A problem occurred in a Python script. Here is the sequence of
function calls leading up to the error, in the order they occurred.
/usr/local/apache/cgi-bin/hgGeneGraph in showGraphBrowser() |
1379 conn = sqlConnect(GGDB)
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1380
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=> 1381 graphLinks, lowLinks = buildGraph(conn, gene, geneCount, MINSUPP, addNeighbors)
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1382 weightedLinks, minAbsCount = flattenLink(graphLinks)
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1383
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graphLinks undefined, lowLinks undefined, global buildGraph = <function buildGraph>, conn = <pymysql.connections.Connection object>, gene = 'C7ORF25', geneCount = 25, global MINSUPP = 2, addNeighbors = True |
/usr/local/apache/cgi-bin/hgGeneGraph in buildGraph(conn=<pymysql.connections.Connection object>, gene='C7ORF25', geneCount=25, minSupp=2, addNeighbors=True) |
543 # add the high links back to the graph
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544 for pair, linkData in otherLinks.items():
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=> 545 assert(pair not in graphLinks)
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546 graphLinks[pair] = linkData
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547
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pair = ('BRD4', 'C7orf25'), graphLinks = defaultdict(<class 'set'>, {('BRD4', 'C7orf25'):...: (0, ['intact', 'biogrid'], ['ppi'], 2745, '')}) |