Schema for HPRC Chains v0.1 - HPRC Chains version 0.1 prototype April 2022
  Database: hg38    Primary Table: HG007351Chain Data last updated: 2022-04-28
Big Bed File Download: /gbdb/hg38/hprcChain/HG00735#1.bb
Item Count: 32,511
Format description: bigChain pairwise alignment
fieldexampledescription
chromchr1Reference sequence chromosome or scaffold
chromStart161459626Start position in chromosome
chromEnd168464007End position in chromosome
name69Name or ID of item, ideally both human readable and unique
score1000Score (0-1000)
strand++ or - for strand
tSize248956422size of target sequence
qNameJAHBCH010000049.1name of query sequence
qSize7029563size of query sequence
qStart0start of alignment on query sequence
qEnd7021202end of alignment on query sequence
chainScore659223930score from chain

Sample Rows
 
chromchromStartchromEndnamescorestrandtSizeqNameqSizeqStartqEndchainScore
chr1161459626168464007691000+248956422JAHBCH010000049.1702956307021202659223930
chr1168478160227907196121000-248956422JAHBCH010000037.1593906096194593906095482380091
chr12279073552285582831281000+248956422JAHBCH010000103.1667105065088862130763
chr122855639122855833234981000-248956422JAHBCH010000241.1462793508441526184732
chr122855639322855831835771000-248956422JAHBCH010000056.132300665802359943180969
chr1228556415228556714114971000-248956422JAHBCH010000056.13230066558045610328957
chr1228556416231793170791000-248956422JAHBCH010000056.13230066691823226115296399112
chr122855641822855831035791000-248956422JAHBCH010000056.132300663798939909180937
chr122855641822855832035581000-248956422JAHBCH010000056.132300661795919879181982
chr122855643822855834035551000-248956422JAHBCH010000241.1462791724319163182142