![[ICO]](/icons/blank.gif){kind=icon}
![[PARENTDIR]](/icons/back.gif){kind=icon}
![[ ]](/icons/unknown.gif){kind=icon}
![[TXT]](/icons/text.gif){kind=icon}
![[ ]](/icons/p.gif){kind=icon}
![[DIR]](/icons/folder.gif){kind=icon}
| Name | Last modified | Size | Description |
|---|---|---|---|---|
| Parent Directory | - | ||
| hgWiggle | 2026-06-11 12:58 | 11M | |
| liftUp | 2026-06-11 12:57 | 11M | |
| validateFiles | 2026-06-11 12:57 | 11M | |
| pslCDnaFilter | 2026-06-11 12:57 | 11M | |
| hubCheck | 2026-06-11 12:58 | 11M | |
| featureBits | 2026-06-11 12:57 | 11M | |
| overlapSelect | 2026-06-11 12:58 | 11M | |
| gff3ToGenePred | 2026-06-11 12:58 | 11M | |
| hgLoadBed | 2026-06-11 12:58 | 11M | |
| tdbQuery | 2026-06-11 12:58 | 11M | |
| genePredToMafFrames | 2026-06-11 12:57 | 11M | |
| hgLoadMafSummary | 2026-06-11 12:58 | 11M | |
| clusterGenes | 2026-06-11 12:57 | 11M | |
| hgLoadOut | 2026-06-11 12:58 | 11M | |
| netClass | 2026-06-11 12:58 | 11M | |
| estOrient | 2026-06-11 12:57 | 11M | |
| dbTrash | 2026-06-11 12:57 | 11M | |
| hgTrackDb | 2026-06-11 12:58 | 11M | |
| hgLoadMaf | 2026-06-11 12:58 | 11M | |
| hgLoadOutJoined | 2026-06-11 12:58 | 11M | |
| hgGoldGapGl | 2026-06-11 12:58 | 11M | |
| mafCoverage | 2026-06-11 12:57 | 11M | |
| hgLoadNet | 2026-06-11 12:58 | 11M | |
| hgLoadWiggle | 2026-06-11 12:58 | 11M | |
| mafGene | 2026-06-11 12:58 | 11M | |
| hgLoadChain | 2026-06-11 12:58 | 11M | |
| raSqlQuery | 2026-06-11 12:58 | 11M | |
| checkTableCoords | 2026-06-11 12:57 | 11M | |
| transMapPslToGenePred | 2026-06-11 12:58 | 11M | |
| ldHgGene | 2026-06-11 12:58 | 11M | |
| bedCoverage | 2026-06-11 12:57 | 11M | |
| genePredToBigGenePred | 2026-06-11 12:58 | 11M | |
| getRnaPred | 2026-06-11 12:57 | 11M | |
| bigChainToChain | 2026-06-11 12:58 | 11M | |
| bigGenePredToGenePred | 2026-06-11 12:58 | 11M | |
| pslToBigPsl | 2026-06-11 12:58 | 11M | |
| genePredSingleCover | 2026-06-11 12:57 | 11M | |
| pslLiftSubrangeBlat | 2026-06-11 12:58 | 11M | |
| hgLoadGap | 2026-06-11 12:58 | 11M | |
| mrnaToGene | 2026-06-11 12:57 | 11M | |
| hubClone | 2026-06-11 12:58 | 11M | |
| hgGcPercent | 2026-06-11 12:58 | 11M | |
| gapToLift | 2026-06-11 12:58 | 11M | |
| pslCheck | 2026-06-11 12:57 | 11M | |
| checkHgFindSpec | 2026-06-11 12:57 | 11M | |
| hgFindSpec | 2026-06-11 12:58 | 11M | |
| gtfToGenePred | 2026-06-11 12:58 | 11M | |
| genePredToGtf | 2026-06-11 12:57 | 11M | |
| bedItemOverlapCount | 2026-06-11 12:57 | 11M | |
| liftOver | 2026-06-11 12:57 | 11M | |
| makeTableList | 2026-06-11 12:58 | 11M | |
| getRna | 2026-06-11 12:57 | 11M | |
| checkCoverageGaps | 2026-06-11 12:57 | 11M | |
| genePredHisto | 2026-06-11 12:57 | 11M | |
| mafSplitPos | 2026-06-11 12:58 | 11M | |
| fixTrackDb | 2026-06-11 12:58 | 11M | |
| genePredToBed | 2026-06-11 12:57 | 11M | |
| bedExtendRanges | 2026-06-11 12:58 | 11M | |
| hubPublicCheck | 2026-06-11 12:58 | 11M | |
| genePredFilter | 2026-06-11 12:58 | 11M | |
| genePredCheck | 2026-06-11 12:57 | 11M | |
| bedToGenePred | 2026-06-11 12:57 | 11M | |
| genePredToProt | 2026-06-11 12:58 | 11M | |
| mafFrag | 2026-06-11 12:58 | 11M | |
| genePredToFakePsl | 2026-06-11 12:57 | 11M | |
| chromGraphFromBin | 2026-06-11 12:58 | 11M | |
| hgvsToVcf | 2026-06-11 12:58 | 11M | |
| dbDbToHubTxt | 2026-06-11 12:58 | 11M | |
| chromGraphToBin | 2026-06-11 12:58 | 11M | |
| mafToSnpBed | 2026-06-11 12:57 | 11M | |
| hgSpeciesRna | 2026-06-11 12:57 | 11M | |
| mafFrags | 2026-06-11 12:58 | 11M | |
| hicInfo | 2026-06-11 12:58 | 11M | |
| binFromRange | 2026-06-11 12:58 | 11M | |
| mafFetch | 2026-06-11 12:58 | 11M | |
| positionalTblCheck | 2026-06-11 12:58 | 11M | |
| bedToBigBed | 2026-06-11 12:56 | 8.5M | |
| wigCorrelate | 2026-06-11 12:57 | 8.5M | |
| wigToBigWig | 2026-06-11 12:57 | 8.5M | |
| bigWigCat | 2026-06-11 12:56 | 8.5M | |
| twoBitMask | 2026-06-11 12:58 | 8.5M | |
| bedGraphToBigWig | 2026-06-11 12:56 | 8.5M | |
| bedClip | 2026-06-11 12:56 | 8.5M | |
| bigPslToPsl | 2026-06-11 12:58 | 8.5M | |
| bigWigToBedGraph | 2026-06-11 12:56 | 8.5M | |
| bigWigToWig | 2026-06-11 12:56 | 8.5M | |
| bigWigCorrelate | 2026-06-11 12:56 | 8.5M | |
| bigBedToBed | 2026-06-11 12:56 | 8.5M | |
| bigMafToMaf | 2026-06-11 12:58 | 8.5M | |
| oligoMatch | 2026-06-11 12:58 | 8.5M | |
| bigBedNamedItems | 2026-06-11 12:56 | 8.5M | |
| bigWigAverageOverBed | 2026-06-11 12:56 | 8.5M | |
| twoBitToFa | 2026-06-11 12:57 | 8.5M | |
| bigChainBreaks | 2026-06-11 12:58 | 8.5M | |
| bigBedSummary | 2026-06-11 12:56 | 8.5M | |
| bigBedInfo | 2026-06-11 12:56 | 8.5M | |
| lavToPsl | 2026-06-11 12:57 | 8.5M | |
| mafSplit | 2026-06-11 12:58 | 8.5M | |
| maskOutFa | 2026-06-11 12:57 | 8.5M | |
| mafsInRegion | 2026-06-11 12:57 | 8.5M | |
| bedWeedOverlapping | 2026-06-11 12:58 | 8.5M | |
| pslToBed | 2026-06-11 12:57 | 8.5M | |
| bedToPsl | 2026-06-11 12:58 | 8.5M | |
| bedPartition | 2026-06-11 12:58 | 8.5M | |
| bedGeneParts | 2026-06-11 12:56 | 8.5M | |
| liftOverMerge | 2026-06-11 12:57 | 8.5M | |
| bedMergeAdjacent | 2026-06-11 12:58 | 8.5M | |
| bedToExons | 2026-06-11 12:57 | 8.5M | |
| ameme | 2026-06-11 12:58 | 8.5M | |
| bedSort | 2026-06-11 12:57 | 8.5M | |
| mafToBigMafSummary | 2026-06-11 12:58 | 6.5M | |
| dbSnoop | 2026-06-11 12:58 | 6.5M | |
| hgLoadSqlTab | 2026-06-11 12:58 | 6.5M | |
| sqlToXml | 2026-06-11 12:57 | 6.5M | |
| hgBbiDbLink | 2026-06-11 12:58 | 6.5M | |
| hgsql | 2026-06-11 12:57 | 6.5M | |
| hgsqldump | 2026-06-11 12:57 | 6.5M | |
| blastXmlToPsl | 2026-06-11 12:57 | 6.4M | |
| axtChain | 2026-06-11 12:57 | 6.3M | |
| pslPretty | 2026-06-11 12:57 | 6.3M | |
| chainCleaner | 2026-06-11 12:57 | 6.3M | |
| pslRecalcMatch | 2026-06-11 12:57 | 6.3M | |
| pslToPslx | 2026-06-11 12:57 | 6.3M | |
| paraHub | 2026-06-11 12:57 | 6.3M | |
| gff3ToPsl | 2026-06-11 12:58 | 6.3M | |
| pslSpliceJunctions | 2026-06-11 12:56 | 6.3M | |
| pslMap | 2026-06-11 12:56 | 6.3M | |
| bamToPsl | 2026-06-11 12:56 | 6.3M | |
| para | 2026-06-11 12:57 | 6.3M | |
| axtToPsl | 2026-06-11 12:57 | 6.3M | |
| blastToPsl | 2026-06-11 12:57 | 6.3M | |
| pslMrnaCover | 2026-06-11 12:58 | 6.3M | |
| mafToPsl | 2026-06-11 12:58 | 6.3M | |
| rmskAlignToPsl | 2026-06-11 12:58 | 6.3M | |
| faFilterN | 2026-06-11 12:56 | 6.3M | |
| chainToPslBasic | 2026-06-11 12:57 | 6.3M | |
| pslToChain | 2026-06-11 12:57 | 6.3M | |
| pslPairs | 2026-06-11 12:57 | 6.3M | |
| chainToMaf | 2026-06-11 12:57 | 6.3M | |
| pslReps | 2026-06-11 12:57 | 6.3M | |
| pslProtToRnaCoords | 2026-06-11 12:56 | 6.3M | |
| pslSort | 2026-06-11 12:57 | 6.3M | |
| chainScore | 2026-06-11 12:57 | 6.3M | |
| pslStats | 2026-06-11 12:57 | 6.3M | |
| pslHisto | 2026-06-11 12:57 | 6.3M | |
| chainBridge | 2026-06-11 12:57 | 6.3M | |
| pslSelect | 2026-06-11 12:57 | 6.3M | |
| pslMapPostChain | 2026-06-11 12:56 | 6.3M | |
| pslSomeRecords | 2026-06-11 12:57 | 6.3M | |
| pslSplitOnTarget | 2026-06-11 12:57 | 6.3M | |
| pslPartition | 2026-06-11 12:57 | 6.3M | |
| pslSwap | 2026-06-11 12:57 | 6.3M | |
| pslRc | 2026-06-11 12:56 | 6.3M | |
| pslRemoveFrameShifts | 2026-06-11 12:56 | 6.3M | |
| pslPosTarget | 2026-06-11 12:56 | 6.3M | |
| pslScore | 2026-06-11 12:56 | 6.3M | |
| pslxToFa | 2026-06-11 12:57 | 6.3M | |
| netToAxt | 2026-06-11 12:58 | 6.3M | |
| lavToAxt | 2026-06-11 12:57 | 6.2M | |
| pslFilter | 2026-06-11 12:57 | 6.2M | |
| pslSortAcc | 2026-06-11 12:57 | 6.2M | |
| pslDropOverlap | 2026-06-11 12:57 | 6.2M | |
| pslCat | 2026-06-11 12:57 | 6.2M | |
| chainToAxt | 2026-06-11 12:57 | 6.2M | |
| checkAgpAndFa | 2026-06-11 12:57 | 6.2M | |
| parasol | 2026-06-11 12:57 | 6.2M | |
| chainToPsl | 2026-06-11 12:57 | 6.2M | |
| findMotif | 2026-06-11 12:56 | 6.2M | |
| faSize | 2026-06-11 12:56 | 6.2M | |
| faCount | 2026-06-11 12:56 | 6.2M | |
| tabToTabDir | 2026-06-11 12:58 | 6.2M | |
| vcfToBed | 2026-06-11 12:58 | 6.2M | |
| chainAntiRepeat | 2026-06-11 12:57 | 6.2M | |
| autoSql | 2026-06-11 12:57 | 6.2M | |
| qacAgpLift | 2026-06-11 12:57 | 6.2M | |
| mafAddIRowsStream | 2026-06-11 12:58 | 6.2M | |
| mafAddIRows | 2026-06-11 12:58 | 6.2M | |
| paraNode | 2026-06-11 12:57 | 6.2M | |
| faAlign | 2026-06-11 12:56 | 6.2M | |
| chainToBigChain | 2026-06-11 12:58 | 6.2M | |
| bigWigMerge | 2026-06-11 12:56 | 6.2M | |
| bigWigInfo | 2026-06-11 12:56 | 6.2M | |
| bigWigSummary | 2026-06-11 12:56 | 6.2M | |
| faToTwoBit | 2026-06-11 12:56 | 6.2M | |
| mafAddQRows | 2026-06-11 12:58 | 6.2M | |
| xmlToSql | 2026-06-11 12:57 | 6.2M | |
| axtToMaf | 2026-06-11 12:57 | 6.2M | |
| mafToAxt | 2026-06-11 12:58 | 6.2M | |
| fastqStatsAndSubsample | 2026-06-11 12:56 | 6.2M | |
| paraNodeStatus | 2026-06-11 12:57 | 6.2M | |
| strexCalc | 2026-06-11 12:57 | 6.2M | |
| chainNet | 2026-06-11 12:57 | 6.2M | |
| validateManifest | 2026-06-11 12:57 | 6.2M | |
| twoBitDup | 2026-06-11 12:57 | 6.2M | |
| ixIxx | 2026-06-11 12:58 | 6.2M | |
| trfBig | 2026-06-11 12:57 | 6.2M | |
| paraHubStop | 2026-06-11 12:57 | 6.2M | |
| paraNodeStop | 2026-06-11 12:57 | 6.2M | |
| twoBitInfo | 2026-06-11 12:57 | 6.2M | |
| faSplit | 2026-06-11 12:56 | 6.2M | |
| gencodeVersionForGenes | 2026-06-11 12:58 | 6.2M | |
| faToVcf | 2026-06-11 12:58 | 6.2M | |
| qacToWig | 2026-06-11 12:57 | 6.2M | |
| qacToQa | 2026-06-11 12:57 | 6.2M | |
| nibFrag | 2026-06-11 12:56 | 6.2M | |
| mafFilter | 2026-06-11 12:58 | 6.2M | |
| bigWigCluster | 2026-06-11 12:56 | 6.2M | |
| crTreeIndexBed | 2026-06-11 12:58 | 6.2M | |
| crTreeSearchBed | 2026-06-11 12:58 | 6.2M | |
| axtSwap | 2026-06-11 12:57 | 6.2M | |
| axtSort | 2026-06-11 12:57 | 6.2M | |
| autoDtd | 2026-06-11 12:57 | 6.2M | |
| qaToQac | 2026-06-11 12:57 | 6.2M | |
| faFilter | 2026-06-11 12:56 | 6.2M | |
| netChainSubset | 2026-06-11 12:58 | 6.2M | |
| faNoise | 2026-06-11 12:56 | 6.2M | |
| matrixClusterColumns | 2026-06-11 12:56 | 6.2M | |
| faToTab | 2026-06-11 12:56 | 6.2M | |
| faTrans | 2026-06-11 12:56 | 6.2M | |
| hgFakeAgp | 2026-06-11 12:58 | 6.2M | |
| faRandomize | 2026-06-11 12:56 | 6.2M | |
| faCmp | 2026-06-11 12:56 | 6.2M | |
| matrixNormalize | 2026-06-11 12:56 | 6.2M | |
| faFrag | 2026-06-11 12:56 | 6.2M | |
| mafRanges | 2026-06-11 12:58 | 6.2M | |
| netSyntenic | 2026-06-11 12:58 | 6.2M | |
| autoXml | 2026-06-11 12:57 | 6.2M | |
| chainMergeSort | 2026-06-11 12:57 | 6.2M | |
| mafSpeciesSubset | 2026-06-11 12:57 | 6.2M | |
| mafMeFirst | 2026-06-11 12:58 | 6.2M | |
| mafToBigMaf | 2026-06-11 12:58 | 6.2M | |
| mafSpeciesList | 2026-06-11 12:58 | 6.2M | |
| mafOrder | 2026-06-11 12:58 | 6.2M | |
| mafNoAlign | 2026-06-11 12:58 | 6.2M | |
| chainFilter | 2026-06-11 12:57 | 6.2M | |
| netFilter | 2026-06-11 12:58 | 6.2M | |
| xmlCat | 2026-06-11 12:57 | 6.2M | |
| faToFastq | 2026-06-11 12:56 | 6.2M | |
| wigEncode | 2026-06-11 12:58 | 6.2M | |
| faPolyASizes | 2026-06-11 12:56 | 6.2M | |
| paraSync | 2026-06-11 12:56 | 6.2M | |
| paraFetch | 2026-06-11 12:56 | 6.2M | |
| chainPreNet | 2026-06-11 12:57 | 6.2M | |
| chainSplit | 2026-06-11 12:57 | 6.2M | |
| chainStitchId | 2026-06-11 12:57 | 6.2M | |
| chainSort | 2026-06-11 12:57 | 6.2M | |
| chainSwap | 2026-06-11 12:57 | 6.2M | |
| faRc | 2026-06-11 12:56 | 6.2M | |
| bedIntersect | 2026-06-11 12:57 | 6.2M | |
| nibSize | 2026-06-11 12:56 | 6.2M | |
| raToTab | 2026-06-11 12:57 | 6.2M | |
| netToBed | 2026-06-11 12:58 | 6.2M | |
| htmlCheck | 2026-06-11 12:56 | 6.2M | |
| netSplit | 2026-06-11 12:58 | 6.2M | |
| matrixToBarChartBed | 2026-06-11 12:56 | 6.2M | |
| gensub2 | 2026-06-11 12:57 | 6.2M | |
| textHistogram | 2026-06-11 12:57 | 6.2M | |
| newProg | 2026-06-11 12:56 | 6.2M | |
| clusterMatrixToBarChartBed | 2026-06-11 12:56 | 6.2M | |
| fastqToFa | 2026-06-11 12:56 | 6.2M | |
| chopFaLines | 2026-06-11 12:56 | 6.2M | |
| rmFaDups | 2026-06-11 12:57 | 6.2M | |
| wordLine | 2026-06-11 12:57 | 6.2M | |
| ave | 2026-06-11 12:56 | 6.2M | |
| rowsToCols | 2026-06-11 12:57 | 6.2M | |
| spacedToTab | 2026-06-11 12:57 | 6.2M | |
| splitFileByColumn | 2026-06-11 12:57 | 6.2M | |
| matrixMarketToTsv | 2026-06-11 12:56 | 6.2M | |
| subColumn | 2026-06-11 12:57 | 6.2M | |
| paraTestJob | 2026-06-11 12:57 | 6.2M | |
| bedCommonRegions | 2026-06-11 12:56 | 6.2M | |
| paraNodeStart | 2026-06-11 12:57 | 6.2M | |
| bedRestrictToPositions | 2026-06-11 12:56 | 6.2M | |
| newPythonProg | 2026-06-11 12:56 | 6.2M | |
| faSomeRecords | 2026-06-11 12:56 | 6.2M | |
| bedRemoveOverlap | 2026-06-11 12:56 | 6.2M | |
| randomLines | 2026-06-11 12:57 | 6.2M | |
| bedPileUps | 2026-06-11 12:56 | 6.2M | |
| stringify | 2026-06-11 12:57 | 6.2M | |
| tabFmt | 2026-06-11 12:57 | 6.2M | |
| addCols | 2026-06-11 12:56 | 6.2M | |
| tickToDate | 2026-06-11 12:57 | 6.2M | |
| calc | 2026-06-11 12:56 | 6.2M | |
| bedJoinTabOffset | 2026-06-11 12:56 | 6.2M | |
| raToLines | 2026-06-11 12:57 | 6.2M | |
| linesToRa | 2026-06-11 12:57 | 6.2M | |
| bedGraphPack | 2026-06-11 12:56 | 6.2M | |
| headRest | 2026-06-11 12:56 | 6.2M | |
| subChar | 2026-06-11 12:57 | 6.2M | |
| catDir | 2026-06-11 12:56 | 6.2M | |
| countChars | 2026-06-11 12:56 | 6.2M | |
| splitFile | 2026-06-11 12:57 | 6.2M | |
| endsInLf | 2026-06-11 12:56 | 6.2M | |
| faOneRecord | 2026-06-11 12:56 | 6.2M | |
| catUncomment | 2026-06-11 12:56 | 6.2M | |
| colTransform | 2026-06-11 12:56 | 6.2M | |
| tailLines | 2026-06-11 12:57 | 6.2M | |
| aveCols | 2026-06-11 12:56 | 6.2M | |
| toUpper | 2026-06-11 12:57 | 6.2M | |
| toLower | 2026-06-11 12:57 | 6.2M | |
| lastz_D-1.04.00 | 2018-04-06 11:24 | 502K | |
| lastz-1.04.00 | 2018-04-06 11:24 | 502K | |
| udr | 2013-08-09 15:59 | 352K | |
| FOOTER.txt | 2026-06-11 13:00 | 344K | |
| hubtools | 2026-06-11 09:06 | 80K | |
| trackDbIndexBb | 2026-06-11 09:06 | 19K | |
| cpg_lh | 2026-06-11 12:56 | 18K | |
| bigHeat | 2026-06-11 09:06 | 17K | |
| expMatrixToBarchartBed | 2026-06-11 09:06 | 16K | |
| vai.pl | 2026-06-11 09:06 | 12K | |
| chromToUcsc | 2026-06-11 09:06 | 11K | |
| bigGuessDb | 2026-06-11 09:06 | 10K | |
| webSync | 2026-06-11 09:06 | 10K | |
| mktime | 2026-06-11 12:57 | 8.9K | |
| localtime | 2026-06-11 12:57 | 8.9K | |
| gmtime | 2026-06-11 12:57 | 8.8K | |
| sizeof | 2026-06-11 12:57 | 8.6K | |
| genePredCompare | 2026-03-20 13:15 | 6.6K | |
| ucscApiClient | 2026-06-11 09:06 | 4.8K | |
| bedJoinTabOffset.py | 2026-06-11 09:06 | 4.3K | |
| tdbSort | 2026-06-11 09:06 | 4.2K | |
| tdbRename | 2026-06-11 09:06 | 3.1K | |
| fetchChromSizes | 2026-06-11 09:06 | 3.0K | |
| README.txt | 2026-06-11 13:33 | 2.0K | |
| varStepToBedGraph.pl | 2026-06-11 12:58 | 1.7K | |
| fixStepToBedGraph.pl | 2026-06-11 12:58 | 1.4K | |
| barChartMaxLimit | 2026-06-11 09:06 | 1.0K | |
| blat/ | 2026-06-11 13:03 | - | |