Gene interactions and pathways from curated databases and text-mining
HDAC1: top 25 interacting genes (chr1:32757683-32799227)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only HDAC1-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
Gene:               Hide non-HDAC1 interactions     Show top Genes on graph    

Less-frequently mentioned interactions with HDAC1, not among the Top 25
Other genes interacting with HDAC1. Mouse-over to show number of abstracts or databases. Sorted by article count (sort alphabetically).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

PTGS2 CASP8 SFN SIN3A CASP7 HDAC4 IL8
HLA-DRB1 IL2 IFNG HDAC3 CASP9 CDKN2A JUN
WNT1 IL1A SP1 WNT6 AKT2 AKT1 KRT27
AKT3 WNT3 E2F1 WNT2 ESR1 WNT4 WNT16
TGFB1 WNT11 RUNX1 SLAMF1 TCF12 TCF3 TCF21
TCF23 TCF7 HDAC7 TCF15 TCF25 TCF4 TCF20
CEBPA TCF24 PPARG TCF19 BCL2 ESR2 GTF2B
CDK2 CDKN2B NOTCH4 PRKAR2B CDK8 PRKAR2A LBH
CDK9 CDK1 CDK17 NOTCH3 CDK4 CDK15 HLA-DRA
CDK18 TNF MMP9 CDK12 CDK3 CDK19 HDAC5
KLF4 CDK14 CCND1 RUNX2 PRKACB CDK5 HDAC10
HDAC6 DNMT1 STAT3 CDK13 PRKAR1B CDK10 CDK6
CDK16 CXCR4 NOTCH2 PRKACG CDK20 SUMO1 SAP30
ARF5 STAT1 PRKAR1A SIRT1 VEGFA CDK7 ARF1
AR PDCD6 PDCD2 SUMO3 PI3 BMP4 SAP130
ARID4B IGF1 MAPK12 MAPK11 CD8A MMP28 PDCD11
CDH13 MMP13 MMP3 TGFB2 MAPK6 HDAC9 ARF6
CDH16 CREB3 BMP2 SETD2 CREB1 PIK3R1 CDH15
SPP1 YY1 CDH24 BRCA1 PDCD10 CDH7 TGFB3
RB1 HDAC8 HIF1A PTBP1 MEFV SRC BMF
MAPK14 NAB2 MMP14 CREB5 TNFSF10 MAPK4 HIPK2
RECK CDH26 NR4A1 PCNA PDCD7 PLAU CDH3
MAPK8 CDH10 BMP1 CDH11 SUDS3 PDCD4 APCS
CDH17 HSP90AA1 ARF3 MAPK7 FAS HDAC11 CDH4
ARF4 MAPK15 CDC20 MAPK10 CDH12 CDH5 RCOR1
FXN IL4 SOD2 SUMO4 MAPK3 CDH6 CDH19
CDH20 IGF2 MYC MAPK9 PIK3CA CDH18 CDH22
CDH2 KDM1A NOS3 SUMO2 IL1B MAPK1 MDM2
IL10 CDH9 CA2 CDH8 CDH23 SLAMF6 PDCD1
PDCD5 MAPK13 NEUROD1 TLR2 MMP12 INS BMP10
RARB CDYL MMP10 PTBP2 NEUROD2 MMP17 SLC22A3
ZNF217 SOD1 OLR1 CLU E2F4 TERT PTEN
NR5A1 COA3 MMP24 CEBPZ CTNNB1 RREB1 XRCC6
COA4 FOS RPAP1 BAX BMP6 KLF8 UCN
ID1 WNT5A NEUROD4 H2AFX RBPJ POLR2K TMED7
SOCS3 MMP15 GP6 COA1 SLAMF9 GAL USO1
ERBB2 RCOR3 SIRT6 MMP25 POLR2A IGFBP3 HNRNPF
POLR2H JARID2 SIRT3 CHUK RELN CREBBP HNRNPH1
BCL3 POLR2D GTF2F2 CTDP1 RNF19A GP2 MMP8
SOD3 POLR2L GP9 HSPA5 FGFR3 COA5 ALOX15
VIM CTBP1 GPI SMAD3 SIRT5 IFNB1 BCL6
SERPINB5 SLAMF7 IL18 HMGB1 TNFRSF10B REST MMP11
CD34 IL12B ICAM1 NOS2 SUZ12 FGF4 SDS
EP300 COA6 MMP20 MYH14 POLR2E GP5 MBD2
MCAT RHOB MMP2 MT3 ZEB1 MICA PDLIM7
BMP3 FGF2 TAF1 MCOLN1 ABCB1 GATA1 BMP15
IL13 PRL MMP16 POLR2J BMP7 KIT IKBKB
CDKN2D CSF2 POLR2B DYNLL1 KAT2B CCND3 TXN
NAB1 NEUROD6 MMP26 POLR2I GTF2F1 SLC2A4 POLR2C
MMP19 IL9 SIRT2 TGFBR2 ZMYM2 KRT36 CD40LG
MMP7 BMI1 KDR IL5 BMP5 GSK3B CEBPD
MMP1 ADAMTS1 MMP27 POLR2F SIRT7 FOSL1 NGF
GGT2 SLAMF8 OPN1LW POLR2G MMP21 ADAMTS5 IL12A
ABCC1 CD8B EGF CCL2 SIRT4 PTMS GSG2
EEF1A2 SEPT9 PRDM4 PSMC3 TFDP2 BEND3 GLUD1
HNRNPA0 PWWP2A GART FKBP3 COPG1 FDFT1 IDH3G
DHX9 SLC25A5 ZNF512B ALYREF BAG2 RPA2 SQSTM1
ZMYND8 APPL1 HIST1H2BK RABEP2 TKT TLE4 FLNA
ARID5B CCT8 FAM60A HSD11B2 PEX14 RPL35A HIST1H2BL
SNRNP200 FBL CCT5 CAMK2B HADHA BHLHE41 ESCO1
RFC1 SMCHD1 TGIF2 RCC1 MYO9A HNRNPR HNRNPH2
RPN2 LARP7 KPNA6 RPL6 SF1 ZMYM3 TAF1B
ITGAV NR1D2 RUVBL1 SNRPE VASP FLOT2 RAB11B
MOGS GLI1 CSNK2A1 MMS19 RUVBL2 DIMT1 SUFU
ADD1 SARS UBTF GCN1L1 EIF3F RELB SEPT2
ARL1 SAP30L C8orf33 HIC1 PBX1 SMC1A TFRC
TUBB4B SPEN REPIN1 MT-CO2 GLRX3 G6PD HOXA11
MSN BAZ2A HIST1H3F RPL24 KLF1 TOP2B CBX5
SMEK1 ATP5J2 PITX2 ANXA1 ELMSAN1 PLK1 CDK5R1
TUBB TCF1 TAB2 CABIN1 ZGPAT RANGAP1 IQGAP2
LASP1 XPO1 HIST1H3D ATP5C1 OVOL1 AP2A1 MKX
SLC25A11 KRT5 PSMC2 HELLS ING1 DDIT3 POLD1
LRBA CDK2AP1 MAGEA6 DDX17 NUP214 INSM1 ESCO2
PRRG4 ALDOA USP15 MAGEA1 CPSF6 NOP2 RPL34
IQGAP3 IPO4 PDHB XRN1 U2SURP HSPA6 FBXW8
NFIX HMGB2 HES1 AP2B1 UBC RCHY1 MAML2
GATAD1 RAD21 ETHE1 PHF12 LYL1 HIST1H3J SF3A3
PSMG1 TNRC18 THAP11 TSHZ3 DYNC1H1 PSIP1 HIST1H1B
NDUFS2 MEF2B TMPO PPP1CC HSPA4 MCM6 CBX1
NEK9 C7orf50 KIDINS220 PRKCB ATF3 RAP1B PTMA
BBX EID2B CACYBP SMURF1 NUP98 RFC2 SSBP1
MIER2 BMP2K PAX3 CHD5 OLA1 IGHE SYK
PSMD2 BAHD1 AARS SNRPD3 PSMB5 BZW2 BUB1
IDH3B RAE1 SNRNP70 ILK DNTTIP1 NR2F2 PSMA2
TAF12 IGF2BP1 HSPB1 BANF2 RPL32 SALL1 PRDM5
SRRM2 ITGA5 IDI1 HP1BP3 HR NDUFA9 YWHAB
ARHGAP35 ACLY CITED1 IKZF3 SPTBN1 RPL22 NACA
CBX8 PSMA7 CPSF2 TBL3 DEK RPA1 PDAP1
SMAD4 IGF2BP3 SATB2 DHX30 DNAJB1 TOP1 ERG
PFKP NKX3-2 VBP1 HIST1H3A TAL1 HUS1 ZC3HAV1
SF3B1 MORF4L1 PAAF1 ZBTB2 CPSF7 HIST1H3H KCTD11
FERMT3 PSMB4 SMO PRDX3 TLE2 MAD1L1 MYO9B
TRMT1L PGAM5 C7orf26 ILF3 BRIX1 IGF2BP2 ATP2A2
AKAP8 ATAD3A CHD2 SYNCRIP BCL11A DPM1 AIRE
PTPN14 CORO1B HIST1H3I GNL3 PCGF6 RPS15 WDR77
GDI2 CORO1C CCAR2 SNRPD1 ASUN MIER1 HCFC1
CCDC6 CSE1L GFI1 MCM2 RAB11A CS ACTA1
CCT4 DLD C14orf166 TRIM21 ALDH18A1 MORF4L2 STIP1
NUP205 SNAI3 HIST1H2BD PPP2R1A ARPC4 RAB10 TPM3
TUBA1A SCRIB SFPQ HBP1 GAR1 RPS16 IPO9
RARG POLD3 HSPD1 PAFAH1B2 ARHGEF2 RXRB RXRG
UBR2 HSP90AB1 KRT10 QKI SLC3A2 UHRF2 MBD3L1
RPL36 GRWD1 CLTC NDUFV2 STRN EXOSC6 C1QBP
CLNS1A CCT3 SLC25A3 MSH3 PRKG1 YES1 AP2A2
PRMT1 ACTN4 ADNP XRCC5 ZW10 RNGTT PSMG2
MCFD2 NUP133 CPNE1 KRT1 HSPA1A TRRAP NCL
SPTLC1 ACOT13 RPL28 GSTK1 MPP1 LRPPRC MRPS6
SKP1 ZNF148 TARS PPARD NR2C2 UBE3A H2BFS
NECAP2 DNAJA1 PPARBP CAP1 PRPS2 GTF3C2 RBM39
PRPF6 HIST1H1A UBASH3B NUP153 LMNA HIST2H2AA4 PHB2
RBPJL RPL27A BCOR RCC2 SKIL XPO5 ATR
NUP210 PSMD3 KPNB1 COPG2 IFRD1 HSPG2 GTF2I
H2AFV SRSF3 CCND2 FEN1 RFC3 RPS25 PHGDH
MS4A2 DDX18 EIF3E PI4KA CSNK2A2 PFKL TP73
RPL8 SRSF2 STON2 STOM RPL12 SNRPA PFDN2
H3F3A PCBP1 HIST1H3B COPB1 CAPZA1 RXRA MYL6
TRAP1 FGFR1OP RPS11 MAML1 LSM12 ZNF121 PHF14
ERCC6 PPP2R1B EIF3B HLX XPOT USP39 DAXX
PLOD3 BUB1B STAT2 YWHAE MRPS34 MSH6 SUV39H1
TLE3 PARK7 SEC22B SKI PFDN6 HIST1H1C PELO
SRSF7 KRT2 SRSF5 CHD1 GSTO1 KRT31 MYO5C
RPN1 RCOR2 PKM KDM5B GLI2 DDX47 C3orf33
YBX1 FLOT1 ANXA2 TRMT61A SEC23B CLTB NR3C1
PSMA4 RPL29 YWHAQ NDUFS1 MDH2 POLR1C RRP1B
TFAP4 TUBGCP2 CBFA2T3 WIZ UHRF1 E4F1 VAPA
ZBTB16 YTHDF2 APBB1 NRIP1 MRTO4 RERE NDUFA2
NUP62 NPM1 TRAF6 DACH1 DDX5 AKR1C1 NR2E3
ACTBL2 GLI3 SSRP1 TFCP2 CCT6A ZNF395 UBE2N
TSR1 TRIM24 SET BMS1 RPL13A MRPL13 CUX2
HIST1H3E TLE1 TCP1 ZNF76 HUWE1 HIGD1A CHTF18
PSMA6 PELP1 C11orf30 IDH2 DCT NDUFA8 DGCR8
ASS1 IPO7 NF1 HNRNPA3 PAICS ZFPM1 MAP4
ELAVL1 TFAM CLIC2 U2AF1 UBE2M ATF2 HSPA8
EIF5B ANP32B BAZ1A CDK2AP2 TPR SOX6 MCM3
DNMT3B INTS10 TTF1 TRIM33 PRDX1 TTC9C NOP56
STAG2 GRIP1 NAPA CNOT1 KPNA2 RPP30 SMAD2
GALE SNRPB TSC22D3 AHNAK SSBP2 HIST1H1D RPL31
EIF3K WDR36 TTLL12 EIF4A1 TUBG1 ZNF609 EEF1A1P5
HMGA1 CIR1 NFYC RPL15 MAX SEC61B RFC5
EXOSC10 LGALS1 ATP1A1 KANK2 SUCLG1 RPS15A GANAB
AKAP8L RAN DNAJA3 EMG1 COPE LONP1 DIAPH1
GMPS STAG1 STAU1 PPP6C PGK1 MRPS22 CELF2
ERCC3 AIMP2 PUF60 MYBBP1A ACTR3 EIF2S1 HSPH1
TWIST1 LCP1 ZMYND11 SETD8 GTF3C4 SEC61A1 SUB1
SAP30BP C16orf87 ZNF521 SENP1 FANCD2 ESYT1 NR0B2
PDIA6 FBXW7 KPNA4 BROX SATB1 MBD4 RPS10
SRI EIF5 PPP2R2A PRPF19 HIST1H4A APOBEC3C DNMT3A
TUFM PRDM1 SRSF9 EPN1 RPL5 SSB SMC3
VHL ZYX HIF1AN HNRNPD PLK4 SQRDL IRAK1
DACT1 JDP2 RBFOX1 KAT5 DROSHA DDX3X TFPI
ST13 NHP2L1 KDM4C HNRNPU EID2 HADHB MYT1
CCT2 DNAJA2 BANF1 SMARCAD1 USP24 DDX6 PPP6R3
HIST2H3A EEF1G ACADM EBNA1BP2 STAT5A PRPF4 STXBP3
RTCB POLE RPS7 AATF PRPF8 GATA2 CDC5L
PRKDC AP2M1 TRIM27 EEF2 TLN1 RPL19 SOX5
IRF5 HNRNPDL GMNN ABCF1 SMAD1 ILVBL ATP5A1
DDB2 HIST3H3 BCL11B EXOC6 EPB41 RPL4 NKX2-5
SMAP2 SMC2 PPP2R5E RAF1 ZNF827 TRIM28 VCL
MBTPS1 ANXA5 GCDH IGF2R PPA1 NARS EMD
IPO13 HNRNPK APEX1 NUP155 IKZF1 STRN3 B2M
MBD3L2 IDH3A PSMC6 SRSF1 ARPC3 ARRB2 RAP2B
EXOSC3 KPNA3 ARHGEF1 CYR61 RAB18 PSMA5 P4HA1
EIF2S3 RFC4 MRPS23 ZNF592 RSU1 PLAGL1 AASS
NUP54 POLRMT MDN1 IQGAP1 SMARCD1 TFDP1 RAP1A
COMT PSMA1 NHP2 SLC25A12 RICTOR BCL6B RAB35
NR2E1 PSMD13 UBE2I RPS26 CAND1 SLC25A13 RALA
ELK1 HIST1H3G PHB TBL1X TUBA1C UBE3C LMO4
ZBTB7A SHOC2 TMEM54 PRKACA RPS23 MYL4 ACACA
PSMA3 EXOSC2 SF3B6 SLIT2 VPS26A BAG6 MIER3
RNH1 CNN2 KRT18 NMI UBE2L3 PPP1CA ETFA
RPL23A PAPOLA TBL1XR1 EIF4H HIST1H2AA SPI1 NAPG
TADA2A GABPA RPL7 PPID NAT10 HIST1H2AG MED4
NR2C1 KIAA0368 KPNA1 SSBP3 OGT PWP2 PSME4
CSNK2B TRERF1 FLNB SNAI1 PDLIM5 MCM7 BACH1
DZIP3 NONO DEC1 HIST1H1E SMC4 PFDN5 MRPS28
YWHAZ BANP ABCB7 HEXIM1 YWHAG SMARCA5 NFKB2
TXNDC5 BHLHE40 MAFK GTF3C1 SMARCD3 TUBB6 HIST2H2AA3
MEN1 PRMT5 EFCAB6 BUB3 MACF1 RPS24 POLDIP3
FUS PSMB3 MEF2D CEPT1 CAPZB SNW1 ATP5B
PSMC1 PPP2CA ARL2 SS18 NAA15 DDX21 ZBTB17
IKBKAP NKX2-2 RALY PSMD4 RPLP2 MAPKAP1 DDX50
GNAI3 TUBA4A HNRNPA2B1 PADI4 FN1 IKZF2 LDHA
KDM5C TPD52L1 OAT ENO1 THRB SSX2 LMO7
DDX52 HIST1H3C GTPBP4 REL PA2G4 WISP2 HIST3H2BB
PTGES2 KARS RAC1 EID3 RPL10A LDB1 BMX
YWHAH SRPK1 RAB5C EIF3A NDUFS3 GTF3C3 CBX3
TBL1Y RSL1D1 DPY30 MTA3 IPO5 NFYA CLIC5
ASH2L PRDX6 IMPDH2 BRCA2 ALDH1B1 PSMC4 RUNX1T1
MAPRE1 ZNF281 RPL17 HIST1H2BJ VWA9 RFX1 ERLIN2
ESYT2 SYMPK MBD1 SETDB1 KIF4A ZNF687 SAMSN1
RAB7A VPS28 CKAP5 SSR1 TTC27 NDUFA5 EFTUD2
IRS4 GPS2 GTPBP1 DHX15 SND1 RPL14 LDHB
FAU TGIF1 KDM4A EIF4ENIF1 ADH5 FOXH1 MYOD1
SIPA1 SF3A1 ITGA4 TLE6 EEF1B2 NFE4 MARS
TK1 FARSB NCBP1 POU2F1 ESD RPL21 HINFP
STX4 SPTAN1 PSMB2 SMAD5 BRCC3 SUPT16H HEY2
ITGB1 KDM5A ACOT8 VPS35 RAD9A QARS EPS15
NFKBIA SAR1A LMNB1 SEC24C MYL12B EIF3I TOP2A
SUPT5H CFL1 EEF1A1 FOXG1 NUDT21 LRRC59 RBM12
MSH2 ATP6V1B2 HTATIP NKX3-1 SSR4 PSMD11 PTK2
PICALM GSE1 PPT1 TAF6L KIF2A HESX1 MLLT4
H1FX PSMB1 VPRBP RPL35 NOP58 ZNFX1
Data information
Please see the Gene Interactions Track Manual.