Schema for HPRC Chains v0.1 - HPRC Chains version 0.1 prototype April 2022
  Database: hg38    Primary Table: HG006211Chain Data last updated: 2022-04-28
Big Bed File Download: /gbdb/hg38/hprcChain/HG00621#1.bb
Item Count: 31,622
Format description: bigChain pairwise alignment
fieldexampledescription
chromchr1Reference sequence chromosome or scaffold
chromStart143495531Start position in chromosome
chromEnd228558348End position in chromosome
name9Name or ID of item, ideally both human readable and unique
score1000Score (0-1000)
strand++ or - for strand
tSize248956422size of target sequence
qNameJAHBCD010000022.1name of query sequence
qSize90452069size of query sequence
qStart4912231start of alignment on query sequence
qEnd90297061end of alignment on query sequence
chainScore7500282517score from chain

Sample Rows
 
chromchromStartchromEndnamescorestrandtSizeqNameqSizeqStartqEndchainScore
chr114349553122855834891000+248956422JAHBCD010000022.1904520694912231902970617500282517
chr120605251820605296992591000+248956422JAHBCD010000022.190452069678109966781144841297
chr122547005422547235625861000+248956422JAHBCD010000022.1904520698718876087191062220498
chr122547235622547279694281000+248956422JAHBCD010000022.190452069871910648719148739992
chr12254727962254862535061000+248956422JAHBCD010000022.19045206987191492872049411279194
chr122548625322549285912061000+248956422JAHBCD010000022.1904520698720494487211550624942
chr122549285922549408347751000+248956422JAHBCD010000022.1904520698721155487212778114662
chr122549408322549922415281000+248956422JAHBCD010000022.1904520698718361987188760482165
chr122855639122855681492661000+248956422JAHBCD010000022.190452069902861439028656641247
chr122855639122855681492651000+248956422JAHBCD010000022.190452069902950769029549941247