Gene interactions and pathways from curated databases and text-mining
SMC1A: top 25 interacting genes (chrX:53401069-53449603)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only SMC1A-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
Gene:               Hide non-SMC1A interactions     Show top Genes on graph    

Less-frequently mentioned interactions with SMC1A, not among the Top 25
Other genes interacting with SMC1A. Mouse-over to show number of abstracts or databases. Sorted alphabetically (sort by article count).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

ACACB ACIN1 ADD3 ADNP AFG3L2 AGL AGPS
AIFM1 AIRE AKAP8 AKAP8L ALDH3A2 AMBRA1 AMOT
ANKRD28 ANKRD44 APC ARHGEF2 ARMCX3 ATAD2 ATG14
ATG2A ATG2B ATG4B ATG4C ATM ATP1A1 ATP2A3
ATR ATRX AURKB BAG2 BAG6 BAIAP2L1 BARD1
BAZ1A BAZ1B BCLAF1 BDH1 BECN1 BLM BRCA1
C1QBP C2orf47 CACYBP CAD CALM1 CALU CAMKK2
CAND1 CASP4 CCT3 CCT4 CCT8 CDCA5 CDK12
CDK2 CDK20 CDK4 CDK8 CEBPA CEBPZ CENPK
CENPL CENPM CENPN CENPO CENPP CENPQ CENPT
CENPU CEP162 CEP170B CEP192 CHCHD3 CHD3 CHD6
CHTF18 CIRH1A CKAP5 CLASP1 CLASP2 CLIP1 CLP1
CLPB CLU CPNE3 CPSF1 CPSF2 CPSF3 CPSF7
CPT1A CROCC CSTF1 CSTF2 CSTF3 CTCF CTNNBL1
CUL3 CWC15 CYLD DDX17 DDX20 DDX23 DDX27
DDX5 DFFA DHX38 DIABLO DICER1 DIDO1 DKC1
DNAJA1 DNAJA2 DNAJA3 DNAJB1 DNAJB11 DNAJB2 DNAJB6
DNAJC7 DNTTIP2 DSN1 DYNC1H1 DZIP3 E2F2 EBNA1BP2
EEF2 EFTUD2 EHMT2 EPS8 ERC1 ERCC6L ERLIN2
ESCO1 ESCO2 ESPL1 ESYT2 ETV5 FAF2 FAM115A
FAM175B FAM193A FANCD2 FANCI FBF1 FBXO6 FKBP6
FKBP8 FLCN FLNA FLNC FNIP1 GCFC2 GCN1L1
GEMIN2 GEMIN4 GEMIN5 GFPT1 GSPT1 GTF2F1 GTF2F2
GYG1 GYS1 H1FX H2AFX HDAC1 HDAC11 HDAC2
HDAC5 HDAC8 HEATR1 HECTD1 HHIP HIST1H2AC HIST1H2BO
HIST1H3A HIST1H3B HIST1H3C HIST1H3D HIST1H3E HIST1H3F HIST1H3G
HIST1H3H HIST1H3I HIST1H3J HIST1H4A HIST3H3 HJURP HMGA1
HMGN1 HNRNPA0 HNRNPA1 HNRNPA2B1 HNRNPA3 HNRNPC HNRNPD
HNRNPF HNRNPH1 HNRNPH2 HNRNPK HNRNPL HNRNPM HNRNPR
HNRNPU HSD17B12 HSPA2 HSPA8 HUWE1 IGF2BP3 IK
IKZF1 ILK INCENP IPO7 IQGAP2 ITCH ITGB3BP
KCTD10 KCTD3 KDM1A KDM1B KIAA0226 KIAA0226L KIF13A
KIF18A KIF2A KIF2B KIF2C KIFC1 KNTC1 KPNA6
KPNB1 KRI1 LCN1 LCN1P1 LMNA LMNB1 LMNB2
LSM2 MAD1L1 MAD2L1 MAGED1 MAGED2 MAGOH MAP3K5
MAP3K6 MAPK14 MAPRE1 MAST3 MAU2 MBD2 MBD3
MCCC2 MCM2 MCM5 MCM6 MCM7 MDC1 MDM1
MDN1 MECP2 MET METTL21B MGMT MIS12 MISP
MLF2 MLH1 MME MRE11A MSH2 MSH6 MTA1
MTA2 MTMR3 MYBBP1A MYC MYCBP2 NASP NBN
NCBP1 NCBP2 NDC80 NDE1 NDEL1 NDUFA10 NEDD8
NEK4 NEK6 NFATC4 NHP2L1 NIPBL NME2 NOP2
NOP56 NOP58 NOTCH1 NOTCH2 NPLOC4 NRBF2 NSL1
NSMCE2 NTPCR NUDC NUDT21 NUF2 NUMA1 NUP107
NUP133 NUP153 NUP160 NUP37 NUP43 NUP85 NUP93
NUP98 OBSL1 OGDH PABPC1 PABPN1 PAFAH1B1 PAPD7
PAPOLA PARP1 PARS2 PAXBP1 PAXIP1 PCBP1 PCBP2
PCF11 PCNA PDCD11 PDS5A PDS5B PES1 PHF1
PHF5A PHIP PIK3C3 PIK3CG PIK3R4 PLEKHG1 PLK1
PLK2 PLRG1 PMF1 PML PNN POLA1 POLR2A
POLR2B POLR2C POLR2D POLR2E POLR2F POLR2G POLR2H
POLR2I POLR2J POLR2K POLR2L POT1 PPAN PPP1CC
PPP1R12A PPP1R9A PPP1R9B PPP6C PPP6R1 PPP6R2 PPP6R3
PRKAA1 PRKAA2 PRKAB2 PRKAG1 PRKAG2 PRKDC PRPF19
PRPF4 PRPF6 PRPF8 PSMB2 PSMC1 PSMC2 PSMC4
PSMC5 PSMC6 PSMD1 PSMD2 PTBP1 PTOV1 PWP1
RAD21 RAD21L1 RAD50 RAE1 RANBP2 RANBP9 RANGAP1
RASSF8 RB1 RB1CC1 RBBP4 RBBP7 RBM12B-AS1 RBM14
RBM22 RBM28 RBM34 RBM8A RBMX RCC2 RCN1
RCN2 RCOR2 REC8 RFC1 RIF1 RNF20 RNF219
RNF8 RNPS1 RPGR RPS27 RRP12 RSL1D1 RUNX1
RUVBL2 SDCCAG3 SEC13 SEC16A SEH1L SF3A1 SF3A2
SF3A3 SF3B1 SF3B2 SF3B3 SF3B4 SF3B5 SGOL1
SGOL2 SH3PXD2A SHKBP1 SKA1 SKA2 SLC25A42 SLC27A4
SMARCA5 SMARCAD1 SMC1B SMC2 SMC3 SMC4 SMN1
SMN2 SNRNP200 SNRNP40 SNRNP70 SNRPA SNRPA1 SNRPB
SNRPB2 SNRPD1 SNRPD2 SNRPD3 SNRPE SNRPF SNRPG
SNW1 SNX18 SON SPC24 SPC25 SPDL1 SPECC1
SPTLC1 SRRM1 SRRM2 SRSF1 SRSF11 SRSF2 SRSF3
SRSF4 SRSF5 SRSF6 SRSF7 SRSF9 SSR4 SSU72
STAG1 STAG2 STAG3 STIM1 STIM2 STUB1 STYXL1
SUGP1 SUGT1 SUMO1 SUN1 SUN2 SUPT16H SVIL
SYCE1 SYCE2 SYCP1 SYCP2 SYCP3 SYNE1 SYNE2
TAOK1 TBC1D7 TBK1 TBKBP1 TERF1 TERF2 TERF2IP
TEX12 TFDP1 TFIP11 THRA THRAP3 THRB TINF2
TMOD3 TOP2A TP53BP1 TP53BP2 TPM3 TPM4 TRABD
TRAFD1 TRIM28 TRIM41 TSC1 TTC27 TTF2 TXNL4A
TYW1 U2AF1 U2AF2 UBC UBE2I UBL4A UBR5
UFD1L ULK1 UPF3B USP10 USP11 USP13 USP32
UTP14A UTP18 UTP6 UVRAG WAPAL WDR33 WDR36
WDR45 WDR74 WFDC5 WRNIP1 XAB2 XPO1 XPOT
YBX2 YBX3 YLPM1 YY1 ZFR ZMYM2 ZNF326
ZSCAN2 ZW10 ZWILCH ZWINT
Data information
Please see the Gene Interactions Track Manual.