756703606467038013183505
chr1228556415228556822112931000-248956422JAHBCF010000010.185221375670965286709693539534
chr1228556417228556822113011000-248956422JAHBCF010000010.185221375670763796707678439474
chr1228556417228556822113001000-248956422JAHBCF010000010.185221375671211656712157039474
chr1228556426228556822114561000-248956422JAHBCF010000010.185221375670607146706111138053
chr1228556435228556822115091000-248956422JAHBCF010000010.185221375671010266710141337710
chr1228556437228556822115591000-248956422JAHBCF010000010.185221375670405736704095837510
chr1228556437228556822115581000-248956422JAHBCF010000010.185221375670808816708126637510