Schema for HPRC Chains v0.1 - HPRC Chains version 0.1 prototype April 2022
  Database: hg38    Primary Table: HG007331Chain Data last updated: 2022-04-28
Big Bed File Download: /gbdb/hg38/hprcChain/HG00733#1.bb
Item Count: 36,451
Format description: bigChain pairwise alignment
fieldexampledescription
chromchr1Reference sequence chromosome or scaffold
chromStart161440081Start position in chromosome
chromEnd228558312End position in chromosome
name10Name or ID of item, ideally both human readable and unique
score1000Score (0-1000)
strand-+ or - for strand
tSize248956422size of target sequence
qNameJAHEPQ010000026.1name of query sequence
qSize67159412size of query sequence
qStart33225start of alignment on query sequence
qEnd67134197end of alignment on query sequence
chainScore6203697059score from chain

Sample Rows
 
chromchromStartchromEndnamescorestrandtSizeqNameqSizeqStartqEndchainScore
chr1161440081228558312101000-248956422JAHEPQ010000026.16715941233225671341976203697059
chr122855639522855828536391000-248956422JAHEPQ010000043.1182039266886470784181611
chr1228556398246689775491000-248956422JAHEPQ010000043.118203926113709181976761698895200
chr122855640122855829336421000-248956422JAHEPQ010000026.1671594126715017467152094181516
chr122855640722855829936511000-248956422JAHEPQ010000043.1182039263077132691180994
chr122855641822855830836481000-248956422JAHEPQ010000043.1182039263974841668181219
chr122855642822855705878001000-248956422JAHEPQ010000043.118203926576915834859394
chr122855642922855832236521000-248956422JAHEPQ010000043.1182039268908591005180845
chr122855643022855800241931000-248956422JAHEPQ010000043.1182039268684188445150983
chr122855643222855832436491000-248956422JAHEPQ010000043.1182039261959121511181179